RNA–Protein interactions for RNA: ENST00000269485.11

TNFRSF11A-201, Transcript of TNF receptor superfamily member 11a, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TNFRSF11A, Length 3,591 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF11A-201ENST00000269485 HTR3AP46098 478 aa13.35□□□□□ -0.27
TNFRSF11A-201ENST00000269485 ALDH3A2P51648 485 aa13.35□□□□□ -0.27
TNFRSF11A-201ENST00000269485 RHAGQ02094 409 aa13.35□□□□□ -0.27
TNFRSF11A-201ENST00000269485 SRSF11Q05519 484 aaKnown RBP13.35□□□□□ -0.27
TNFRSF11A-201ENST00000269485 ZNF181Q2M3W8 571 aa13.35□□□□□ -0.27
TNFRSF11A-201ENST00000269485 ZMAT1Q5H9K5 638 aa13.35□□□□□ -0.27
TNFRSF11A-201ENST00000269485 RBM48Q5RL73 367 aaKnown RBP13.35□□□□□ -0.27
TNFRSF11A-201ENST00000269485 PIP5KL1Q5T9C9 394 aa13.35□□□□□ -0.27
TNFRSF11A-201ENST00000269485 COL13A1Q5TAT6 717 aaPredicted RBP13.35□□□□□ -0.27
TNFRSF11A-201ENST00000269485 C6orf120Q7Z4R8 191 aa13.35□□□□□ -0.27
TNFRSF11A-201ENST00000269485 SLC51BQ86UW2 128 aa13.35□□□□□ -0.27
TNFRSF11A-201ENST00000269485 OR51L1Q8NGJ5 315 aa13.35□□□□□ -0.27
TNFRSF11A-201ENST00000269485 RIPOR3Q96MK2 946 aa13.35□□□□□ -0.27
TNFRSF11A-201ENST00000269485 TGM7Q96PF1 710 aa13.35□□□□□ -0.27
TNFRSF11A-201ENST00000269485 BCL7BQ9BQE9 202 aa13.35□□□□□ -0.27
TNFRSF11A-201ENST00000269485 EFCAB11Q9BUY7 163 aa13.35□□□□□ -0.27
TNFRSF11A-201ENST00000269485 CXorf36Q9H7Y0 433 aa13.35□□□□□ -0.27
TNFRSF11A-201ENST00000269485 SLC27A6Q9Y2P4 619 aa13.35□□□□□ -0.27
TNFRSF11A-201ENST00000269485 ATG4BQ9Y4P1 393 aa13.35□□□□□ -0.27
TNFRSF11A-201ENST00000269485 DMDP11532 3685 aa13.35□□□□□ -0.27
TNFRSF11A-201ENST00000269485 SLC5A10A0PJK1 596 aa13.35□□□□□ -0.27
TNFRSF11A-201ENST00000269485 GADD45GO95257 159 aa13.35□□□□□ -0.27
TNFRSF11A-201ENST00000269485 SOD1P00441 154 aa13.35□□□□□ -0.27
TNFRSF11A-201ENST00000269485 PDGFAP04085 211 aa13.35□□□□□ -0.27
TNFRSF11A-201ENST00000269485 UMPSP11172 480 aa13.35□□□□□ -0.27
TNFRSF11A-201ENST00000269485 NDUFV2P19404 249 aa13.35□□□□□ -0.27
TNFRSF11A-201ENST00000269485 GADD45AP24522 165 aa13.35□□□□□ -0.27
TNFRSF11A-201ENST00000269485 GNA13Q14344 377 aa13.35□□□□□ -0.27
TNFRSF11A-201ENST00000269485 CFAP77Q6ZQR2 320 aa13.35□□□□□ -0.27
TNFRSF11A-201ENST00000269485 SLC34A3Q8N130 599 aa13.35□□□□□ -0.27
TNFRSF11A-201ENST00000269485 TSTD1Q8NFU3 115 aa13.35□□□□□ -0.27
TNFRSF11A-201ENST00000269485 OR10G2Q8NGC3 310 aa13.35□□□□□ -0.27
TNFRSF11A-201ENST00000269485 SP7Q8TDD2 431 aaPredicted RBP13.35□□□□□ -0.27
TNFRSF11A-201ENST00000269485 GPR151Q8TDV0 419 aa13.35□□□□□ -0.27
TNFRSF11A-201ENST00000269485 ADAMTS15Q8TE58 950 aa13.35□□□□□ -0.27
TNFRSF11A-201ENST00000269485 VOPP1Q96AW1 172 aa13.35□□□□□ -0.27
TNFRSF11A-201ENST00000269485 FKBP10Q96AY3 582 aa13.35□□□□□ -0.27
TNFRSF11A-201ENST00000269485 ZG16BQ96DA0 208 aa13.35□□□□□ -0.27
TNFRSF11A-201ENST00000269485 TMEM19Q96HH6 336 aa13.35□□□□□ -0.27
TNFRSF11A-201ENST00000269485 YTHDF1Q9BYJ9 559 aaKnown RBP13.35□□□□□ -0.27
TNFRSF11A-201ENST00000269485 DNAJB9Q9UBS3 223 aa13.35□□□□□ -0.27
TNFRSF11A-201ENST00000269485 PCDHGB6Q9Y5F9 930 aa13.35□□□□□ -0.27
TNFRSF11A-201ENST00000269485 MEIOCA2RUB1 952 aa13.35□□□□□ -0.27
TNFRSF11A-201ENST00000269485 SGK494L7N484 410 aa13.35□□□□□ -0.27
TNFRSF11A-201ENST00000269485 SLCO2B1O94956 709 aa13.35□□□□□ -0.27
TNFRSF11A-201ENST00000269485 PLATP00750 562 aa13.35□□□□□ -0.27
TNFRSF11A-201ENST00000269485 RPN2P04844 631 aa13.35□□□□□ -0.27
TNFRSF11A-201ENST00000269485 RPS21P63220 83 aaKnown RBP13.35□□□□□ -0.27
TNFRSF11A-201ENST00000269485 SHC2P98077 582 aa13.35□□□□□ -0.27
TNFRSF11A-201ENST00000269485 FOXM1Q08050 763 aa13.35□□□□□ -0.27
TNFRSF11A-201ENST00000269485 EFR3AQ14156 821 aa13.35□□□□□ -0.27
TNFRSF11A-201ENST00000269485 HEPACAMQ14CZ8 416 aa13.35□□□□□ -0.27
TNFRSF11A-201ENST00000269485 RGNQ15493 299 aa13.35□□□□□ -0.27
TNFRSF11A-201ENST00000269485 ZZZ3Q8IYH5 903 aa13.35□□□□□ -0.27
TNFRSF11A-201ENST00000269485 KCNH6Q9H252 994 aa13.35□□□□□ -0.27
TNFRSF11A-201ENST00000269485 RDH8Q9NYR8 311 aa13.35□□□□□ -0.27
TNFRSF11A-201ENST00000269485 GDE1Q9NZC3 331 aa13.35□□□□□ -0.27
TNFRSF11A-201ENST00000269485 HCN2Q9UL51 889 aa13.35□□□□□ -0.27
TNFRSF11A-201ENST00000269485 SAMD4AQ9UPU9 718 aaKnown RBP13.35□□□□□ -0.27
TNFRSF11A-201ENST00000269485 GFYI3L273 518 aa13.34□□□□□ -0.27
TNFRSF11A-201ENST00000269485 KHNYNO15037 678 aaKnown RBP13.34□□□□□ -0.27
TNFRSF11A-201ENST00000269485 KCNAB1Q14722 419 aa13.34□□□□□ -0.27
TNFRSF11A-201ENST00000269485 RNASE12Q5GAN4 147 aaKnown RBP13.34□□□□□ -0.27
TNFRSF11A-201ENST00000269485 AGBL4Q5VU57 503 aa13.34□□□□□ -0.27
TNFRSF11A-201ENST00000269485 HORMAD2Q8N7B1 307 aa13.34□□□□□ -0.27
TNFRSF11A-201ENST00000269485 LINC01555Q8NAE3 123 aa13.34□□□□□ -0.27
TNFRSF11A-201ENST00000269485 IL17RDQ8NFM7 739 aa13.34□□□□□ -0.27
TNFRSF11A-201ENST00000269485 RERGQ96A58 199 aaPredicted RBP13.34□□□□□ -0.27
TNFRSF11A-201ENST00000269485 PPIL3Q9H2H8 161 aaKnown RBP13.34□□□□□ -0.27
TNFRSF11A-201ENST00000269485 CLEC4MQ9H2X3 399 aaPredicted RBP13.34□□□□□ -0.27
TNFRSF11A-201ENST00000269485 GTF2A1LQ9UNN4 478 aa13.34□□□□□ -0.27
TNFRSF11A-201ENST00000269485 AGAP14A8MT82 685 aa13.34□□□□□ -0.27
TNFRSF11A-201ENST00000269485 QSOX1O00391 747 aa13.34□□□□□ -0.27
TNFRSF11A-201ENST00000269485 CPNE6O95741 557 aa13.34□□□□□ -0.27
TNFRSF11A-201ENST00000269485 ZNF888P0CJ79 500 aaPredicted RBP13.34□□□□□ -0.27
TNFRSF11A-201ENST00000269485 THEGLP0DJG4 465 aa13.34□□□□□ -0.27
TNFRSF11A-201ENST00000269485 PPP2R1BP30154 601 aa13.34□□□□□ -0.27
TNFRSF11A-201ENST00000269485 TGM4P49221 684 aa13.34□□□□□ -0.27
TNFRSF11A-201ENST00000269485 PTPN5P54829 565 aa13.34□□□□□ -0.27
TNFRSF11A-201ENST00000269485 FAM131AQ6UXB0 335 aa13.34□□□□□ -0.27
TNFRSF11A-201ENST00000269485 IDO2Q6ZQW0 420 aa13.34□□□□□ -0.27
TNFRSF11A-201ENST00000269485 PTCHD4Q6ZW05 846 aa13.34□□□□□ -0.27
TNFRSF11A-201ENST00000269485 FAM3CQ92520 227 aa13.34□□□□□ -0.27
TNFRSF11A-201ENST00000269485 ING3Q9NXR8 418 aa13.34□□□□□ -0.27
TNFRSF11A-201ENST00000269485 CNIH4Q9P003 139 aa13.34□□□□□ -0.27
TNFRSF11A-201ENST00000269485 CPNE7Q9UBL6 633 aa13.34□□□□□ -0.27
TNFRSF11A-201ENST00000269485 SLC6A14Q9UN76 642 aa13.34□□□□□ -0.27
TNFRSF11A-201ENST00000269485 OPN1LWP04000 364 aa13.33□□□□□ -0.27
TNFRSF11A-201ENST00000269485 IGFALSP35858 605 aa13.33□□□□□ -0.27
TNFRSF11A-201ENST00000269485 BLVRAP53004 296 aa13.33□□□□□ -0.27
TNFRSF11A-201ENST00000269485 EIF4HQ15056 248 aaKnown RBP13.33□□□□□ -0.27
TNFRSF11A-201ENST00000269485 GXYLT1Q4G148 440 aa13.33□□□□□ -0.27
TNFRSF11A-201ENST00000269485 MLIPQ5VWP3 458 aa13.33□□□□□ -0.27
TNFRSF11A-201ENST00000269485 ZBTB44Q8NCP5 570 aa13.33□□□□□ -0.27
TNFRSF11A-201ENST00000269485 SMAP2Q8WU79 429 aaPredicted RBP13.33□□□□□ -0.27
TNFRSF11A-201ENST00000269485 COQ10AQ96MF6 247 aa13.33□□□□□ -0.27
TNFRSF11A-201ENST00000269485 OR51E2Q9H255 320 aa13.33□□□□□ -0.27
TNFRSF11A-201ENST00000269485 GLTPQ9NZD2 209 aa13.33□□□□□ -0.27
TNFRSF11A-201ENST00000269485 MAFFQ9ULX9 164 aa13.33□□□□□ -0.27
TNFRSF11A-201ENST00000269485 ZNF780BQ9Y6R6 833 aa13.33□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms