RNA–Protein interactions for RNA: ENST00000290650.8

UBR1-201, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBR1, Length 7,761 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-201ENST00000290650 PARM1Q6UWI2 310 aa4.53□□□□□ -1.68
UBR1-201ENST00000290650 CD300LGQ6UXG3 332 aa4.53□□□□□ -1.68
UBR1-201ENST00000290650 ZNF517Q6ZMY9 492 aaPredicted RBP4.53□□□□□ -1.68
UBR1-201ENST00000290650 KRT77Q7Z794 578 aa4.53□□□□□ -1.68
UBR1-201ENST00000290650 LRRC25Q8N386 305 aaPredicted RBP4.53□□□□□ -1.68
UBR1-201ENST00000290650 NLGN4YQ8NFZ3 816 aaPredicted RBP4.53□□□□□ -1.68
UBR1-201ENST00000290650 OR10H5Q8NGA6 315 aa4.53□□□□□ -1.68
UBR1-201ENST00000290650 MAPKAP1Q9BPZ7 522 aa4.53□□□□□ -1.68
UBR1-201ENST00000290650 APOOQ9BUR5 198 aa4.53□□□□□ -1.68
UBR1-201ENST00000290650 VN1R3Q9BXE9 311 aa4.53□□□□□ -1.68
UBR1-201ENST00000290650 ZBP1Q9H171 429 aa4.53□□□□□ -1.68
UBR1-201ENST00000290650 TCF7L1Q9HCS4 588 aa4.53□□□□□ -1.68
UBR1-201ENST00000290650 MKKSQ9NPJ1 570 aaPredicted RBP4.53□□□□□ -1.68
UBR1-201ENST00000290650 DUX4Q9UBX2 424 aa4.53□□□□□ -1.68
UBR1-201ENST00000290650 CMAHPQ9Y471 501 aa4.53□□□□□ -1.68
UBR1-201ENST00000290650 TRIOBPQ9H2D6 2365 aa4.53□□□□□ -1.68
UBR1-201ENST00000290650 SOX1O00570 391 aaPredicted RBP4.52□□□□□ -1.69
UBR1-201ENST00000290650 LINC01565O15544 149 aa4.52□□□□□ -1.69
UBR1-201ENST00000290650 EEF1E1O43324 174 aaKnown RBP4.52□□□□□ -1.69
UBR1-201ENST00000290650 RNF13O43567 381 aa4.52□□□□□ -1.69
UBR1-201ENST00000290650 AP1G1O43747 822 aa4.52□□□□□ -1.69
UBR1-201ENST00000290650 GPR37L1O60883 481 aa4.52□□□□□ -1.69
UBR1-201ENST00000290650 THEGLP0DJG4 465 aa4.52□□□□□ -1.69
UBR1-201ENST00000290650 PYCR1P32322 319 aa4.52□□□□□ -1.69
UBR1-201ENST00000290650 RELAQ04206 551 aa4.52□□□□□ -1.69
UBR1-201ENST00000290650 KCNC3Q14003 757 aa4.52□□□□□ -1.69
UBR1-201ENST00000290650 SPHARQ15513 63 aa4.52□□□□□ -1.69
UBR1-201ENST00000290650 C10orf62Q5T681 223 aaPredicted RBP4.52□□□□□ -1.69
UBR1-201ENST00000290650 SLC27A4Q6P1M0 643 aa4.52□□□□□ -1.69
UBR1-201ENST00000290650 DLEU7Q6UYE1 221 aa4.52□□□□□ -1.69
UBR1-201ENST00000290650 ZNF765Q7L2R6 523 aa4.52□□□□□ -1.69
UBR1-201ENST00000290650 DNAJB8Q8NHS0 232 aa4.52□□□□□ -1.69
UBR1-201ENST00000290650 EID2BQ96D98 161 aa4.52□□□□□ -1.69
UBR1-201ENST00000290650 TRMT2BQ96GJ1 504 aaKnown RBP4.52□□□□□ -1.69
UBR1-201ENST00000290650 WDR92Q96MX6 357 aa4.52□□□□□ -1.69
UBR1-201ENST00000290650 MICU1Q9BPX6 476 aa4.52□□□□□ -1.69
UBR1-201ENST00000290650 NDC1Q9BTX1 674 aa4.52□□□□□ -1.69
UBR1-201ENST00000290650 PBX4Q9BYU1 374 aa4.52□□□□□ -1.69
UBR1-201ENST00000290650 KLRF1Q9NZS2 232 aa4.52□□□□□ -1.69
UBR1-201ENST00000290650 EIF3KQ9UBQ5 218 aaKnown RBP4.52□□□□□ -1.69
UBR1-201ENST00000290650 MBD1Q9UIS9 605 aaPredicted RBP4.52□□□□□ -1.69
UBR1-201ENST00000290650 CD207Q9UJ71 328 aa4.52□□□□□ -1.69
UBR1-201ENST00000290650 ZNF225Q9UK10 706 aa4.52□□□□□ -1.69
UBR1-201ENST00000290650 ZC3H12DA2A288 527 aaKnown RBP4.52□□□□□ -1.69
UBR1-201ENST00000290650 ANTXRLA6NF34 631 aa4.52□□□□□ -1.69
UBR1-201ENST00000290650 PLATP00750 562 aa4.52□□□□□ -1.69
UBR1-201ENST00000290650 CSTAP01040 98 aa4.52□□□□□ -1.69
UBR1-201ENST00000290650 CCNOP22674 350 aa4.52□□□□□ -1.69
UBR1-201ENST00000290650 CRHBPP24387 322 aa4.52□□□□□ -1.69
UBR1-201ENST00000290650 ITGB7P26010 798 aa4.52□□□□□ -1.69
UBR1-201ENST00000290650 PSMB10P40306 273 aa4.52□□□□□ -1.69
UBR1-201ENST00000290650 MNDAP41218 407 aa4.52□□□□□ -1.69
UBR1-201ENST00000290650 DNASE1L1P49184 302 aa4.52□□□□□ -1.69
UBR1-201ENST00000290650 GPR19Q15760 415 aa4.52□□□□□ -1.69
UBR1-201ENST00000290650 TMEM53Q6P2H8 277 aa4.52□□□□□ -1.69
UBR1-201ENST00000290650 Q6ZNX1 250 aa4.52□□□□□ -1.69
UBR1-201ENST00000290650 FAM83HQ6ZRV2 1179 aaPredicted RBP4.52□□□□□ -1.69
UBR1-201ENST00000290650 DPPA4Q7L190 304 aa4.52□□□□□ -1.69
UBR1-201ENST00000290650 OR56A1Q8NGH5 318 aa4.52□□□□□ -1.69
UBR1-201ENST00000290650 OR6N2Q8NGY6 317 aa4.52□□□□□ -1.69
UBR1-201ENST00000290650 SETD6Q8TBK2 473 aa4.52□□□□□ -1.69
UBR1-201ENST00000290650 NEK7Q8TDX7 302 aa4.52□□□□□ -1.69
UBR1-201ENST00000290650 RIT1Q92963 219 aa4.52□□□□□ -1.69
UBR1-201ENST00000290650 SLC22A18Q96BI1 424 aa4.52□□□□□ -1.69
UBR1-201ENST00000290650 ZMYND19Q96E35 227 aaPredicted RBP4.52□□□□□ -1.69
UBR1-201ENST00000290650 WSB2Q9NYS7 404 aaPredicted RBP4.52□□□□□ -1.69
UBR1-201ENST00000290650 CALML5Q9NZT1 146 aa4.52□□□□□ -1.69
UBR1-201ENST00000290650 NFKBIL1Q9UBC1 381 aaPredicted RBP4.52□□□□□ -1.69
UBR1-201ENST00000290650 SLC23A2Q9UGH3 650 aa4.52□□□□□ -1.69
UBR1-201ENST00000290650 CD300AQ9UGN4 299 aa4.52□□□□□ -1.69
UBR1-201ENST00000290650 CNOT11Q9UKZ1 510 aaKnown RBP4.52□□□□□ -1.69
UBR1-201ENST00000290650 DUXAA6NLW8 204 aa4.52□□□□□ -1.69
UBR1-201ENST00000290650 CLDN24A6NM45 220 aa4.52□□□□□ -1.69
UBR1-201ENST00000290650 GPR89AB7ZAQ6 455 aa4.52□□□□□ -1.69
UBR1-201ENST00000290650 KCNK5O95279 499 aa4.52□□□□□ -1.69
UBR1-201ENST00000290650 GPR89BP0CG08 455 aa4.52□□□□□ -1.69
UBR1-201ENST00000290650 MYF5P13349 255 aa4.52□□□□□ -1.69
UBR1-201ENST00000290650 PRLHRP49683 370 aa4.52□□□□□ -1.69
UBR1-201ENST00000290650 CLK3P49761 638 aaKnown RBP4.52□□□□□ -1.69
UBR1-201ENST00000290650 RAB28P51157 221 aa4.52□□□□□ -1.69
UBR1-201ENST00000290650 GMFBP60983 142 aa4.52□□□□□ -1.69
UBR1-201ENST00000290650 POU6F2P78424 691 aaPredicted RBP4.52□□□□□ -1.69
UBR1-201ENST00000290650 TUBA3CQ13748 450 aa4.52□□□□□ -1.69
UBR1-201ENST00000290650 TRAM2Q15035 370 aa4.52□□□□□ -1.69
UBR1-201ENST00000290650 DUSP7Q16829 419 aa4.52□□□□□ -1.69
UBR1-201ENST00000290650 EIPR1Q53HC9 387 aa4.52□□□□□ -1.69
UBR1-201ENST00000290650 BORAQ6PGQ7 559 aa4.52□□□□□ -1.69
UBR1-201ENST00000290650 SLC36A4Q6YBV0 504 aa4.52□□□□□ -1.69
UBR1-201ENST00000290650 TMED4Q7Z7H5 227 aa4.52□□□□□ -1.69
UBR1-201ENST00000290650 GPR149Q86SP6 731 aa4.52□□□□□ -1.69
UBR1-201ENST00000290650 SLC7A5P1Q8MH63 180 aa4.52□□□□□ -1.69
UBR1-201ENST00000290650 SDR9C7Q8NEX9 313 aa4.52□□□□□ -1.69
UBR1-201ENST00000290650 CXorf36Q9H7Y0 433 aa4.52□□□□□ -1.69
UBR1-201ENST00000290650 PRTFDC1Q9NRG1 225 aa4.52□□□□□ -1.69
UBR1-201ENST00000290650 ERVK-11Q9UQG0 969 aa4.52□□□□□ -1.69
UBR1-201ENST00000290650 C2orf72A6NCS6 295 aa4.52□□□□□ -1.69
UBR1-201ENST00000290650 MAS1P04201 325 aa4.52□□□□□ -1.69
UBR1-201ENST00000290650 PEPDP12955 493 aa4.52□□□□□ -1.69
UBR1-201ENST00000290650 GSTM2P28161 218 aa4.52□□□□□ -1.69
UBR1-201ENST00000290650 OC90Q02509 493 aaPredicted RBP4.52□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms