RNA–Protein interactions for RNA: ENST00000273317.4

LIMD1-201, Transcript of LIM domains containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIMD1, Length 11,331 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD1-201ENST00000273317 PLEKHA3Q9HB20 300 aa7.61□□□□□ -1.19
LIMD1-201ENST00000273317 ANKRD33BA6NCL7 494 aa7.6□□□□□ -1.19
LIMD1-201ENST00000273317 UBBP0CG47 229 aa7.6□□□□□ -1.19
LIMD1-201ENST00000273317 UBCP0CG48 685 aaKnown RBP7.6□□□□□ -1.19
LIMD1-201ENST00000273317 HAPLN1P10915 354 aaPredicted RBP7.6□□□□□ -1.19
LIMD1-201ENST00000273317 PNMTP11086 282 aa7.6□□□□□ -1.19
LIMD1-201ENST00000273317 RPS27AP62979 156 aaKnown RBP7.6□□□□□ -1.19
LIMD1-201ENST00000273317 UBA52P62987 128 aaKnown RBP7.6□□□□□ -1.19
LIMD1-201ENST00000273317 NFATC3Q12968 1075 aa7.6□□□□□ -1.19
LIMD1-201ENST00000273317 OR1J4Q8NGS1 313 aa7.6□□□□□ -1.19
LIMD1-201ENST00000273317 SPTSSAQ969W0 71 aa7.6□□□□□ -1.19
LIMD1-201ENST00000273317 SLC25A44Q96H78 314 aaPredicted RBP7.6□□□□□ -1.19
LIMD1-201ENST00000273317 COQ10AQ96MF6 247 aa7.6□□□□□ -1.19
LIMD1-201ENST00000273317 HDHD5Q9BXW7 423 aa7.6□□□□□ -1.19
LIMD1-201ENST00000273317 ZNF442Q9H7R0 627 aa7.6□□□□□ -1.19
LIMD1-201ENST00000273317 DOT1LQ8TEK3 1739 aa7.6□□□□□ -1.19
LIMD1-201ENST00000273317 A0A1W2PRU2 124 aa7.6□□□□□ -1.19
LIMD1-201ENST00000273317 TSTD3H0UI37 97 aa7.6□□□□□ -1.19
LIMD1-201ENST00000273317 GMDSO60547 372 aa7.6□□□□□ -1.19
LIMD1-201ENST00000273317 TFP02787 698 aa7.6□□□□□ -1.19
LIMD1-201ENST00000273317 PRKACGP22612 351 aa7.6□□□□□ -1.19
LIMD1-201ENST00000273317 MAGEA3P43357 314 aa7.6□□□□□ -1.19
LIMD1-201ENST00000273317 DUSP3P51452 185 aaPredicted RBP7.6□□□□□ -1.19
LIMD1-201ENST00000273317 MLLT10P55197 1068 aa7.6□□□□□ -1.19
LIMD1-201ENST00000273317 SLAMF1Q13291 335 aa7.6□□□□□ -1.19
LIMD1-201ENST00000273317 APOFQ13790 326 aa7.6□□□□□ -1.19
LIMD1-201ENST00000273317 GRM2Q14416 872 aa7.6□□□□□ -1.19
LIMD1-201ENST00000273317 ZNF704Q6ZNC4 412 aaPredicted RBP7.6□□□□□ -1.19
LIMD1-201ENST00000273317 SERINC5Q86VE9 423 aa7.6□□□□□ -1.19
LIMD1-201ENST00000273317 SLC35F2Q8IXU6 374 aa7.6□□□□□ -1.19
LIMD1-201ENST00000273317 VSTM2BA6NLU5 285 aa7.6□□□□□ -1.19
LIMD1-201ENST00000273317 SOCS2O14508 198 aa7.6□□□□□ -1.19
LIMD1-201ENST00000273317 DIRAS1O95057 198 aa7.6□□□□□ -1.19
LIMD1-201ENST00000273317 TGM6O95932 706 aa7.6□□□□□ -1.19
LIMD1-201ENST00000273317 AMY2AP04746 511 aa7.6□□□□□ -1.19
LIMD1-201ENST00000273317 UBL4AP11441 157 aa7.6□□□□□ -1.19
LIMD1-201ENST00000273317 CD6P30203 668 aa7.6□□□□□ -1.19
LIMD1-201ENST00000273317 CTHP32929 405 aa7.6□□□□□ -1.19
LIMD1-201ENST00000273317 NAA10P41227 235 aaPredicted RBP7.6□□□□□ -1.19
LIMD1-201ENST00000273317 PREPP48147 710 aa7.6□□□□□ -1.19
LIMD1-201ENST00000273317 BLOC1S1P78537 153 aa7.6□□□□□ -1.19
LIMD1-201ENST00000273317 IL17RCQ8NAC3 791 aa7.6□□□□□ -1.19
LIMD1-201ENST00000273317 OR9A4Q8NGU2 314 aa7.6□□□□□ -1.19
LIMD1-201ENST00000273317 ADAMTS16Q8TE57 1224 aa7.6□□□□□ -1.19
LIMD1-201ENST00000273317 HERPUD2Q9BSE4 406 aa7.6□□□□□ -1.19
LIMD1-201ENST00000273317 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP7.6□□□□□ -1.19
LIMD1-201ENST00000273317 TP63Q9H3D4 680 aaPredicted RBP7.6□□□□□ -1.19
LIMD1-201ENST00000273317 ZNF395Q9H8N7 513 aaPredicted RBP7.6□□□□□ -1.19
LIMD1-201ENST00000273317 NPAP1Q9NZP6 1156 aa7.6□□□□□ -1.19
LIMD1-201ENST00000273317 PCDHAC2Q9Y5I4 1007 aa7.6□□□□□ -1.19
LIMD1-201ENST00000273317 TIAM2Q8IVF5 1701 aa7.6□□□□□ -1.19
LIMD1-201ENST00000273317 MSR1P21757 451 aa7.6□□□□□ -1.19
LIMD1-201ENST00000273317 SNTB2Q13425 540 aaKnown RBP7.6□□□□□ -1.19
LIMD1-201ENST00000273317 PON2Q15165 354 aa7.6□□□□□ -1.19
LIMD1-201ENST00000273317 ANKRD54Q6NXT1 300 aa7.6□□□□□ -1.19
LIMD1-201ENST00000273317 DUX1O43812 170 aa7.6□□□□□ -1.19
LIMD1-201ENST00000273317 SNAPINO95295 136 aa7.6□□□□□ -1.19
LIMD1-201ENST00000273317 RAB5CP51148 216 aa7.6□□□□□ -1.19
LIMD1-201ENST00000273317 NXPE4Q6UWF7 544 aa7.6□□□□□ -1.19
LIMD1-201ENST00000273317 IGDCC3Q8IVU1 814 aa7.6□□□□□ -1.19
LIMD1-201ENST00000273317 PHF6Q8IWS0 365 aaKnown RBP eCLIP7.6□□□□□ -1.19
LIMD1-201ENST00000273317 PINK1Q9BXM7 581 aa7.6□□□□□ -1.19
LIMD1-201ENST00000273317 RLIMQ9NVW2 624 aa7.6□□□□□ -1.19
LIMD1-201ENST00000273317 POLR1CO15160 346 aaPredicted RBP7.6□□□□□ -1.19
LIMD1-201ENST00000273317 CASC3O15234 703 aaKnown RBP7.6□□□□□ -1.19
LIMD1-201ENST00000273317 BRINP1O60477 761 aa7.6□□□□□ -1.19
LIMD1-201ENST00000273317 AKAIN1P0CW23 69 aa7.6□□□□□ -1.19
LIMD1-201ENST00000273317 ALDH3B1P43353 468 aa7.6□□□□□ -1.19
LIMD1-201ENST00000273317 OR1E2P47887 323 aa7.6□□□□□ -1.19
LIMD1-201ENST00000273317 MICAQ29983 383 aa7.6□□□□□ -1.19
LIMD1-201ENST00000273317 SHFQ7M4L6 423 aa7.6□□□□□ -1.19
LIMD1-201ENST00000273317 ZNF100Q8IYN0 542 aa7.6□□□□□ -1.19
LIMD1-201ENST00000273317 LILRB2Q8N423 598 aa7.6□□□□□ -1.19
LIMD1-201ENST00000273317 CSNK1A1LQ8N752 337 aa7.6□□□□□ -1.19
LIMD1-201ENST00000273317 NANSQ9NR45 359 aa7.6□□□□□ -1.19
LIMD1-201ENST00000273317 KIF25Q9UIL4 384 aa7.6□□□□□ -1.19
LIMD1-201ENST00000273317 INSL5Q9Y5Q6 135 aa7.6□□□□□ -1.19
LIMD1-201ENST00000273317 CDHR4A6H8M9 788 aa7.6□□□□□ -1.19
LIMD1-201ENST00000273317 P2RX6O15547 441 aa7.6□□□□□ -1.19
LIMD1-201ENST00000273317 PRAMEF2O60811 474 aa7.6□□□□□ -1.19
LIMD1-201ENST00000273317 BEST1O76090 585 aa7.6□□□□□ -1.19
LIMD1-201ENST00000273317 TBX18O95935 607 aa7.6□□□□□ -1.19
LIMD1-201ENST00000273317 C2orf27AQ580R0 203 aa7.6□□□□□ -1.19
LIMD1-201ENST00000273317 OR5AK2Q8NH90 309 aa7.6□□□□□ -1.19
LIMD1-201ENST00000273317 MRGPRX2Q96LB1 330 aa7.6□□□□□ -1.19
LIMD1-201ENST00000273317 HEBP1Q9NRV9 189 aa7.6□□□□□ -1.19
LIMD1-201ENST00000273317 ASF1BQ9NVP2 202 aa7.6□□□□□ -1.19
LIMD1-201ENST00000273317 ADAMTS6Q9UKP5 1117 aa7.6□□□□□ -1.19
LIMD1-201ENST00000273317 PSAT1Q9Y617 370 aa7.6□□□□□ -1.19
LIMD1-201ENST00000273317 RPS17P08708 135 aaKnown RBP7.6□□□□□ -1.19
LIMD1-201ENST00000273317 TPT1P13693 172 aaKnown RBP7.6□□□□□ -1.19
LIMD1-201ENST00000273317 PPA1Q15181 289 aa7.6□□□□□ -1.19
LIMD1-201ENST00000273317 CLVS2Q5SYC1 327 aa7.6□□□□□ -1.19
LIMD1-201ENST00000273317 ATAD3CQ5T2N8 411 aa7.6□□□□□ -1.19
LIMD1-201ENST00000273317 KLBQ86Z14 1044 aa7.6□□□□□ -1.19
LIMD1-201ENST00000273317 OR5M3Q8NGP4 307 aa7.6□□□□□ -1.19
LIMD1-201ENST00000273317 RAB8BQ92930 207 aa7.6□□□□□ -1.19
LIMD1-201ENST00000273317 RRNAD1Q96FB5 475 aaKnown RBP7.6□□□□□ -1.19
LIMD1-201ENST00000273317 ACTRT3Q9BYD9 372 aa7.6□□□□□ -1.19
LIMD1-201ENST00000273317 SRA1Q9HD15 236 aaKnown RBP7.6□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms