RNA–Protein interactions for RNA: ENST00000292510.5

VPS28-201, Transcript of VPS28, ESCRT-I subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS28, Length 979 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS28-201ENST00000292510 SLC44A2Q8IWA5 706 aaPredicted RBP12.3□□□□□ -0.44
VPS28-201ENST00000292510 LRRC34Q8IZ02 419 aa12.3□□□□□ -0.44
VPS28-201ENST00000292510 FAM98AQ8NCA5 519 aaKnown RBP12.3□□□□□ -0.44
VPS28-201ENST00000292510 OR4N2Q8NGD1 307 aa12.3□□□□□ -0.44
VPS28-201ENST00000292510 DNAJB8Q8NHS0 232 aa12.3□□□□□ -0.44
VPS28-201ENST00000292510 FBXO30Q8TB52 745 aa12.3□□□□□ -0.44
VPS28-201ENST00000292510 PAQR8Q8TEZ7 354 aa12.3□□□□□ -0.44
VPS28-201ENST00000292510 OMA1Q96E52 524 aa12.3□□□□□ -0.44
VPS28-201ENST00000292510 TEX37Q96LM6 180 aa12.3□□□□□ -0.44
VPS28-201ENST00000292510 MAGEB18Q96M61 343 aa12.3□□□□□ -0.44
VPS28-201ENST00000292510 BTBD9Q96Q07 612 aa12.3□□□□□ -0.44
VPS28-201ENST00000292510 PRPF18Q99633 342 aaKnown RBP12.3□□□□□ -0.44
VPS28-201ENST00000292510 DUSP26Q9BV47 211 aa12.3□□□□□ -0.44
VPS28-201ENST00000292510 DPY30Q9C005 99 aa12.3□□□□□ -0.44
VPS28-201ENST00000292510 EQTNQ9NQ60 294 aa12.3□□□□□ -0.44
VPS28-201ENST00000292510 SIRT3Q9NTG7 399 aaPredicted RBP12.3□□□□□ -0.44
VPS28-201ENST00000292510 SACM1LQ9NTJ5 587 aa12.3□□□□□ -0.44
VPS28-201ENST00000292510 AIG1Q9NVV5 245 aa12.3□□□□□ -0.44
VPS28-201ENST00000292510 ANKUB1A6NFN9 424 aa12.29□□□□□ -0.44
VPS28-201ENST00000292510 NPIPA5E9PKD4 350 aa12.29□□□□□ -0.44
VPS28-201ENST00000292510 ACOX3O15254 700 aa12.29□□□□□ -0.44
VPS28-201ENST00000292510 PPM1BO75688 479 aa12.29□□□□□ -0.44
VPS28-201ENST00000292510 ABCB1P08183 1280 aaPredicted RBP12.29□□□□□ -0.44
VPS28-201ENST00000292510 EDN3P14138 238 aa12.29□□□□□ -0.44
VPS28-201ENST00000292510 DDX5P17844 614 aaKnown RBP12.29□□□□□ -0.44
VPS28-201ENST00000292510 CNR1P21554 472 aa12.29□□□□□ -0.44
VPS28-201ENST00000292510 WNT3P56703 355 aa12.29□□□□□ -0.44
VPS28-201ENST00000292510 UFM1P61960 85 aa12.29□□□□□ -0.44
VPS28-201ENST00000292510 PSG6Q00889 435 aa12.29□□□□□ -0.44
VPS28-201ENST00000292510 ALDH6A1Q02252 535 aaKnown RBP12.29□□□□□ -0.44
VPS28-201ENST00000292510 RPS6KA2Q15349 733 aa12.29□□□□□ -0.44
VPS28-201ENST00000292510 EIF2S3LQ2VIR3 472 aaKnown RBP12.29□□□□□ -0.44
VPS28-201ENST00000292510 LSM12Q3MHD2 195 aaKnown RBP12.29□□□□□ -0.44
VPS28-201ENST00000292510 SLC22A10Q63ZE4 541 aa12.29□□□□□ -0.44
VPS28-201ENST00000292510 EPGNQ6UW88 154 aa12.29□□□□□ -0.44
VPS28-201ENST00000292510 SPATA19Q7Z5L4 167 aa12.29□□□□□ -0.44
VPS28-201ENST00000292510 CAMKMTQ7Z624 323 aa12.29□□□□□ -0.44
VPS28-201ENST00000292510 SIAH3Q8IW03 269 aa12.29□□□□□ -0.44
VPS28-201ENST00000292510 DND1Q8IYX4 353 aaKnown RBP12.29□□□□□ -0.44
VPS28-201ENST00000292510 CLECL1Q8IZS7 167 aa12.29□□□□□ -0.44
VPS28-201ENST00000292510 ZFP62Q8NB50 900 aaPredicted RBP12.29□□□□□ -0.44
VPS28-201ENST00000292510 NUP43Q8NFH3 380 aa12.29□□□□□ -0.44
VPS28-201ENST00000292510 OR2M7Q8NG81 312 aa12.29□□□□□ -0.44
VPS28-201ENST00000292510 ACTRT2Q8TDY3 377 aa12.29□□□□□ -0.44
VPS28-201ENST00000292510 TMBIM1Q969X1 311 aa12.29□□□□□ -0.44
VPS28-201ENST00000292510 HSPBAP1Q96EW2 488 aa12.29□□□□□ -0.44
VPS28-201ENST00000292510 THOC1Q96FV9 657 aaKnown RBP12.29□□□□□ -0.44
VPS28-201ENST00000292510 BHLHE41Q9C0J9 482 aaPredicted RBP12.29□□□□□ -0.44
VPS28-201ENST00000292510 PROK2Q9HC23 129 aa12.29□□□□□ -0.44
VPS28-201ENST00000292510 ATAD3AQ9NVI7 634 aa12.29□□□□□ -0.44
VPS28-201ENST00000292510 TUBA8Q9NY65 449 aaPredicted RBP12.29□□□□□ -0.44
VPS28-201ENST00000292510 CNOT11Q9UKZ1 510 aaKnown RBP12.29□□□□□ -0.44
VPS28-201ENST00000292510 NPIPA1Q9UND3 350 aa12.29□□□□□ -0.44
VPS28-201ENST00000292510 SNX8Q9Y5X2 465 aa12.29□□□□□ -0.44
VPS28-201ENST00000292510 GPR45Q9Y5Y3 372 aa12.29□□□□□ -0.44
VPS28-201ENST00000292510 BAHCC1Q9P281 2608 aa12.29□□□□□ -0.44
VPS28-201ENST00000292510 GIMAP1-GIMAP5A0A087WTJ2 511 aa12.28□□□□□ -0.44
VPS28-201ENST00000292510 FAM166BA8MTA8 275 aa12.28□□□□□ -0.44
VPS28-201ENST00000292510 CAPN14A8MX76 684 aa12.28□□□□□ -0.44
VPS28-201ENST00000292510 TO15178 435 aa12.28□□□□□ -0.44
VPS28-201ENST00000292510 ZNHIT1O43257 154 aa12.28□□□□□ -0.44
VPS28-201ENST00000292510 EMC8O43402 210 aa12.28□□□□□ -0.44
VPS28-201ENST00000292510 HS6ST1O60243 411 aa12.28□□□□□ -0.44
VPS28-201ENST00000292510 ZNF24P17028 368 aa12.28□□□□□ -0.44
VPS28-201ENST00000292510 IL12AP29459 219 aa12.28□□□□□ -0.44
VPS28-201ENST00000292510 TMED10P49755 219 aaKnown RBP12.28□□□□□ -0.44
VPS28-201ENST00000292510 IDH3AP50213 366 aa12.28□□□□□ -0.44
VPS28-201ENST00000292510 AQP5P55064 265 aa12.28□□□□□ -0.44
VPS28-201ENST00000292510 KCNK10P57789 538 aa12.28□□□□□ -0.44
VPS28-201ENST00000292510 PHC1P78364 1004 aa12.28□□□□□ -0.44
VPS28-201ENST00000292510 PLGLB1Q02325 96 aa12.28□□□□□ -0.44
VPS28-201ENST00000292510 KCNC4Q03721 635 aa12.28□□□□□ -0.44
VPS28-201ENST00000292510 MLC1Q15049 377 aa12.28□□□□□ -0.44
VPS28-201ENST00000292510 HSP90B2PQ58FF3 399 aa12.28□□□□□ -0.44
VPS28-201ENST00000292510 SPANXN4Q5MJ08 99 aa12.28□□□□□ -0.44
VPS28-201ENST00000292510 SLC34A3Q8N130 599 aa12.28□□□□□ -0.44
VPS28-201ENST00000292510 FBXW8Q8N3Y1 598 aa12.28□□□□□ -0.44
VPS28-201ENST00000292510 ST6GALNAC3Q8NDV1 305 aa12.28□□□□□ -0.44
VPS28-201ENST00000292510 CEP70Q8NHQ1 597 aa12.28□□□□□ -0.44
VPS28-201ENST00000292510 SPPL2AQ8TCT8 520 aa12.28□□□□□ -0.44
VPS28-201ENST00000292510 OR5P2Q8WZ92 322 aa12.28□□□□□ -0.44
VPS28-201ENST00000292510 DIO2Q92813 273 aa12.28□□□□□ -0.44
VPS28-201ENST00000292510 HGDQ93099 445 aa12.28□□□□□ -0.44
VPS28-201ENST00000292510 FAM120BQ96EK7 910 aaKnown RBP12.28□□□□□ -0.44
VPS28-201ENST00000292510 GIMAP5Q96F15 307 aa12.28□□□□□ -0.44
VPS28-201ENST00000292510 OTUB1Q96FW1 271 aaPredicted RBP12.28□□□□□ -0.44
VPS28-201ENST00000292510 NODALQ96S42 347 aa12.28□□□□□ -0.44
VPS28-201ENST00000292510 FAM173AQ9BQD7 235 aa12.28□□□□□ -0.44
VPS28-201ENST00000292510 EBF4Q9BQW3 602 aa12.28□□□□□ -0.44
VPS28-201ENST00000292510 YIPF4Q9BSR8 244 aa12.28□□□□□ -0.44
VPS28-201ENST00000292510 CLMPQ9H6B4 373 aa12.28□□□□□ -0.44
VPS28-201ENST00000292510 CXorf36Q9H7Y0 433 aa12.28□□□□□ -0.44
VPS28-201ENST00000292510 OR10H1Q9Y4A9 318 aa12.28□□□□□ -0.44
VPS28-201ENST00000292510 EML6Q6ZMW3 1958 aa12.27□□□□□ -0.44
VPS28-201ENST00000292510 GXYLT2A0PJZ3 443 aa12.27□□□□□ -0.45
VPS28-201ENST00000292510 E9PBE3 544 aa12.27□□□□□ -0.45
VPS28-201ENST00000292510 TP53I11O14683 189 aa12.27□□□□□ -0.45
VPS28-201ENST00000292510 TFECO14948 347 aaPredicted RBP12.27□□□□□ -0.45
VPS28-201ENST00000292510 CFLARO15519 480 aa12.27□□□□□ -0.45
VPS28-201ENST00000292510 UGT2B11O75310 529 aa12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms