RNA–Protein interactions for RNA: ENST00000287008.7

PCDH1-201, Transcript of protocadherin 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene PCDH1, Length 4,793 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1-201ENST00000287008 OR9A2Q8NGT5 310 aa17.56■□□□□ 0.4
PCDH1-201ENST00000287008 EIF3KQ9UBQ5 218 aaKnown RBP17.56■□□□□ 0.4
PCDH1-201ENST00000287008 NAALAD2Q9Y3Q0 740 aa17.56■□□□□ 0.4
PCDH1-201ENST00000287008 SLC35F4A4IF30 521 aa17.56■□□□□ 0.4
PCDH1-201ENST00000287008 OR14I1A6ND48 311 aa17.56■□□□□ 0.4
PCDH1-201ENST00000287008 SNAP29O95721 258 aa17.56■□□□□ 0.4
PCDH1-201ENST00000287008 PRH1P02810 166 aa17.56■□□□□ 0.4
PCDH1-201ENST00000287008 HSD11B2P80365 405 aa17.56■□□□□ 0.4
PCDH1-201ENST00000287008 RPE65Q16518 533 aa17.56■□□□□ 0.4
PCDH1-201ENST00000287008 ZER1Q7Z7L7 766 aa17.56■□□□□ 0.4
PCDH1-201ENST00000287008 HDAC2Q92769 488 aaKnown RBP17.56■□□□□ 0.4
PCDH1-201ENST00000287008 MAL2Q969L2 176 aa17.56■□□□□ 0.4
PCDH1-201ENST00000287008 ARRDC3Q96B67 414 aa17.56■□□□□ 0.4
PCDH1-201ENST00000287008 MSLNLQ96KJ4 702 aa17.56■□□□□ 0.4
PCDH1-201ENST00000287008 UHRF1Q96T88 793 aaPredicted RBP17.56■□□□□ 0.4
PCDH1-201ENST00000287008 RGPD1P0DJD0 1748 aa17.56■□□□□ 0.4
PCDH1-201ENST00000287008 C1SP09871 688 aa17.55■□□□□ 0.4
PCDH1-201ENST00000287008 SFTPDP35247 375 aa17.55■□□□□ 0.4
PCDH1-201ENST00000287008 ZMYND11Q15326 602 aa17.55■□□□□ 0.4
PCDH1-201ENST00000287008 TLDC1Q6P9B6 456 aa17.55■□□□□ 0.4
PCDH1-201ENST00000287008 GALNT15Q8N3T1 639 aa17.55■□□□□ 0.4
PCDH1-201ENST00000287008 SLC22A4Q9H015 551 aa17.55■□□□□ 0.4
PCDH1-201ENST00000287008 TRNAU1APQ9NX07 287 aaKnown RBP17.55■□□□□ 0.4
PCDH1-201ENST00000287008 THAP10Q9P2Z0 257 aaPredicted RBP17.55■□□□□ 0.4
PCDH1-201ENST00000287008 BAIAP2Q9UQB8 552 aa17.55■□□□□ 0.4
PCDH1-201ENST00000287008 PRSS21Q9Y6M0 314 aa17.55■□□□□ 0.4
PCDH1-201ENST00000287008 OR2T1O43869 369 aa17.55■□□□□ 0.4
PCDH1-201ENST00000287008 RIDAP52758 137 aaKnown RBP17.55■□□□□ 0.4
PCDH1-201ENST00000287008 CTXN1P60606 82 aa17.55■□□□□ 0.4
PCDH1-201ENST00000287008 NPRL3Q12980 569 aa17.55■□□□□ 0.4
PCDH1-201ENST00000287008 TRNP1Q6NT89 227 aa17.55■□□□□ 0.4
PCDH1-201ENST00000287008 VTCN1Q7Z7D3 282 aa17.55■□□□□ 0.4
PCDH1-201ENST00000287008 LHFPL3Q86UP9 236 aa17.55■□□□□ 0.4
PCDH1-201ENST00000287008 DENND6BQ8NEG7 585 aa17.55■□□□□ 0.4
PCDH1-201ENST00000287008 TESCQ96BS2 214 aa17.55■□□□□ 0.4
PCDH1-201ENST00000287008 FEVQ99581 238 aa17.55■□□□□ 0.4
PCDH1-201ENST00000287008 MAGIXQ9H6Y5 334 aa17.55■□□□□ 0.4
PCDH1-201ENST00000287008 SMURF1Q9HCE7 757 aa17.55■□□□□ 0.4
PCDH1-201ENST00000287008 SACM1LQ9NTJ5 587 aa17.55■□□□□ 0.4
PCDH1-201ENST00000287008 CXXC1Q9P0U4 656 aaPredicted RBP17.55■□□□□ 0.4
PCDH1-201ENST00000287008 ITGB1BP2Q9UKP3 347 aa17.55■□□□□ 0.4
PCDH1-201ENST00000287008 CCRL2O00421 344 aa17.55■□□□□ 0.4
PCDH1-201ENST00000287008 XPNPEP2O43895 674 aa17.55■□□□□ 0.4
PCDH1-201ENST00000287008 ADAP00813 363 aa17.55■□□□□ 0.4
PCDH1-201ENST00000287008 HSD17B1P14061 328 aa17.55■□□□□ 0.4
PCDH1-201ENST00000287008 SDC1P18827 310 aa17.55■□□□□ 0.4
PCDH1-201ENST00000287008 HIST1H1TP22492 207 aaPredicted RBP17.55■□□□□ 0.4
PCDH1-201ENST00000287008 SLC6A8P48029 635 aa17.55■□□□□ 0.4
PCDH1-201ENST00000287008 POU4F2Q12837 409 aa17.55■□□□□ 0.4
PCDH1-201ENST00000287008 ADAM15Q13444 863 aa17.55■□□□□ 0.4
PCDH1-201ENST00000287008 TRIM61Q5EBN2 209 aa17.55■□□□□ 0.4
PCDH1-201ENST00000287008 NAGSQ8N159 534 aa17.55■□□□□ 0.4
PCDH1-201ENST00000287008 OR5T2Q8NGG2 359 aa17.55■□□□□ 0.4
PCDH1-201ENST00000287008 LRR1Q96L50 414 aa17.55■□□□□ 0.4
PCDH1-201ENST00000287008 MACROD1Q9BQ69 325 aa17.55■□□□□ 0.4
PCDH1-201ENST00000287008 RXFP3Q9NSD7 469 aa17.55■□□□□ 0.4
PCDH1-201ENST00000287008 BTNL2Q9UIR0 455 aa17.55■□□□□ 0.4
PCDH1-201ENST00000287008 ATXN7L1Q9ULK2 861 aaPredicted RBP17.55■□□□□ 0.4
PCDH1-201ENST00000287008 HMGN2P05204 90 aaKnown RBP17.55■□□□□ 0.4
PCDH1-201ENST00000287008 GRK5P34947 590 aa17.55■□□□□ 0.4
PCDH1-201ENST00000287008 RBM34P42696 430 aaKnown RBP17.55■□□□□ 0.4
PCDH1-201ENST00000287008 TLE3Q04726 772 aa17.55■□□□□ 0.4
PCDH1-201ENST00000287008 RGNQ15493 299 aa17.55■□□□□ 0.4
PCDH1-201ENST00000287008 GTDC1Q4AE62 458 aa17.55■□□□□ 0.4
PCDH1-201ENST00000287008 TUBA3EQ6PEY2 450 aa17.55■□□□□ 0.4
PCDH1-201ENST00000287008 CXCL16Q9H2A7 254 aa17.55■□□□□ 0.4
PCDH1-201ENST00000287008 TBX21Q9UL17 535 aa17.55■□□□□ 0.4
PCDH1-201ENST00000287008 MYH3P11055 1940 aa17.54■□□□□ 0.4
PCDH1-201ENST00000287008 CPNE6O95741 557 aa17.54■□□□□ 0.4
PCDH1-201ENST00000287008 ATXN1LP0C7T5 689 aaKnown RBP17.54■□□□□ 0.4
PCDH1-201ENST00000287008 EFR3AQ14156 821 aa17.54■□□□□ 0.4
PCDH1-201ENST00000287008 PLCZ1Q86YW0 608 aa17.54■□□□□ 0.4
PCDH1-201ENST00000287008 UEVLDQ8IX04 471 aa17.54■□□□□ 0.4
PCDH1-201ENST00000287008 NRMQ8IXM6 262 aa17.54■□□□□ 0.4
PCDH1-201ENST00000287008 PHF7Q9BWX1 381 aaPredicted RBP17.54■□□□□ 0.4
PCDH1-201ENST00000287008 TMEM168Q9H0V1 697 aa17.54■□□□□ 0.4
PCDH1-201ENST00000287008 METTL8Q9H825 291 aaKnown RBP17.54■□□□□ 0.4
PCDH1-201ENST00000287008 NSG1A0A0A6YYJ2 146 aa17.54■□□□□ 0.4
PCDH1-201ENST00000287008 HPRP00739 348 aa17.54■□□□□ 0.4
PCDH1-201ENST00000287008 HSD17B12Q53GQ0 312 aa17.54■□□□□ 0.4
PCDH1-201ENST00000287008 PRAMEF8Q5VWM4 474 aa17.54■□□□□ 0.4
PCDH1-201ENST00000287008 PRAMEF7Q5VXH5 474 aa17.54■□□□□ 0.4
PCDH1-201ENST00000287008 TMEM184AQ6ZMB5 413 aa17.54■□□□□ 0.4
PCDH1-201ENST00000287008 METTL25Q8N6Q8 603 aa17.54■□□□□ 0.4
PCDH1-201ENST00000287008 OR52E2Q8NGJ4 325 aa17.54■□□□□ 0.4
PCDH1-201ENST00000287008 INSM2Q96T92 566 aaPredicted RBP17.54■□□□□ 0.4
PCDH1-201ENST00000287008 TRPV4Q9HBA0 871 aa17.54■□□□□ 0.4
PCDH1-201ENST00000287008 ERCC1P07992 297 aaPredicted RBP17.54■□□□□ 0.4
PCDH1-201ENST00000287008 ANKDD1AQ495B1 522 aa17.54■□□□□ 0.4
PCDH1-201ENST00000287008 SFT2D3Q587I9 215 aa17.54■□□□□ 0.4
PCDH1-201ENST00000287008 TBC1D20Q96BZ9 403 aa17.54■□□□□ 0.4
PCDH1-201ENST00000287008 CHIAQ9BZP6 476 aa17.54■□□□□ 0.4
PCDH1-201ENST00000287008 VNN3Q9NY84 501 aa17.54■□□□□ 0.4
PCDH1-201ENST00000287008 DHDHQ9UQ10 334 aa17.54■□□□□ 0.4
PCDH1-201ENST00000287008 TPRP12270 2363 aaKnown RBP17.54■□□□□ 0.4
PCDH1-201ENST00000287008 BTAF1O14981 1849 aa17.54■□□□□ 0.4
PCDH1-201ENST00000287008 MROH6A6NGR9 719 aa17.53■□□□□ 0.4
PCDH1-201ENST00000287008 H3BML4 177 aa17.53■□□□□ 0.4
PCDH1-201ENST00000287008 WSCD2Q2TBF2 565 aa17.53■□□□□ 0.4
PCDH1-201ENST00000287008 ZNF613Q6PF04 617 aa17.53■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms