RNA–Protein interactions for RNA: ENST00000263741.11

SDF4-201, Transcript of stromal cell derived factor 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SDF4, Length 2,079 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-201ENST00000263741 MAPRE3Q9UPY8 281 aa16.97■□□□□ 0.31
SDF4-201ENST00000263741 HEMK1Q9Y5R4 338 aaPredicted RBP16.97■□□□□ 0.31
SDF4-201ENST00000263741 PLOD2O00469 737 aa16.96■□□□□ 0.31
SDF4-201ENST00000263741 C1QCP02747 245 aa16.96■□□□□ 0.31
SDF4-201ENST00000263741 SOX3P41225 446 aa16.96■□□□□ 0.31
SDF4-201ENST00000263741 OC90Q02509 493 aaPredicted RBP16.96■□□□□ 0.31
SDF4-201ENST00000263741 UBAP2LQ14157 1087 aaKnown RBP16.96■□□□□ 0.31
SDF4-201ENST00000263741 IGFL2Q6UWQ7 119 aa16.96■□□□□ 0.31
SDF4-201ENST00000263741 OR4A15Q8NGL6 344 aa16.96■□□□□ 0.31
SDF4-201ENST00000263741 NUBPLQ8TB37 319 aa16.96■□□□□ 0.31
SDF4-201ENST00000263741 STMN2Q93045 179 aa16.96■□□□□ 0.31
SDF4-201ENST00000263741 ADIPOR1Q96A54 375 aa16.96■□□□□ 0.31
SDF4-201ENST00000263741 FAM120BQ96EK7 910 aaKnown RBP16.96■□□□□ 0.31
SDF4-201ENST00000263741 SIGLEC12Q96PQ1 595 aa16.96■□□□□ 0.31
SDF4-201ENST00000263741 CADM1Q9BY67 442 aaKnown RBP16.96■□□□□ 0.31
SDF4-201ENST00000263741 C19orf53Q9UNZ5 99 aaPredicted RBP16.96■□□□□ 0.31
SDF4-201ENST00000263741 LRRC42Q9Y546 428 aa16.96■□□□□ 0.31
SDF4-201ENST00000263741 OR6C76A6NM76 312 aa16.95■□□□□ 0.3
SDF4-201ENST00000263741 FCHO1O14526 889 aa16.95■□□□□ 0.3
SDF4-201ENST00000263741 OR6B1O95007 311 aa16.95■□□□□ 0.3
SDF4-201ENST00000263741 NADKO95544 446 aaPredicted RBP16.95■□□□□ 0.3
SDF4-201ENST00000263741 CDKN2CP42773 168 aa16.95■□□□□ 0.3
SDF4-201ENST00000263741 NFATC3Q12968 1075 aa16.95■□□□□ 0.3
SDF4-201ENST00000263741 GAB1Q13480 694 aa16.95■□□□□ 0.3
SDF4-201ENST00000263741 TUBA3CQ13748 450 aa16.95■□□□□ 0.3
SDF4-201ENST00000263741 DPY19L1Q2PZI1 675 aa16.95■□□□□ 0.3
SDF4-201ENST00000263741 AGKQ53H12 422 aa16.95■□□□□ 0.3
SDF4-201ENST00000263741 HLA-DQA1Q5Y7H0 255 aa16.95■□□□□ 0.3
SDF4-201ENST00000263741 TUBA3EQ6PEY2 450 aa16.95■□□□□ 0.3
SDF4-201ENST00000263741 GK5Q6ZS86 529 aa16.95■□□□□ 0.3
SDF4-201ENST00000263741 ARMC10Q8N2F6 343 aa16.95■□□□□ 0.3
SDF4-201ENST00000263741 ZNF441Q8N8Z8 693 aa16.95■□□□□ 0.3
SDF4-201ENST00000263741 OR5L2Q8NGL0 311 aa16.95■□□□□ 0.3
SDF4-201ENST00000263741 HES7Q9BYE0 225 aa16.95■□□□□ 0.3
SDF4-201ENST00000263741 ZCCHC3Q9NUD5 404 aaKnown RBP16.95■□□□□ 0.3
SDF4-201ENST00000263741 NINQ8N4C6 2090 aa16.95■□□□□ 0.3
SDF4-201ENST00000263741 A0A087WV62 115 aa16.95■□□□□ 0.3
SDF4-201ENST00000263741 RNASET2O00584 256 aaKnown RBP16.95■□□□□ 0.3
SDF4-201ENST00000263741 PSMG1O95456 288 aa16.95■□□□□ 0.3
SDF4-201ENST00000263741 MLC1Q15049 377 aa16.95■□□□□ 0.3
SDF4-201ENST00000263741 SPDYE7PQ495Y7 208 aa16.95■□□□□ 0.3
SDF4-201ENST00000263741 NPSR1Q6W5P4 371 aa16.95■□□□□ 0.3
SDF4-201ENST00000263741 GLB1L3Q8NCI6 653 aaPredicted RBP16.95■□□□□ 0.3
SDF4-201ENST00000263741 SLC39A7Q92504 469 aa16.95■□□□□ 0.3
SDF4-201ENST00000263741 VSTM2LQ96N03 204 aa16.95■□□□□ 0.3
SDF4-201ENST00000263741 YIPF4Q9BSR8 244 aa16.95■□□□□ 0.3
SDF4-201ENST00000263741 FAM120CQ9NX05 1096 aaKnown RBP16.95■□□□□ 0.3
SDF4-201ENST00000263741 DYTNA2CJ06 578 aa16.94■□□□□ 0.3
SDF4-201ENST00000263741 FAM234BA2RU67 622 aa16.94■□□□□ 0.3
SDF4-201ENST00000263741 OR5H15A6NDH6 313 aa16.94■□□□□ 0.3
SDF4-201ENST00000263741 GSC2O15499 205 aa16.94■□□□□ 0.3
SDF4-201ENST00000263741 GSNP06396 782 aa16.94■□□□□ 0.3
SDF4-201ENST00000263741 ATP6V1C1P21283 382 aa16.94■□□□□ 0.3
SDF4-201ENST00000263741 CD96P40200 585 aa16.94■□□□□ 0.3
SDF4-201ENST00000263741 SSR4P51571 173 aa16.94■□□□□ 0.3
SDF4-201ENST00000263741 TP53BP2Q13625 1128 aa16.94■□□□□ 0.3
SDF4-201ENST00000263741 SPINK14Q6IE38 97 aa16.94■□□□□ 0.3
SDF4-201ENST00000263741 LGI4Q8N135 537 aa16.94■□□□□ 0.3
SDF4-201ENST00000263741 ZADH2Q8N4Q0 377 aa16.94■□□□□ 0.3
SDF4-201ENST00000263741 TMEM156Q8N614 296 aa16.94■□□□□ 0.3
SDF4-201ENST00000263741 NUP43Q8NFH3 380 aa16.94■□□□□ 0.3
SDF4-201ENST00000263741 WBP1Q96G27 269 aa16.94■□□□□ 0.3
SDF4-201ENST00000263741 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP16.94■□□□□ 0.32e-7■■■■□ 21.2
SDF4-201ENST00000263741 TAS2R9Q9NYW1 312 aa16.94■□□□□ 0.3
SDF4-201ENST00000263741 ABI3Q9P2A4 366 aa16.94■□□□□ 0.3
SDF4-201ENST00000263741 YARS2Q9Y2Z4 477 aaKnown RBP16.94■□□□□ 0.3
SDF4-201ENST00000263741 GIMAP1-GIMAP5A0A087WTJ2 511 aa16.93■□□□□ 0.3
SDF4-201ENST00000263741 PRSS51A0A1B0GVH4 220 aa16.93■□□□□ 0.3
SDF4-201ENST00000263741 ASPDHA6ND91 283 aa16.93■□□□□ 0.3
SDF4-201ENST00000263741 H0Y3Z8 333 aa16.93■□□□□ 0.3
SDF4-201ENST00000263741 COQ9O75208 318 aa16.93■□□□□ 0.3
SDF4-201ENST00000263741 ENTPD5O75356 428 aa16.93■□□□□ 0.3
SDF4-201ENST00000263741 ERN1O75460 977 aaKnown RBP16.93■□□□□ 0.3
SDF4-201ENST00000263741 SLITRK5O94991 958 aa16.93■□□□□ 0.3
SDF4-201ENST00000263741 ACADSP16219 412 aa16.93■□□□□ 0.3
SDF4-201ENST00000263741 CAPN3P20807 821 aa16.93■□□□□ 0.3
SDF4-201ENST00000263741 VHLP40337 213 aa16.93■□□□□ 0.3
SDF4-201ENST00000263741 PTDSS1P48651 473 aaKnown RBP16.93■□□□□ 0.3
SDF4-201ENST00000263741 MRPL19P49406 292 aaKnown RBP16.93■□□□□ 0.3
SDF4-201ENST00000263741 ATP4BP51164 291 aa16.93■□□□□ 0.3
SDF4-201ENST00000263741 CASP9P55211 416 aa16.93■□□□□ 0.3
SDF4-201ENST00000263741 RPS26P62854 115 aaKnown RBP16.93■□□□□ 0.3
SDF4-201ENST00000263741 BLMHQ13867 455 aa16.93■□□□□ 0.3
SDF4-201ENST00000263741 RCAN2Q14206 197 aa16.93■□□□□ 0.3
SDF4-201ENST00000263741 ANXA8L1Q5VT79 327 aa16.93■□□□□ 0.3
SDF4-201ENST00000263741 IGFL3Q6UXB1 125 aa16.93■□□□□ 0.3
SDF4-201ENST00000263741 IL20RBQ6UXL0 311 aa16.93■□□□□ 0.3
SDF4-201ENST00000263741 ZNF227Q86WZ6 799 aa16.93■□□□□ 0.3
SDF4-201ENST00000263741 OR5M3Q8NGP4 307 aa16.93■□□□□ 0.3
SDF4-201ENST00000263741 ASB15Q8WXK1 588 aa16.93■□□□□ 0.3
SDF4-201ENST00000263741 GIMAP5Q96F15 307 aa16.93■□□□□ 0.3
SDF4-201ENST00000263741 C16orf58Q96GQ5 468 aa16.93■□□□□ 0.3
SDF4-201ENST00000263741 UTP23Q9BRU9 249 aaKnown RBP16.93■□□□□ 0.3
SDF4-201ENST00000263741 NEUROD4Q9HD90 331 aa16.93■□□□□ 0.3
SDF4-201ENST00000263741 SLC6A13Q9NSD5 602 aa16.93■□□□□ 0.3
SDF4-201ENST00000263741 PRODH2Q9UF12 536 aa16.93■□□□□ 0.3
SDF4-201ENST00000263741 EMC8O43402 210 aa16.93■□□□□ 0.3
SDF4-201ENST00000263741 CCT3P49368 545 aaKnown RBP16.93■□□□□ 0.3
SDF4-201ENST00000263741 OR1C1Q15619 314 aa16.93■□□□□ 0.3
SDF4-201ENST00000263741 VPS26BQ4G0F5 336 aa16.93■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms