RNA–Protein interactions for RNA: ENST00000291552.8

U2AF1-201, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene U2AF1, Length 962 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-201ENST00000291552 GPR55Q9Y2T6 319 aaPredicted RBP23.01■■□□□ 1.27
U2AF1-201ENST00000291552 ZNF780BQ9Y6R6 833 aa23.01■■□□□ 1.27
U2AF1-201ENST00000291552 ZNF469Q96JG9 3925 aaPredicted RBP23.01■■□□□ 1.27
U2AF1-201ENST00000291552 PCNX3Q9H6A9 2034 aa23.01■■□□□ 1.27
U2AF1-201ENST00000291552 FRG2CA6NGY1 282 aa23■■□□□ 1.27
U2AF1-201ENST00000291552 ICOSLGO75144 302 aa23■■□□□ 1.27
U2AF1-201ENST00000291552 ULK1O75385 1050 aa23■■□□□ 1.27
U2AF1-201ENST00000291552 ESRRBO95718 433 aa23■■□□□ 1.27
U2AF1-201ENST00000291552 DRD5P21918 477 aa23■■□□□ 1.27
U2AF1-201ENST00000291552 BMP5P22003 454 aa23■■□□□ 1.27
U2AF1-201ENST00000291552 TIMP3P35625 211 aa23■■□□□ 1.27
U2AF1-201ENST00000291552 ZNF136P52737 540 aa23■■□□□ 1.27
U2AF1-201ENST00000291552 SLC29A2Q14542 456 aa23■■□□□ 1.27
U2AF1-201ENST00000291552 CES4AQ5XG92 561 aa23■■□□□ 1.27
U2AF1-201ENST00000291552 SLC30A6Q6NXT4 461 aa23■■□□□ 1.27
U2AF1-201ENST00000291552 YRDCQ86U90 279 aaKnown RBP23■■□□□ 1.27
U2AF1-201ENST00000291552 ZZZ3Q8IYH5 903 aa23■■□□□ 1.27
U2AF1-201ENST00000291552 GBP7Q8N8V2 638 aaPredicted RBP23■■□□□ 1.27
U2AF1-201ENST00000291552 OR1J4Q8NGS1 313 aa23■■□□□ 1.27
U2AF1-201ENST00000291552 OR9A2Q8NGT5 310 aa23■■□□□ 1.27
U2AF1-201ENST00000291552 C16orf78Q8WTQ4 265 aa23■■□□□ 1.27
U2AF1-201ENST00000291552 KAT2AQ92830 837 aa23■■□□□ 1.27
U2AF1-201ENST00000291552 EXOSC8Q96B26 276 aaKnown RBP23■■□□□ 1.27
U2AF1-201ENST00000291552 EBPLQ9BY08 206 aa23■■□□□ 1.27
U2AF1-201ENST00000291552 SERHLQ9NQF3 203 aa23■■□□□ 1.27
U2AF1-201ENST00000291552 PSMC3IPQ9P2W1 217 aaPredicted RBP23■■□□□ 1.27
U2AF1-201ENST00000291552 PRODH2Q9UF12 536 aa23■■□□□ 1.27
U2AF1-201ENST00000291552 FETUBQ9UGM5 382 aa23■■□□□ 1.27
U2AF1-201ENST00000291552 MAPRE3Q9UPY8 281 aa23■■□□□ 1.27
U2AF1-201ENST00000291552 ZFHX3Q15911 3703 aa22.99■■□□□ 1.27
U2AF1-201ENST00000291552 PRRC2AP48634 2157 aaKnown RBP22.99■■□□□ 1.27
U2AF1-201ENST00000291552 PRAMEF25A6NGN4 478 aa22.99■■□□□ 1.27
U2AF1-201ENST00000291552 UBFD1O14562 309 aaKnown RBP22.99■■□□□ 1.27
U2AF1-201ENST00000291552 CDH16O75309 829 aa22.99■■□□□ 1.27
U2AF1-201ENST00000291552 ENO1P06733 434 aaKnown RBP22.99■■□□□ 1.27
U2AF1-201ENST00000291552 RHOXF2BP0C7M4 288 aa22.99■■□□□ 1.27
U2AF1-201ENST00000291552 PYGBP11216 843 aa22.99■■□□□ 1.27
U2AF1-201ENST00000291552 TIA1P31483 386 aaKnown RBP eCLIP22.99■■□□□ 1.27
U2AF1-201ENST00000291552 FOXA1P55317 472 aa22.99■■□□□ 1.27
U2AF1-201ENST00000291552 PKNOX1P55347 436 aa22.99■■□□□ 1.27
U2AF1-201ENST00000291552 DCAF7P61962 342 aa22.99■■□□□ 1.27
U2AF1-201ENST00000291552 ACSM2AQ08AH3 577 aa22.99■■□□□ 1.27
U2AF1-201ENST00000291552 TOMM20Q15388 145 aa22.99■■□□□ 1.27
U2AF1-201ENST00000291552 PRSS53Q2L4Q9 553 aa22.99■■□□□ 1.27
U2AF1-201ENST00000291552 NSUN5P2Q63ZY6 315 aa22.99■■□□□ 1.27
U2AF1-201ENST00000291552 ACSM2BQ68CK6 577 aa22.99■■□□□ 1.27
U2AF1-201ENST00000291552 SCIMPQ6UWF3 145 aa22.99■■□□□ 1.27
U2AF1-201ENST00000291552 NPSR1Q6W5P4 371 aa22.99■■□□□ 1.27
U2AF1-201ENST00000291552 SLC22A9Q8IVM8 553 aa22.99■■□□□ 1.27
U2AF1-201ENST00000291552 IFT20Q8IY31 132 aa22.99■■□□□ 1.27
U2AF1-201ENST00000291552 GSPT2Q8IYD1 628 aaKnown RBP22.99■■□□□ 1.27
U2AF1-201ENST00000291552 PM20D2Q8IYS1 436 aa22.99■■□□□ 1.27
U2AF1-201ENST00000291552 WDSUB1Q8N9V3 476 aa22.99■■□□□ 1.27
U2AF1-201ENST00000291552 ACMSDQ8TDX5 336 aa22.99■■□□□ 1.27
U2AF1-201ENST00000291552 TMBIM1Q969X1 311 aa22.99■■□□□ 1.27
U2AF1-201ENST00000291552 VSTM2LQ96N03 204 aa22.99■■□□□ 1.27
U2AF1-201ENST00000291552 BTBD9Q96Q07 612 aa22.99■■□□□ 1.27
U2AF1-201ENST00000291552 SLC24A3Q9HC58 644 aa22.99■■□□□ 1.27
U2AF1-201ENST00000291552 PFDN4Q9NQP4 134 aa22.99■■□□□ 1.27
U2AF1-201ENST00000291552 B4DXG7 233 aa22.98■■□□□ 1.27
U2AF1-201ENST00000291552 G3V2L1 256 aa22.98■■□□□ 1.27
U2AF1-201ENST00000291552 SYT5O00445 386 aa22.98■■□□□ 1.27
U2AF1-201ENST00000291552 ZWINTO95229 277 aa22.98■■□□□ 1.27
U2AF1-201ENST00000291552 GSTA1P08263 222 aa22.98■■□□□ 1.27
U2AF1-201ENST00000291552 CT45A8P0DMV1 189 aa22.98■■□□□ 1.27
U2AF1-201ENST00000291552 CT45A9P0DMV2 189 aa22.98■■□□□ 1.27
U2AF1-201ENST00000291552 DRD2P14416 443 aa22.98■■□□□ 1.27
U2AF1-201ENST00000291552 ASCL1P50553 236 aa22.98■■□□□ 1.27
U2AF1-201ENST00000291552 CORO7P57737 925 aa22.98■■□□□ 1.27
U2AF1-201ENST00000291552 SNTA1Q13424 505 aa22.98■■□□□ 1.27
U2AF1-201ENST00000291552 CEBPEQ15744 281 aa22.98■■□□□ 1.27
U2AF1-201ENST00000291552 FBXL19-AS1Q494R0 122 aa22.98■■□□□ 1.27
U2AF1-201ENST00000291552 SPIN4Q56A73 249 aa22.98■■□□□ 1.27
U2AF1-201ENST00000291552 CT45A2Q5DJT8 189 aa22.98■■□□□ 1.27
U2AF1-201ENST00000291552 GALNT18Q6P9A2 607 aa22.98■■□□□ 1.27
U2AF1-201ENST00000291552 ABTB1Q969K4 478 aaPredicted RBP22.98■■□□□ 1.27
U2AF1-201ENST00000291552 OR2B2Q9GZK3 357 aa22.98■■□□□ 1.27
U2AF1-201ENST00000291552 KLRF1Q9NZS2 232 aa22.98■■□□□ 1.27
U2AF1-201ENST00000291552 CRIM1Q9NZV1 1036 aa22.98■■□□□ 1.27
U2AF1-201ENST00000291552 TBK1Q9UHD2 729 aa22.98■■□□□ 1.27
U2AF1-201ENST00000291552 GNG14A0A1W2PPG7 69 aa22.97■■□□□ 1.27
U2AF1-201ENST00000291552 MBD3L4A6NDZ8 208 aaPredicted RBP22.97■■□□□ 1.27
U2AF1-201ENST00000291552 MBD3L3A6NE82 208 aaPredicted RBP22.97■■□□□ 1.27
U2AF1-201ENST00000291552 MBD3L5A6NJ08 208 aaPredicted RBP22.97■■□□□ 1.27
U2AF1-201ENST00000291552 DVL2O14641 736 aa22.97■■□□□ 1.27
U2AF1-201ENST00000291552 CTAG2O75638 210 aa22.97■■□□□ 1.27
U2AF1-201ENST00000291552 DNAJA1P31689 397 aaKnown RBP22.97■■□□□ 1.27
U2AF1-201ENST00000291552 UQCRC1P31930 480 aa22.97■■□□□ 1.27
U2AF1-201ENST00000291552 SH2D5Q6ZV89 423 aa22.97■■□□□ 1.27
U2AF1-201ENST00000291552 CEP112Q8N8E3 955 aa22.97■■□□□ 1.27
U2AF1-201ENST00000291552 LRRN4CLQ8ND94 238 aa22.97■■□□□ 1.27
U2AF1-201ENST00000291552 OR7G2Q8NG99 324 aa22.97■■□□□ 1.27
U2AF1-201ENST00000291552 MBD3L2Q8NHZ7 208 aaPredicted RBP22.97■■□□□ 1.27
U2AF1-201ENST00000291552 RNF138Q8WVD3 245 aa22.97■■□□□ 1.27
U2AF1-201ENST00000291552 ERP27Q96DN0 273 aa22.97■■□□□ 1.27
U2AF1-201ENST00000291552 SLC35A4Q96G79 324 aa22.97■■□□□ 1.27
U2AF1-201ENST00000291552 TRIB1Q96RU8 372 aa22.97■■□□□ 1.27
U2AF1-201ENST00000291552 RHOXF2Q9BQY4 288 aa22.97■■□□□ 1.27
U2AF1-201ENST00000291552 EXO1Q9UQ84 846 aaKnown RBP22.97■■□□□ 1.27
U2AF1-201ENST00000291552 STK38LQ9Y2H1 464 aa22.97■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms