RNA–Protein interactions for RNA: ENST00000284767.9

PDLIM3-201, Transcript of PDZ and LIM domain 3, humanhuman

TSL 5 BASIC

Gene PDLIM3, Length 2,589 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-201ENST00000284767 PRDX1Q06830 199 aaKnown RBP17.25■□□□□ 0.35
PDLIM3-201ENST00000284767 SLAMF1Q13291 335 aa17.25■□□□□ 0.35
PDLIM3-201ENST00000284767 LARS2Q15031 903 aaKnown RBP17.25■□□□□ 0.35
PDLIM3-201ENST00000284767 GLYR1Q49A26 553 aaPredicted RBP17.25■□□□□ 0.35
PDLIM3-201ENST00000284767 CYP27C1Q4G0S4 372 aa17.25■□□□□ 0.35
PDLIM3-201ENST00000284767 XKRXQ6PP77 449 aa17.25■□□□□ 0.35
PDLIM3-201ENST00000284767 USP30Q70CQ3 517 aa17.25■□□□□ 0.35
PDLIM3-201ENST00000284767 NOXA1Q86UR1 476 aa17.25■□□□□ 0.35
PDLIM3-201ENST00000284767 SLC34A3Q8N130 599 aa17.25■□□□□ 0.35
PDLIM3-201ENST00000284767 TMEM145Q8NBT3 493 aa17.25■□□□□ 0.35
PDLIM3-201ENST00000284767 FAM3CQ92520 227 aa17.25■□□□□ 0.35
PDLIM3-201ENST00000284767 RHBGQ9H310 441 aa17.25■□□□□ 0.35
PDLIM3-201ENST00000284767 C8orf33Q9H7E9 229 aaPredicted RBP17.25■□□□□ 0.35
PDLIM3-201ENST00000284767 MYNNQ9NPC7 610 aa17.25■□□□□ 0.35
PDLIM3-201ENST00000284767 TNFRSF10AO00220 468 aa17.25■□□□□ 0.35
PDLIM3-201ENST00000284767 SEC14L5O43304 696 aa17.25■□□□□ 0.35
PDLIM3-201ENST00000284767 GPR37L1O60883 481 aa17.25■□□□□ 0.35
PDLIM3-201ENST00000284767 LGI1O95970 557 aa17.25■□□□□ 0.35
PDLIM3-201ENST00000284767 OSMP13725 252 aa17.25■□□□□ 0.35
PDLIM3-201ENST00000284767 AZGP1P25311 298 aaKnown RBP17.25■□□□□ 0.35
PDLIM3-201ENST00000284767 BSGP35613 385 aa17.25■□□□□ 0.35
PDLIM3-201ENST00000284767 HSD17B2P37059 387 aa17.25■□□□□ 0.35
PDLIM3-201ENST00000284767 MLLT11Q13015 90 aaPredicted RBP17.25■□□□□ 0.35
PDLIM3-201ENST00000284767 RDH10Q8IZV5 341 aa17.25■□□□□ 0.35
PDLIM3-201ENST00000284767 SCARF2Q96GP6 870 aaPredicted RBP17.25■□□□□ 0.35
PDLIM3-201ENST00000284767 TTYH2Q9BSA4 534 aa17.25■□□□□ 0.35
PDLIM3-201ENST00000284767 SLC6A20Q9NP91 592 aa17.25■□□□□ 0.35
PDLIM3-201ENST00000284767 TAAR2Q9P1P5 351 aa17.25■□□□□ 0.35
PDLIM3-201ENST00000284767 SCML1Q9UN30 329 aa17.25■□□□□ 0.35
PDLIM3-201ENST00000284767 RPL36Q9Y3U8 105 aaKnown RBP17.25■□□□□ 0.35
PDLIM3-201ENST00000284767 LAMA1P25391 3075 aa17.24■□□□□ 0.35
PDLIM3-201ENST00000284767 WASHC1A8K0Z3 465 aa17.24■□□□□ 0.35
PDLIM3-201ENST00000284767 CKMT1AP12532 417 aa17.24■□□□□ 0.35
PDLIM3-201ENST00000284767 CHI3L1P36222 383 aaPredicted RBP17.24■□□□□ 0.35
PDLIM3-201ENST00000284767 ILKQ13418 452 aa17.24■□□□□ 0.35
PDLIM3-201ENST00000284767 PDE7AQ13946 482 aa17.24■□□□□ 0.35
PDLIM3-201ENST00000284767 GPAT3Q53EU6 434 aa17.24■□□□□ 0.35
PDLIM3-201ENST00000284767 WASH2PQ6VEQ5 465 aa17.24■□□□□ 0.35
PDLIM3-201ENST00000284767 SFTPA2Q8IWL1 248 aa17.24■□□□□ 0.35
PDLIM3-201ENST00000284767 PHF6Q8IWS0 365 aaKnown RBP eCLIP17.24■□□□□ 0.35
PDLIM3-201ENST00000284767 VWA5B2Q8N398 1253 aa17.24■□□□□ 0.35
PDLIM3-201ENST00000284767 NANOGP1Q8N7R0 232 aa17.24■□□□□ 0.35
PDLIM3-201ENST00000284767 GDPD1Q8N9F7 314 aa17.24■□□□□ 0.35
PDLIM3-201ENST00000284767 PROKR2Q8NFJ6 384 aa17.24■□□□□ 0.35
PDLIM3-201ENST00000284767 OR4E2Q8NGC2 313 aa17.24■□□□□ 0.35
PDLIM3-201ENST00000284767 SLC25A46Q96AG3 418 aa17.24■□□□□ 0.35
PDLIM3-201ENST00000284767 IL4I1Q96RQ9 567 aa17.24■□□□□ 0.35
PDLIM3-201ENST00000284767 C11orf16Q9NQ32 467 aa17.24■□□□□ 0.35
PDLIM3-201ENST00000284767 TIGARQ9NQ88 270 aa17.24■□□□□ 0.35
PDLIM3-201ENST00000284767 SPEGQ15772 3267 aa17.24■□□□□ 0.35
PDLIM3-201ENST00000284767 NOTOA8MTQ0 251 aa17.24■□□□□ 0.35
PDLIM3-201ENST00000284767 NDUFB5O43674 189 aa17.24■□□□□ 0.35
PDLIM3-201ENST00000284767 TMPRSS11DO60235 418 aa17.24■□□□□ 0.35
PDLIM3-201ENST00000284767 TPST2O60704 377 aa17.24■□□□□ 0.35
PDLIM3-201ENST00000284767 RASGRP1O95267 797 aa17.24■□□□□ 0.35
PDLIM3-201ENST00000284767 IL1AP01583 271 aa17.24■□□□□ 0.35
PDLIM3-201ENST00000284767 ALPPP05187 535 aa17.24■□□□□ 0.35
PDLIM3-201ENST00000284767 PRKCAP17252 672 aa17.24■□□□□ 0.35
PDLIM3-201ENST00000284767 MLLT3P42568 568 aaPredicted RBP17.24■□□□□ 0.35
PDLIM3-201ENST00000284767 C1DQ13901 141 aaKnown RBP17.24■□□□□ 0.35
PDLIM3-201ENST00000284767 NFATC4Q14934 902 aa17.24■□□□□ 0.35
PDLIM3-201ENST00000284767 FAM131AQ6UXB0 335 aa17.24■□□□□ 0.35
PDLIM3-201ENST00000284767 UBE3DQ7Z6J8 389 aa17.24■□□□□ 0.35
PDLIM3-201ENST00000284767 UCK2Q9BZX2 261 aa17.24■□□□□ 0.35
PDLIM3-201ENST00000284767 PCBD2Q9H0N5 130 aa17.24■□□□□ 0.35
PDLIM3-201ENST00000284767 KLHL31Q9H511 634 aa17.24■□□□□ 0.35
PDLIM3-201ENST00000284767 C6orf106Q9H6K1 298 aaPredicted RBP17.24■□□□□ 0.35
PDLIM3-201ENST00000284767 MIEF1Q9NQG6 463 aa17.24■□□□□ 0.35
PDLIM3-201ENST00000284767 CLEC2DQ9UHP7 191 aa17.24■□□□□ 0.35
PDLIM3-201ENST00000284767 MAP4K5Q9Y4K4 846 aa17.24■□□□□ 0.35
PDLIM3-201ENST00000284767 SNX11Q9Y5W9 270 aa17.24■□□□□ 0.35
PDLIM3-201ENST00000284767 ARHGEF17Q96PE2 2063 aaPredicted RBP17.24■□□□□ 0.35
PDLIM3-201ENST00000284767 TFECO14948 347 aaPredicted RBP17.23■□□□□ 0.35
PDLIM3-201ENST00000284767 BCL6P41182 706 aa17.23■□□□□ 0.35
PDLIM3-201ENST00000284767 ACTR1BP42025 376 aa17.23■□□□□ 0.35
PDLIM3-201ENST00000284767 MAPK12P53778 367 aa17.23■□□□□ 0.35
PDLIM3-201ENST00000284767 ACTR1AP61163 376 aa17.23■□□□□ 0.35
PDLIM3-201ENST00000284767 SLC5A12Q1EHB4 618 aa17.23■□□□□ 0.35
PDLIM3-201ENST00000284767 YIF1BQ5BJH7 314 aa17.23■□□□□ 0.35
PDLIM3-201ENST00000284767 RAB42Q8N4Z0 105 aa17.23■□□□□ 0.35
PDLIM3-201ENST00000284767 CLDN22Q8N7P3 220 aa17.23■□□□□ 0.35
PDLIM3-201ENST00000284767 OR2L8Q8NGY9 312 aa17.23■□□□□ 0.35
PDLIM3-201ENST00000284767 TRMT61AQ96FX7 289 aaKnown RBP17.23■□□□□ 0.35
PDLIM3-201ENST00000284767 POLR2J2Q9GZM3 115 aaKnown RBP17.23■□□□□ 0.35
PDLIM3-201ENST00000284767 MMP28Q9H239 520 aa17.23■□□□□ 0.35
PDLIM3-201ENST00000284767 SLAMF7Q9NQ25 335 aa17.23■□□□□ 0.35
PDLIM3-201ENST00000284767 REV1Q9UBZ9 1251 aa17.23■□□□□ 0.35
PDLIM3-201ENST00000284767 RAB23Q9ULC3 237 aa17.23■□□□□ 0.35
PDLIM3-201ENST00000284767 MMP17Q9ULZ9 603 aa17.23■□□□□ 0.35
PDLIM3-201ENST00000284767 C4orf51C9J302 202 aa17.23■□□□□ 0.35
PDLIM3-201ENST00000284767 RECKO95980 971 aa17.23■□□□□ 0.35
PDLIM3-201ENST00000284767 HNRNPA2B1P22626 353 aaKnown RBP17.23■□□□□ 0.35
PDLIM3-201ENST00000284767 GNG2P59768 71 aa17.23■□□□□ 0.35
PDLIM3-201ENST00000284767 TAB1Q15750 504 aa17.23■□□□□ 0.35
PDLIM3-201ENST00000284767 ZNF542PQ5EBM4 170 aa17.23■□□□□ 0.35
PDLIM3-201ENST00000284767 EOGTQ5NDL2 527 aa17.23■□□□□ 0.35
PDLIM3-201ENST00000284767 C12orf73Q69YU5 71 aa17.23■□□□□ 0.35
PDLIM3-201ENST00000284767 KIAA1143Q96AT1 154 aaPredicted RBP17.23■□□□□ 0.35
PDLIM3-201ENST00000284767 TM4SF18Q96CE8 201 aa17.23■□□□□ 0.35
PDLIM3-201ENST00000284767 FCRL4Q96PJ5 515 aa17.23■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 63.6 ms