RNA–Protein interactions for RNA: ENST00000296026.4

CXCL3-201, Transcript of C-X-C motif chemokine ligand 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CXCL3, Length 1,075 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL3-201ENST00000296026 SETD2Q9BYW2 2564 aaPredicted RBP17.86■□□□□ 0.45
CXCL3-201ENST00000296026 EEF1E1-BLOC1S5C9J1V9 151 aa17.86■□□□□ 0.45
CXCL3-201ENST00000296026 EEF1E1O43324 174 aaKnown RBP17.86■□□□□ 0.45
CXCL3-201ENST00000296026 CBR3O75828 277 aa17.86■□□□□ 0.45
CXCL3-201ENST00000296026 ESRRBO95718 433 aa17.86■□□□□ 0.45
CXCL3-201ENST00000296026 CYP4B1P13584 511 aa17.86■□□□□ 0.45
CXCL3-201ENST00000296026 PCSK2P16519 638 aa17.86■□□□□ 0.45
CXCL3-201ENST00000296026 DNASE1P24855 282 aa17.86■□□□□ 0.45
CXCL3-201ENST00000296026 HSD17B3P37058 310 aa17.86■□□□□ 0.45
CXCL3-201ENST00000296026 EMDP50402 254 aa17.86■□□□□ 0.45
CXCL3-201ENST00000296026 CLCQ05315 142 aa17.86■□□□□ 0.45
CXCL3-201ENST00000296026 TCHHL1Q5QJ38 904 aaPredicted RBP17.86■□□□□ 0.45
CXCL3-201ENST00000296026 CDYL2Q8N8U2 506 aa17.86■□□□□ 0.45
CXCL3-201ENST00000296026 WDSUB1Q8N9V3 476 aa17.86■□□□□ 0.45
CXCL3-201ENST00000296026 C9orf106Q8NAJ2 232 aa17.86■□□□□ 0.45
CXCL3-201ENST00000296026 OR14L1PQ8NHC6 308 aa17.86■□□□□ 0.45
CXCL3-201ENST00000296026 RDH11Q8TC12 318 aa17.86■□□□□ 0.45
CXCL3-201ENST00000296026 PFDN4Q9NQP4 134 aa17.86■□□□□ 0.45
CXCL3-201ENST00000296026 HEY2Q9UBP5 337 aa17.86■□□□□ 0.45
CXCL3-201ENST00000296026 UTS2RQ9UKP6 389 aa17.86■□□□□ 0.45
CXCL3-201ENST00000296026 PRAMEF25A6NGN4 478 aa17.85■□□□□ 0.45
CXCL3-201ENST00000296026 FRG2CA6NGY1 282 aa17.85■□□□□ 0.45
CXCL3-201ENST00000296026 MANBAO00462 879 aa17.85■□□□□ 0.45
CXCL3-201ENST00000296026 IL18BPO95998 194 aa17.85■□□□□ 0.45
CXCL3-201ENST00000296026 EPXP11678 715 aa17.85■□□□□ 0.45
CXCL3-201ENST00000296026 CPN1P15169 458 aa17.85■□□□□ 0.45
CXCL3-201ENST00000296026 SLCO1A2P46721 670 aa17.85■□□□□ 0.45
CXCL3-201ENST00000296026 PRRC2AP48634 2157 aaKnown RBP17.85■□□□□ 0.45
CXCL3-201ENST00000296026 ITPR3Q14573 2671 aa17.85■□□□□ 0.45
CXCL3-201ENST00000296026 WHAMMP3Q1A5X7 153 aa17.85■□□□□ 0.45
CXCL3-201ENST00000296026 FBXW10Q5XX13 1052 aa17.85■□□□□ 0.45
CXCL3-201ENST00000296026 MMGT1Q8N4V1 131 aa17.85■□□□□ 0.45
CXCL3-201ENST00000296026 LINC01560Q8TB33 94 aa17.85■□□□□ 0.45
CXCL3-201ENST00000296026 TMBIM1Q969X1 311 aa17.85■□□□□ 0.45
CXCL3-201ENST00000296026 TUBA1CQ9BQE3 449 aa17.85■□□□□ 0.45
CXCL3-201ENST00000296026 OR2B2Q9GZK3 357 aa17.85■□□□□ 0.45
CXCL3-201ENST00000296026 JKAMPQ9P055 326 aa17.85■□□□□ 0.45
CXCL3-201ENST00000296026 MCM8Q9UJA3 840 aa17.85■□□□□ 0.45
CXCL3-201ENST00000296026 GPR55Q9Y2T6 319 aaPredicted RBP17.85■□□□□ 0.45
CXCL3-201ENST00000296026 ANKHD1Q8IWZ3 2542 aaKnown RBP17.84■□□□□ 0.45
CXCL3-201ENST00000296026 A0A087WUV0 522 aaPredicted RBP17.84■□□□□ 0.45
CXCL3-201ENST00000296026 TO15178 435 aa17.84■□□□□ 0.45
CXCL3-201ENST00000296026 REM1O75628 298 aa17.84■□□□□ 0.45
CXCL3-201ENST00000296026 SUPT7LO94864 414 aa17.84■□□□□ 0.45
CXCL3-201ENST00000296026 KRT6AP02538 564 aa17.84■□□□□ 0.45
CXCL3-201ENST00000296026 KRT6BP04259 564 aa17.84■□□□□ 0.45
CXCL3-201ENST00000296026 SNRPAP09012 282 aaKnown RBP17.84■□□□□ 0.45
CXCL3-201ENST00000296026 TMIGD3P0DMS9 266 aaPredicted RBP17.84■□□□□ 0.45
CXCL3-201ENST00000296026 HSD3B1P14060 373 aa17.84■□□□□ 0.45
CXCL3-201ENST00000296026 CHN1P15882 459 aa17.84■□□□□ 0.45
CXCL3-201ENST00000296026 KLK2P20151 261 aa17.84■□□□□ 0.45
CXCL3-201ENST00000296026 HSD3B2P26439 372 aa17.84■□□□□ 0.45
CXCL3-201ENST00000296026 ECHS1P30084 290 aa17.84■□□□□ 0.45
CXCL3-201ENST00000296026 KRT6CP48668 564 aa17.84■□□□□ 0.45
CXCL3-201ENST00000296026 DGKQP52824 942 aa17.84■□□□□ 0.45
CXCL3-201ENST00000296026 PPP2R2AP63151 447 aa17.84■□□□□ 0.45
CXCL3-201ENST00000296026 SRYQ05066 204 aa17.84■□□□□ 0.45
CXCL3-201ENST00000296026 RASA2Q15283 850 aa17.84■□□□□ 0.45
CXCL3-201ENST00000296026 ENPP6Q6UWR7 440 aa17.84■□□□□ 0.45
CXCL3-201ENST00000296026 TRIM42Q8IWZ5 723 aa17.84■□□□□ 0.45
CXCL3-201ENST00000296026 CCDC116Q8IYX3 515 aa17.84■□□□□ 0.45
CXCL3-201ENST00000296026 NOA1Q8NC60 698 aaKnown RBP17.84■□□□□ 0.45
CXCL3-201ENST00000296026 ZNF675Q8TD23 568 aa17.84■□□□□ 0.45
CXCL3-201ENST00000296026 TMCO6Q96DC7 493 aa17.84■□□□□ 0.45
CXCL3-201ENST00000296026 COL21A1Q96P44 957 aa17.84■□□□□ 0.45
CXCL3-201ENST00000296026 ANKRA2Q9H9E1 313 aa17.84■□□□□ 0.45
CXCL3-201ENST00000296026 DLGAP4Q9Y2H0 992 aa17.84■□□□□ 0.45
CXCL3-201ENST00000296026 DOCK7Q96N67 2140 aa17.84■□□□□ 0.45
CXCL3-201ENST00000296026 OR6C70A6NIJ9 312 aa17.83■□□□□ 0.44
CXCL3-201ENST00000296026 H0Y3Z8 333 aa17.83■□□□□ 0.44
CXCL3-201ENST00000296026 NME6O75414 186 aaPredicted RBP17.83■□□□□ 0.44
CXCL3-201ENST00000296026 IL3P08700 152 aa17.83■□□□□ 0.44
CXCL3-201ENST00000296026 TAC1P20366 129 aa17.83■□□□□ 0.44
CXCL3-201ENST00000296026 SORDQ00796 357 aa17.83■□□□□ 0.44
CXCL3-201ENST00000296026 HMGCS1Q01581 520 aa17.83■□□□□ 0.44
CXCL3-201ENST00000296026 FOXF2Q12947 444 aa17.83■□□□□ 0.44
CXCL3-201ENST00000296026 CSTF3Q12996 717 aaKnown RBP17.83■□□□□ 0.44
CXCL3-201ENST00000296026 UNC50Q53HI1 259 aa17.83■□□□□ 0.44
CXCL3-201ENST00000296026 ZNF628Q5EBL2 1059 aa17.83■□□□□ 0.44
CXCL3-201ENST00000296026 ZNF678Q5SXM1 525 aa17.83■□□□□ 0.44
CXCL3-201ENST00000296026 IFNEQ86WN2 208 aa17.83■□□□□ 0.44
CXCL3-201ENST00000296026 KAT2AQ92830 837 aa17.83■□□□□ 0.44
CXCL3-201ENST00000296026 EXOSC8Q96B26 276 aaKnown RBP17.83■□□□□ 0.44
CXCL3-201ENST00000296026 C16orf45Q96MC5 204 aaPredicted RBP17.83■□□□□ 0.44
CXCL3-201ENST00000296026 ALPK1Q96QP1 1244 aa17.83■□□□□ 0.44
CXCL3-201ENST00000296026 TMEM216Q9P0N5 145 aa17.83■□□□□ 0.44
CXCL3-201ENST00000296026 EXOC1LA0A1B0GW35 172 aa17.82■□□□□ 0.44
CXCL3-201ENST00000296026 GNG14A0A1W2PPG7 69 aa17.82■□□□□ 0.44
CXCL3-201ENST00000296026 PCDH7O60245 1069 aa17.82■□□□□ 0.44
CXCL3-201ENST00000296026 ABCB7O75027 752 aa17.82■□□□□ 0.44
CXCL3-201ENST00000296026 ULK1O75385 1050 aa17.82■□□□□ 0.44
CXCL3-201ENST00000296026 ERN1O75460 977 aaKnown RBP17.82■□□□□ 0.44
CXCL3-201ENST00000296026 BCAS2O75934 225 aaPredicted RBP17.82■□□□□ 0.44
CXCL3-201ENST00000296026 CT45A8P0DMV1 189 aa17.82■□□□□ 0.44
CXCL3-201ENST00000296026 CT45A9P0DMV2 189 aa17.82■□□□□ 0.44
CXCL3-201ENST00000296026 DRD2P14416 443 aa17.82■□□□□ 0.44
CXCL3-201ENST00000296026 HMOX2P30519 316 aa17.82■□□□□ 0.44
CXCL3-201ENST00000296026 GFRA1P56159 465 aa17.82■□□□□ 0.44
CXCL3-201ENST00000296026 CORO7P57737 925 aa17.82■□□□□ 0.44
CXCL3-201ENST00000296026 RAE1P78406 368 aaKnown RBP17.82■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms