RNA–Protein interactions for RNA: ENST00000298396.6

SSX3-201, Transcript of SSX family member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSX3, Length 1,232 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX3-201ENST00000298396 ZIM2Q9NZV7 527 aa5.48□□□□□ -1.53
SSX3-201ENST00000298396 ERVK-19Q9WJR5 959 aa5.48□□□□□ -1.53
SSX3-201ENST00000298396 POLHQ9Y253 713 aa5.48□□□□□ -1.53
SSX3-201ENST00000298396 MAN2B2Q9Y2E5 1009 aa5.48□□□□□ -1.53
SSX3-201ENST00000298396 WBP11Q9Y2W2 641 aaKnown RBP5.48□□□□□ -1.53
SSX3-201ENST00000298396 SPACA6W5XKT8 324 aa5.48□□□□□ -1.53
SSX3-201ENST00000298396 RP1L1Q8IWN7 2480 aaPredicted RBP5.48□□□□□ -1.53
SSX3-201ENST00000298396 GIMAP1-GIMAP5A0A087WTJ2 511 aa5.47□□□□□ -1.53
SSX3-201ENST00000298396 NSG1A0A0A6YYJ2 146 aa5.47□□□□□ -1.53
SSX3-201ENST00000298396 PCDH17O14917 1159 aa5.47□□□□□ -1.53
SSX3-201ENST00000298396 RGS13O14921 159 aa5.47□□□□□ -1.53
SSX3-201ENST00000298396 GUCY1B2O75343 617 aa5.47□□□□□ -1.53
SSX3-201ENST00000298396 SLC22A3O75751 556 aa5.47□□□□□ -1.53
SSX3-201ENST00000298396 C6orf47O95873 294 aa5.47□□□□□ -1.53
SSX3-201ENST00000298396 IFNA16P05015 189 aa5.47□□□□□ -1.53
SSX3-201ENST00000298396 IDO1P14902 403 aa5.47□□□□□ -1.53
SSX3-201ENST00000298396 CSNK2A2P19784 350 aaPredicted RBP5.47□□□□□ -1.53
SSX3-201ENST00000298396 CAPN3P20807 821 aa5.47□□□□□ -1.53
SSX3-201ENST00000298396 PRPS1L1P21108 318 aa5.47□□□□□ -1.53
SSX3-201ENST00000298396 GALNSP34059 522 aa5.47□□□□□ -1.53
SSX3-201ENST00000298396 HPCAL1P37235 193 aa5.47□□□□□ -1.53
SSX3-201ENST00000298396 MC3RP41968 323 aa5.47□□□□□ -1.53
SSX3-201ENST00000298396 CDKN2CP42773 168 aa5.47□□□□□ -1.53
SSX3-201ENST00000298396 EMDP50402 254 aa5.47□□□□□ -1.53
SSX3-201ENST00000298396 NCBP2P52298 156 aaKnown RBP eCLIP5.47□□□□□ -1.53
SSX3-201ENST00000298396 UCNP55089 124 aa5.47□□□□□ -1.53
SSX3-201ENST00000298396 SLC37A1P57057 533 aa5.47□□□□□ -1.53
SSX3-201ENST00000298396 SOX8P57073 446 aa5.47□□□□□ -1.53
SSX3-201ENST00000298396 PLIN5Q00G26 463 aa5.47□□□□□ -1.53
SSX3-201ENST00000298396 ACTN3Q08043 901 aaPredicted RBP5.47□□□□□ -1.53
SSX3-201ENST00000298396 FUT7Q11130 342 aa5.47□□□□□ -1.53
SSX3-201ENST00000298396 MAP4K2Q12851 820 aa5.47□□□□□ -1.53
SSX3-201ENST00000298396 GAB1Q13480 694 aa5.47□□□□□ -1.53
SSX3-201ENST00000298396 RAPSNQ13702 412 aa5.47□□□□□ -1.53
SSX3-201ENST00000298396 SERTAD2Q14140 314 aa5.47□□□□□ -1.53
SSX3-201ENST00000298396 RCAN2Q14206 197 aa5.47□□□□□ -1.53
SSX3-201ENST00000298396 SQLEQ14534 574 aa5.47□□□□□ -1.53
SSX3-201ENST00000298396 ZNF267Q14586 743 aaPredicted RBP5.47□□□□□ -1.53
SSX3-201ENST00000298396 PGS1Q32NB8 556 aa5.47□□□□□ -1.53
SSX3-201ENST00000298396 FAM174BQ3ZCQ3 159 aa5.47□□□□□ -1.53
SSX3-201ENST00000298396 TIGD2Q4W5G0 525 aa5.47□□□□□ -1.53
SSX3-201ENST00000298396 CPTPQ5TA50 214 aa5.47□□□□□ -1.53
SSX3-201ENST00000298396 BROXQ5VW32 411 aa5.47□□□□□ -1.53
SSX3-201ENST00000298396 B3GNTL1Q67FW5 361 aaPredicted RBP5.47□□□□□ -1.53
SSX3-201ENST00000298396 PLAG1Q6DJT9 500 aa5.47□□□□□ -1.53
SSX3-201ENST00000298396 H3F3CQ6NXT2 135 aa5.47□□□□□ -1.53
SSX3-201ENST00000298396 TMEM107Q6UX40 140 aa5.47□□□□□ -1.53
SSX3-201ENST00000298396 C16orf47Q6ZP98 133 aaPredicted RBP5.47□□□□□ -1.53
SSX3-201ENST00000298396 GK5Q6ZS86 529 aa5.47□□□□□ -1.53
SSX3-201ENST00000298396 ANKRD46Q86W74 232 aa5.47□□□□□ -1.53
SSX3-201ENST00000298396 APLFQ8IW19 511 aaPredicted RBP5.47□□□□□ -1.53
SSX3-201ENST00000298396 MSRB3Q8IXL7 192 aa5.47□□□□□ -1.53
SSX3-201ENST00000298396 CLEC4FQ8N1N0 589 aa5.47□□□□□ -1.53
SSX3-201ENST00000298396 MIER2Q8N344 545 aa5.47□□□□□ -1.53
SSX3-201ENST00000298396 GALNT16Q8N428 558 aa5.47□□□□□ -1.53
SSX3-201ENST00000298396 CPSF7Q8N684 471 aaKnown RBP5.47□□□□□ -1.53
SSX3-201ENST00000298396 FAM13CQ8NE31 585 aa5.47□□□□□ -1.53
SSX3-201ENST00000298396 B3GNT7Q8NFL0 401 aa5.47□□□□□ -1.53
SSX3-201ENST00000298396 OR8J2Q8NGG1 315 aa5.47□□□□□ -1.53
SSX3-201ENST00000298396 OR1N1Q8NGS0 311 aa5.47□□□□□ -1.53
SSX3-201ENST00000298396 OR14A16Q8NHC5 309 aa5.47□□□□□ -1.53
SSX3-201ENST00000298396 PSMA8Q8TAA3 256 aa5.47□□□□□ -1.53
SSX3-201ENST00000298396 M1APQ8TC57 530 aa5.47□□□□□ -1.53
SSX3-201ENST00000298396 BRIX1Q8TDN6 353 aaKnown RBP5.47□□□□□ -1.53
SSX3-201ENST00000298396 METTL21AQ8WXB1 218 aa5.47□□□□□ -1.53
SSX3-201ENST00000298396 THAP4Q8WY91 577 aa5.47□□□□□ -1.53
SSX3-201ENST00000298396 EXTL1Q92935 676 aa5.47□□□□□ -1.53
SSX3-201ENST00000298396 VPS33AQ96AX1 596 aa5.47□□□□□ -1.53
SSX3-201ENST00000298396 NACC2Q96BF6 587 aa5.47□□□□□ -1.53
SSX3-201ENST00000298396 PPCDCQ96CD2 204 aa5.47□□□□□ -1.53
SSX3-201ENST00000298396 GIMAP5Q96F15 307 aa5.47□□□□□ -1.53
SSX3-201ENST00000298396 SENP5Q96HI0 755 aaPredicted RBP5.47□□□□□ -1.53
SSX3-201ENST00000298396 FBXL20Q96IG2 436 aa5.47□□□□□ -1.53
SSX3-201ENST00000298396 COX4I2Q96KJ9 171 aa5.47□□□□□ -1.53
SSX3-201ENST00000298396 DGAT2Q96PD7 388 aa5.47□□□□□ -1.53
SSX3-201ENST00000298396 CCT8L2Q96SF2 557 aa5.47□□□□□ -1.53
SSX3-201ENST00000298396 INPP5KQ9BT40 448 aa5.47□□□□□ -1.53
SSX3-201ENST00000298396 TUBB6Q9BUF5 446 aa5.47□□□□□ -1.53
SSX3-201ENST00000298396 DUSP26Q9BV47 211 aa5.47□□□□□ -1.53
SSX3-201ENST00000298396 OR8D2Q9GZM6 311 aa5.47□□□□□ -1.53
SSX3-201ENST00000298396 NMUR2Q9GZQ4 415 aa5.47□□□□□ -1.53
SSX3-201ENST00000298396 ING2Q9H160 280 aa5.47□□□□□ -1.53
SSX3-201ENST00000298396 MYLK2Q9H1R3 596 aa5.47□□□□□ -1.53
SSX3-201ENST00000298396 SERHL2Q9H4I8 314 aa5.47□□□□□ -1.53
SSX3-201ENST00000298396 CXorf36Q9H7Y0 433 aa5.47□□□□□ -1.53
SSX3-201ENST00000298396 LIN28AQ9H9Z2 209 aaKnown RBP5.47□□□□□ -1.53
SSX3-201ENST00000298396 ZBTB20Q9HC78 741 aaPredicted RBP5.47□□□□□ -1.53
SSX3-201ENST00000298396 MMP25Q9NPA2 562 aa5.47□□□□□ -1.53
SSX3-201ENST00000298396 MIEF1Q9NQG6 463 aa5.47□□□□□ -1.53
SSX3-201ENST00000298396 PFDN4Q9NQP4 134 aa5.47□□□□□ -1.53
SSX3-201ENST00000298396 SH3BP4Q9P0V3 963 aa5.47□□□□□ -1.53
SSX3-201ENST00000298396 ARMCX1Q9P291 453 aa5.47□□□□□ -1.53
SSX3-201ENST00000298396 C19orf25Q9UFG5 118 aaPredicted RBP5.47□□□□□ -1.53
SSX3-201ENST00000298396 HIVEP3Q5T1R4 2406 aa5.46□□□□□ -1.53
SSX3-201ENST00000298396 PCNX1Q96RV3 2341 aa5.46□□□□□ -1.54
SSX3-201ENST00000298396 TRBV11-1A0A0K0K1C0 115 aa5.46□□□□□ -1.54
SSX3-201ENST00000298396 FAM234BA2RU67 622 aa5.46□□□□□ -1.54
SSX3-201ENST00000298396 A6NL46 340 aa5.46□□□□□ -1.54
SSX3-201ENST00000298396 UPK1AO00322 258 aa5.46□□□□□ -1.54
SSX3-201ENST00000298396 PLOD2O00469 737 aa5.46□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms