RNA–Protein interactions for RNA: ENST00000264012.8

CDH3-201, Transcript of cadherin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDH3, Length 4,929 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-201ENST00000264012 KIR2DS3K7RE56 304 aa13.26□□□□□ -0.29
CDH3-201ENST00000264012 MAGEA8P43361 318 aa13.26□□□□□ -0.29
CDH3-201ENST00000264012 MTNR1AP48039 350 aa13.26□□□□□ -0.29
CDH3-201ENST00000264012 CLRN1P58418 232 aa13.26□□□□□ -0.29
CDH3-201ENST00000264012 KIR2DS5Q14953 304 aa13.26□□□□□ -0.29
CDH3-201ENST00000264012 SCGB2B2Q4G0G5 96 aa13.26□□□□□ -0.29
CDH3-201ENST00000264012 TANGO2Q6ICL3 276 aa13.26□□□□□ -0.29
CDH3-201ENST00000264012 ZNF613Q6PF04 617 aa13.26□□□□□ -0.29
CDH3-201ENST00000264012 DENND6BQ8NEG7 585 aa13.26□□□□□ -0.29
CDH3-201ENST00000264012 KIAA1143Q96AT1 154 aaPredicted RBP13.26□□□□□ -0.29
CDH3-201ENST00000264012 HHIPQ96QV1 700 aa13.26□□□□□ -0.29
CDH3-201ENST00000264012 FUZQ9BT04 418 aa13.26□□□□□ -0.29
CDH3-201ENST00000264012 LDAHQ9H6V9 325 aa13.26□□□□□ -0.29
CDH3-201ENST00000264012 GORASP2Q9H8Y8 452 aa13.26□□□□□ -0.29
CDH3-201ENST00000264012 EIF3KQ9UBQ5 218 aaKnown RBP13.26□□□□□ -0.29
CDH3-201ENST00000264012 FTSJ1Q9UET6 329 aa13.26□□□□□ -0.29
CDH3-201ENST00000264012 ST14Q9Y5Y6 855 aa13.26□□□□□ -0.29
CDH3-201ENST00000264012 SH3D21A4FU49 640 aa13.25□□□□□ -0.29
CDH3-201ENST00000264012 POLR1CO15160 346 aaPredicted RBP13.25□□□□□ -0.29
CDH3-201ENST00000264012 KIAA0513O60268 411 aa13.25□□□□□ -0.29
CDH3-201ENST00000264012 JRKO75564 520 aa13.25□□□□□ -0.29
CDH3-201ENST00000264012 C22orf42Q6IC83 251 aa13.25□□□□□ -0.29
CDH3-201ENST00000264012 CEACAM19Q7Z692 300 aa13.25□□□□□ -0.29
CDH3-201ENST00000264012 ITPKCQ96DU7 683 aa13.25□□□□□ -0.29
CDH3-201ENST00000264012 MROQ9BYG7 248 aa13.25□□□□□ -0.29
CDH3-201ENST00000264012 ALOXE3Q9BYJ1 711 aa13.25□□□□□ -0.29
CDH3-201ENST00000264012 TAS2R10Q9NYW0 307 aa13.25□□□□□ -0.29
CDH3-201ENST00000264012 RIMS3Q9UJD0 308 aa13.25□□□□□ -0.29
CDH3-201ENST00000264012 TMEM14AQ9Y6G1 99 aa13.25□□□□□ -0.29
CDH3-201ENST00000264012 RDH16O75452 317 aa13.25□□□□□ -0.29
CDH3-201ENST00000264012 PRKCAP17252 672 aa13.25□□□□□ -0.29
CDH3-201ENST00000264012 C1orf94Q6P1W5 598 aa13.25□□□□□ -0.29
CDH3-201ENST00000264012 PRSS48Q7RTY5 328 aa13.25□□□□□ -0.29
CDH3-201ENST00000264012 KLBQ86Z14 1044 aa13.25□□□□□ -0.29
CDH3-201ENST00000264012 ZNF548Q8NEK5 533 aaPredicted RBP13.25□□□□□ -0.29
CDH3-201ENST00000264012 OR5D16Q8NGK9 328 aa13.25□□□□□ -0.29
CDH3-201ENST00000264012 SPPL3Q8TCT6 385 aa13.25□□□□□ -0.29
CDH3-201ENST00000264012 LPAR4Q99677 370 aa13.25□□□□□ -0.29
CDH3-201ENST00000264012 SLAMF8Q9P0V8 285 aa13.25□□□□□ -0.29
CDH3-201ENST00000264012 EBF1Q9UH73 591 aa13.25□□□□□ -0.29
CDH3-201ENST00000264012 CARD8Q9Y2G2 431 aa13.25□□□□□ -0.29
CDH3-201ENST00000264012 HSD17B12Q53GQ0 312 aa13.25□□□□□ -0.29
CDH3-201ENST00000264012 IQCF1Q8N6M8 205 aa13.25□□□□□ -0.29
CDH3-201ENST00000264012 ARRDC3Q96B67 414 aa13.25□□□□□ -0.29
CDH3-201ENST00000264012 CUEDC1Q9NWM3 386 aaPredicted RBP13.25□□□□□ -0.29
CDH3-201ENST00000264012 EXTL2Q9UBQ6 330 aa13.25□□□□□ -0.29
CDH3-201ENST00000264012 IL20RAQ9UHF4 553 aa13.25□□□□□ -0.29
CDH3-201ENST00000264012 GPR52Q9Y2T5 361 aa13.25□□□□□ -0.29
CDH3-201ENST00000264012 C17orf113A0A1B0GUU1 675 aa13.25□□□□□ -0.29
CDH3-201ENST00000264012 ZNF878C9JN71 531 aa13.25□□□□□ -0.29
CDH3-201ENST00000264012 PLOD2O00469 737 aa13.25□□□□□ -0.29
CDH3-201ENST00000264012 TPD52L2O43399 206 aaKnown RBP13.25□□□□□ -0.29
CDH3-201ENST00000264012 TRAM1Q15629 374 aa13.25□□□□□ -0.29
CDH3-201ENST00000264012 TBC1D25Q3MII6 688 aa13.25□□□□□ -0.29
CDH3-201ENST00000264012 C6orf132Q5T0Z8 1188 aa13.25□□□□□ -0.29
CDH3-201ENST00000264012 PGBD2Q6P3X8 592 aa13.25□□□□□ -0.29
CDH3-201ENST00000264012 RSPO2Q6UXX9 243 aaPredicted RBP13.25□□□□□ -0.29
CDH3-201ENST00000264012 PAQR7Q86WK9 346 aa13.25□□□□□ -0.29
CDH3-201ENST00000264012 MFSD6LQ8IWD5 586 aa13.25□□□□□ -0.29
CDH3-201ENST00000264012 METTL25Q8N6Q8 603 aa13.25□□□□□ -0.29
CDH3-201ENST00000264012 LMNTD1Q8N9Z9 388 aa13.25□□□□□ -0.29
CDH3-201ENST00000264012 WFDC5Q8TCV5 224 aa13.25□□□□□ -0.29
CDH3-201ENST00000264012 TMEM30AQ9NV96 361 aa13.25□□□□□ -0.29
CDH3-201ENST00000264012 LAMB1P07942 1786 aa13.25□□□□□ -0.29
CDH3-201ENST00000264012 C5orf51A6NDU8 294 aa13.24□□□□□ -0.29
CDH3-201ENST00000264012 CLCA1A8K7I4 914 aa13.24□□□□□ -0.29
CDH3-201ENST00000264012 ZNF432O94892 652 aa13.24□□□□□ -0.29
CDH3-201ENST00000264012 FCER2P06734 321 aa13.24□□□□□ -0.29
CDH3-201ENST00000264012 POU4F2Q12837 409 aa13.24□□□□□ -0.29
CDH3-201ENST00000264012 SERTAD2Q14140 314 aa13.24□□□□□ -0.29
CDH3-201ENST00000264012 ABCA11PQ4W5N1 156 aa13.24□□□□□ -0.29
CDH3-201ENST00000264012 TRUB1Q8WWH5 349 aaKnown RBP13.24□□□□□ -0.29
CDH3-201ENST00000264012 NELL2Q99435 816 aa13.24□□□□□ -0.29
CDH3-201ENST00000264012 NUMA1Q14980 2115 aa13.24□□□□□ -0.29
CDH3-201ENST00000264012 A0A0A6YYC8 382 aaPredicted RBP13.24□□□□□ -0.29
CDH3-201ENST00000264012 A0A1W2PPK0 400 aa13.24□□□□□ -0.29
CDH3-201ENST00000264012 I3L1I5 382 aaPredicted RBP13.24□□□□□ -0.29
CDH3-201ENST00000264012 FBP2O00757 339 aa13.24□□□□□ -0.29
CDH3-201ENST00000264012 HIST1H1TP22492 207 aaPredicted RBP13.24□□□□□ -0.29
CDH3-201ENST00000264012 ACVR1BP36896 505 aa13.24□□□□□ -0.29
CDH3-201ENST00000264012 CD83Q01151 205 aa13.24□□□□□ -0.29
CDH3-201ENST00000264012 PRDX1Q06830 199 aaKnown RBP13.24□□□□□ -0.29
CDH3-201ENST00000264012 PROX2Q3B8N5 592 aa13.24□□□□□ -0.29
CDH3-201ENST00000264012 EEF1AKMT2Q5JPI9 291 aaKnown RBP13.24□□□□□ -0.29
CDH3-201ENST00000264012 RETREG3Q86VR2 466 aa13.24□□□□□ -0.29
CDH3-201ENST00000264012 ZNF283Q8N7M2 679 aa13.24□□□□□ -0.29
CDH3-201ENST00000264012 OR52E2Q8NGJ4 325 aa13.24□□□□□ -0.29
CDH3-201ENST00000264012 WDR83Q9BRX9 315 aaKnown RBP13.24□□□□□ -0.29
CDH3-201ENST00000264012 EPHA6Q9UF33 1036 aa13.24□□□□□ -0.29
CDH3-201ENST00000264012 MYO5AQ9Y4I1 1855 aaKnown RBP13.24□□□□□ -0.29
CDH3-201ENST00000264012 CACNG3O60359 315 aa13.24□□□□□ -0.29
CDH3-201ENST00000264012 PTGER1P34995 402 aa13.24□□□□□ -0.29
CDH3-201ENST00000264012 DEFB133Q30KQ1 61 aa13.24□□□□□ -0.29
CDH3-201ENST00000264012 PRAMEF17Q5VTA0 474 aa13.24□□□□□ -0.29
CDH3-201ENST00000264012 PLBD1Q6P4A8 553 aa13.24□□□□□ -0.29
CDH3-201ENST00000264012 DCP2Q8IU60 420 aaKnown RBP13.24□□□□□ -0.29
CDH3-201ENST00000264012 TMEM151BQ8IW70 566 aa13.24□□□□□ -0.29
CDH3-201ENST00000264012 VWA5B2Q8N398 1253 aa13.24□□□□□ -0.29
CDH3-201ENST00000264012 ZFP41Q8N8Y5 198 aa13.24□□□□□ -0.29
CDH3-201ENST00000264012 TOR1AIP2Q8NFQ8 470 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 61.7 ms