RNA–Protein interactions for RNA: ENST00000264883.7

NUP54-201, Transcript of nucleoporin 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP54, Length 2,367 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-201ENST00000264883 H7C4K7 107 aa12.4□□□□□ -0.42
NUP54-201ENST00000264883 AIPO00170 330 aa12.4□□□□□ -0.42
NUP54-201ENST00000264883 PCDH7O60245 1069 aa12.4□□□□□ -0.42
NUP54-201ENST00000264883 SOCS5O75159 536 aa12.4□□□□□ -0.42
NUP54-201ENST00000264883 TRBC1P01850 177 aa12.4□□□□□ -0.42
NUP54-201ENST00000264883 CXCL10P02778 98 aa12.4□□□□□ -0.42
NUP54-201ENST00000264883 IGFBP1P08833 259 aaPredicted RBP12.4□□□□□ -0.42
NUP54-201ENST00000264883 C1SP09871 688 aa12.4□□□□□ -0.42
NUP54-201ENST00000264883 OSMP13725 252 aa12.4□□□□□ -0.42
NUP54-201ENST00000264883 ITPKAP23677 461 aa12.4□□□□□ -0.42
NUP54-201ENST00000264883 CSKP41240 450 aa12.4□□□□□ -0.42
NUP54-201ENST00000264883 CXorf57Q6NSI4 855 aaKnown RBP12.4□□□□□ -0.42
NUP54-201ENST00000264883 USP45Q70EL2 814 aa12.4□□□□□ -0.42
NUP54-201ENST00000264883 UBE2R2Q712K3 238 aaPredicted RBP12.4□□□□□ -0.42
NUP54-201ENST00000264883 OR8J1Q8NGP2 316 aa12.4□□□□□ -0.42
NUP54-201ENST00000264883 CXorf40BQ96DE9 158 aa12.4□□□□□ -0.42
NUP54-201ENST00000264883 METTL17Q9H7H0 456 aaPredicted RBP12.4□□□□□ -0.42
NUP54-201ENST00000264883 IMP3Q9NV31 184 aaKnown RBP12.4□□□□□ -0.42
NUP54-201ENST00000264883 TRDV1A0A1B0GX56 115 aa12.4□□□□□ -0.43
NUP54-201ENST00000264883 POM121CA8CG34 1229 aa12.4□□□□□ -0.43
NUP54-201ENST00000264883 UPK3BL1B0FP48 263 aa12.4□□□□□ -0.43
NUP54-201ENST00000264883 UPK3BL2E5RIL1 263 aa12.4□□□□□ -0.43
NUP54-201ENST00000264883 H3BN98 237 aa12.4□□□□□ -0.43
NUP54-201ENST00000264883 SCAMP2O15127 329 aaKnown RBP12.4□□□□□ -0.43
NUP54-201ENST00000264883 YY2O15391 372 aa12.4□□□□□ -0.43
NUP54-201ENST00000264883 EEF1E1O43324 174 aaKnown RBP12.4□□□□□ -0.43
NUP54-201ENST00000264883 SIGLEC6O43699 453 aa12.4□□□□□ -0.43
NUP54-201ENST00000264883 SELENOFO60613 162 aa12.4□□□□□ -0.43
NUP54-201ENST00000264883 CSNK1DP48730 415 aa12.4□□□□□ -0.43
NUP54-201ENST00000264883 SRP9P49458 86 aaKnown RBP12.4□□□□□ -0.43
NUP54-201ENST00000264883 OCLNQ16625 522 aa12.4□□□□□ -0.43
NUP54-201ENST00000264883 GSG1Q2KHT4 349 aa12.4□□□□□ -0.43
NUP54-201ENST00000264883 HECTD3Q5T447 861 aa12.4□□□□□ -0.43
NUP54-201ENST00000264883 C12orf73Q69YU5 71 aa12.4□□□□□ -0.43
NUP54-201ENST00000264883 FGD2Q7Z6J4 655 aa12.4□□□□□ -0.43
NUP54-201ENST00000264883 CLDN19Q8N6F1 224 aa12.4□□□□□ -0.43
NUP54-201ENST00000264883 CDC26Q8NHZ8 85 aa12.4□□□□□ -0.43
NUP54-201ENST00000264883 SLC22A8Q8TCC7 542 aa12.4□□□□□ -0.43
NUP54-201ENST00000264883 DUSP26Q9BV47 211 aa12.4□□□□□ -0.43
NUP54-201ENST00000264883 SARGQ9BW04 601 aa12.4□□□□□ -0.43
NUP54-201ENST00000264883 ZDHHC3Q9NYG2 299 aa12.4□□□□□ -0.43
NUP54-201ENST00000264883 NDOR1Q9UHB4 597 aa12.4□□□□□ -0.43
NUP54-201ENST00000264883 C1orf226A1L170 272 aa12.39□□□□□ -0.43
NUP54-201ENST00000264883 C2orf78A6NCI8 922 aa12.39□□□□□ -0.43
NUP54-201ENST00000264883 FAM74A7A6NL05 159 aa12.39□□□□□ -0.43
NUP54-201ENST00000264883 TEX46H3BTG2 121 aa12.39□□□□□ -0.43
NUP54-201ENST00000264883 YKT6O15498 198 aa12.39□□□□□ -0.43
NUP54-201ENST00000264883 LATS1O95835 1130 aa12.39□□□□□ -0.43
NUP54-201ENST00000264883 POU3F2P20265 443 aaPredicted RBP12.39□□□□□ -0.43
NUP54-201ENST00000264883 AOAHP28039 575 aa12.39□□□□□ -0.43
NUP54-201ENST00000264883 CORO1AP31146 461 aaKnown RBP12.39□□□□□ -0.43
NUP54-201ENST00000264883 MEOX2P50222 304 aa12.39□□□□□ -0.43
NUP54-201ENST00000264883 EPHA4P54764 986 aa12.39□□□□□ -0.43
NUP54-201ENST00000264883 KIAA1024LP59773 190 aa12.39□□□□□ -0.43
NUP54-201ENST00000264883 ZP1P60852 638 aa12.39□□□□□ -0.43
NUP54-201ENST00000264883 FAM74A3Q4VXF1 159 aa12.39□□□□□ -0.43
NUP54-201ENST00000264883 PABPC1L2AQ5JQF8 200 aa12.39□□□□□ -0.43
NUP54-201ENST00000264883 TCTE1Q5JU00 501 aa12.39□□□□□ -0.43
NUP54-201ENST00000264883 CD200R1LQ6Q8B3 271 aa12.39□□□□□ -0.43
NUP54-201ENST00000264883 ANGPTL8Q6UXH0 198 aa12.39□□□□□ -0.43
NUP54-201ENST00000264883 HSD17B13Q7Z5P4 300 aaPredicted RBP12.39□□□□□ -0.43
NUP54-201ENST00000264883 ZFP41Q8N8Y5 198 aa12.39□□□□□ -0.43
NUP54-201ENST00000264883 NEIL3Q8TAT5 605 aa12.39□□□□□ -0.43
NUP54-201ENST00000264883 SLC5A11Q8WWX8 675 aa12.39□□□□□ -0.43
NUP54-201ENST00000264883 GEMIN6Q8WXD5 167 aaKnown RBP12.39□□□□□ -0.43
NUP54-201ENST00000264883 ADAMTS14Q8WXS8 1223 aa12.39□□□□□ -0.43
NUP54-201ENST00000264883 SLC19A3Q9BZV2 496 aa12.39□□□□□ -0.43
NUP54-201ENST00000264883 SPRTNQ9H040 489 aaPredicted RBP12.39□□□□□ -0.43
NUP54-201ENST00000264883 RNF32Q9H0A6 362 aa12.39□□□□□ -0.43
NUP54-201ENST00000264883 VPS29Q9UBQ0 182 aa12.39□□□□□ -0.43
NUP54-201ENST00000264883 REV1Q9UBZ9 1251 aa12.39□□□□□ -0.43
NUP54-201ENST00000264883 MGAT4BQ9UQ53 548 aa12.39□□□□□ -0.43
NUP54-201ENST00000264883 PRG3Q9Y2Y8 225 aaPredicted RBP12.39□□□□□ -0.43
NUP54-201ENST00000264883 NPTNQ9Y639 398 aa12.39□□□□□ -0.43
NUP54-201ENST00000264883 SCN8AQ9UQD0 1980 aa12.39□□□□□ -0.43
NUP54-201ENST00000264883 LOC101059915A0A1B0GWI6 518 aaPredicted RBP12.38□□□□□ -0.43
NUP54-201ENST00000264883 H7C2Y5 167 aa12.38□□□□□ -0.43
NUP54-201ENST00000264883 SRPRAP08240 638 aaKnown RBP12.38□□□□□ -0.43
NUP54-201ENST00000264883 ALPIP09923 528 aa12.38□□□□□ -0.43
NUP54-201ENST00000264883 LAMP1P11279 417 aa12.38□□□□□ -0.43
NUP54-201ENST00000264883 PEPDP12955 493 aa12.38□□□□□ -0.43
NUP54-201ENST00000264883 RPL17P18621 184 aaKnown RBP12.38□□□□□ -0.43
NUP54-201ENST00000264883 GIFP27352 417 aa12.38□□□□□ -0.43
NUP54-201ENST00000264883 CRATP43155 626 aa12.38□□□□□ -0.43
NUP54-201ENST00000264883 SELENOPP49908 381 aa12.38□□□□□ -0.43
NUP54-201ENST00000264883 TLE2Q04725 743 aa12.38□□□□□ -0.43
NUP54-201ENST00000264883 ILKQ13418 452 aa12.38□□□□□ -0.43
NUP54-201ENST00000264883 GRIN2CQ14957 1233 aa12.38□□□□□ -0.43
NUP54-201ENST00000264883 CHRNA6Q15825 494 aa12.38□□□□□ -0.43
NUP54-201ENST00000264883 ZNF770Q6IQ21 691 aaPredicted RBP12.38□□□□□ -0.43
NUP54-201ENST00000264883 MBOAT1Q6ZNC8 495 aa12.38□□□□□ -0.43
NUP54-201ENST00000264883 MARCH9Q86YJ5 346 aa12.38□□□□□ -0.43
NUP54-201ENST00000264883 NPAS3Q8IXF0 933 aa12.38□□□□□ -0.43
NUP54-201ENST00000264883 HUS1BQ8NHY5 278 aa12.38□□□□□ -0.43
NUP54-201ENST00000264883 UBL7Q96S82 380 aaPredicted RBP12.38□□□□□ -0.43
NUP54-201ENST00000264883 SAP130Q9H0E3 1048 aa12.38□□□□□ -0.43
NUP54-201ENST00000264883 BRF2Q9HAW0 419 aa12.38□□□□□ -0.43
NUP54-201ENST00000264883 SLC9A8Q9Y2E8 581 aa12.38□□□□□ -0.43
NUP54-201ENST00000264883 PCDHB7Q9Y5E2 793 aa12.38□□□□□ -0.43
NUP54-201ENST00000264883 SHISA3A0PJX4 238 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms