RNA–Protein interactions for RNA: ENST00000258909.13

TM6SF1-201, Transcript of transmembrane 6 superfamily member 1, humanhuman

TSL 1 (best)

Gene TM6SF1, Length 1,469 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM6SF1-201ENST00000258909 OSBPL11Q9BXB4 747 aa17.35■□□□□ 0.37
TM6SF1-201ENST00000258909 PRDM14Q9GZV8 571 aa17.35■□□□□ 0.37
TM6SF1-201ENST00000258909 SERHLQ9NQF3 203 aa17.35■□□□□ 0.37
TM6SF1-201ENST00000258909 PRODH2Q9UF12 536 aa17.35■□□□□ 0.37
TM6SF1-201ENST00000258909 ACOX3O15254 700 aa17.34■□□□□ 0.37
TM6SF1-201ENST00000258909 DRD5P21918 477 aa17.34■□□□□ 0.37
TM6SF1-201ENST00000258909 CEACAM8P31997 349 aaPredicted RBP17.34■□□□□ 0.37
TM6SF1-201ENST00000258909 PPICP45877 212 aa17.34■□□□□ 0.37
TM6SF1-201ENST00000258909 AGFG1P52594 562 aaKnown RBP17.34■□□□□ 0.37
TM6SF1-201ENST00000258909 ACSM2AQ08AH3 577 aa17.34■□□□□ 0.37
TM6SF1-201ENST00000258909 LCP2Q13094 533 aa17.34■□□□□ 0.37
TM6SF1-201ENST00000258909 ACSM2BQ68CK6 577 aa17.34■□□□□ 0.37
TM6SF1-201ENST00000258909 CCNYL1Q8N7R7 359 aa17.34■□□□□ 0.37
TM6SF1-201ENST00000258909 CEP112Q8N8E3 955 aa17.34■□□□□ 0.37
TM6SF1-201ENST00000258909 RDH11Q8TC12 318 aa17.34■□□□□ 0.37
TM6SF1-201ENST00000258909 C16orf78Q8WTQ4 265 aa17.34■□□□□ 0.37
TM6SF1-201ENST00000258909 ABTB1Q969K4 478 aaPredicted RBP17.34■□□□□ 0.37
TM6SF1-201ENST00000258909 WDYHV1Q96HA8 205 aa17.34■□□□□ 0.37
TM6SF1-201ENST00000258909 EPB41L4BQ9H329 900 aa17.34■□□□□ 0.37
TM6SF1-201ENST00000258909 DOCK7Q96N67 2140 aa17.34■□□□□ 0.37
TM6SF1-201ENST00000258909 ITPR3Q14573 2671 aa17.34■□□□□ 0.37
TM6SF1-201ENST00000258909 MPDZO75970 2070 aa17.34■□□□□ 0.37
TM6SF1-201ENST00000258909 MTORP42345 2549 aa17.33■□□□□ 0.37
TM6SF1-201ENST00000258909 A0A1W2PPM1 405 aa17.33■□□□□ 0.37
TM6SF1-201ENST00000258909 DVL2O14641 736 aa17.33■□□□□ 0.37
TM6SF1-201ENST00000258909 SNPHO15079 494 aa17.33■□□□□ 0.37
TM6SF1-201ENST00000258909 REM1O75628 298 aa17.33■□□□□ 0.37
TM6SF1-201ENST00000258909 DRD2P14416 443 aa17.33■□□□□ 0.37
TM6SF1-201ENST00000258909 ZNF136P52737 540 aa17.33■□□□□ 0.37
TM6SF1-201ENST00000258909 FOXA1P55317 472 aa17.33■□□□□ 0.37
TM6SF1-201ENST00000258909 CORO7P57737 925 aa17.33■□□□□ 0.37
TM6SF1-201ENST00000258909 NHSL2Q5HYW2 709 aa17.33■□□□□ 0.37
TM6SF1-201ENST00000258909 SLC30A6Q6NXT4 461 aa17.33■□□□□ 0.37
TM6SF1-201ENST00000258909 POMZP3Q6PJE2 187 aa17.33■□□□□ 0.37
TM6SF1-201ENST00000258909 LCA5Q86VQ0 697 aa17.33■□□□□ 0.37
TM6SF1-201ENST00000258909 LACC1Q8IV20 430 aa17.33■□□□□ 0.37
TM6SF1-201ENST00000258909 SLC22A9Q8IVM8 553 aa17.33■□□□□ 0.37
TM6SF1-201ENST00000258909 PM20D2Q8IYS1 436 aa17.33■□□□□ 0.37
TM6SF1-201ENST00000258909 GBP7Q8N8V2 638 aaPredicted RBP17.33■□□□□ 0.37
TM6SF1-201ENST00000258909 KIF18AQ8NI77 898 aa17.33■□□□□ 0.37
TM6SF1-201ENST00000258909 MZB1Q8WU39 189 aa17.33■□□□□ 0.37
TM6SF1-201ENST00000258909 L3HYPDHQ96EM0 354 aa17.33■□□□□ 0.37
TM6SF1-201ENST00000258909 TXLNGYQ9BZA5 131 aa17.33■□□□□ 0.37
TM6SF1-201ENST00000258909 GSTO2Q9H4Y5 243 aa17.33■□□□□ 0.37
TM6SF1-201ENST00000258909 CRIM1Q9NZV1 1036 aa17.33■□□□□ 0.37
TM6SF1-201ENST00000258909 PSMC3IPQ9P2W1 217 aaPredicted RBP17.33■□□□□ 0.37
TM6SF1-201ENST00000258909 EMCNQ9ULC0 261 aa17.33■□□□□ 0.37
TM6SF1-201ENST00000258909 GPR55Q9Y2T6 319 aaPredicted RBP17.33■□□□□ 0.37
TM6SF1-201ENST00000258909 C2CD3Q4AC94 2353 aa17.33■□□□□ 0.36
TM6SF1-201ENST00000258909 PRAMEF25A6NGN4 478 aa17.32■□□□□ 0.36
TM6SF1-201ENST00000258909 FRG2CA6NGY1 282 aa17.32■□□□□ 0.36
TM6SF1-201ENST00000258909 UBFD1O14562 309 aaKnown RBP17.32■□□□□ 0.36
TM6SF1-201ENST00000258909 IL2RAP01589 272 aa17.32■□□□□ 0.36
TM6SF1-201ENST00000258909 TIA1P31483 386 aaKnown RBP eCLIP17.32■□□□□ 0.36
TM6SF1-201ENST00000258909 KIR2DL3P43628 341 aa17.32■□□□□ 0.36
TM6SF1-201ENST00000258909 DCAF7P61962 342 aa17.32■□□□□ 0.36
TM6SF1-201ENST00000258909 SPIN4Q56A73 249 aa17.32■□□□□ 0.36
TM6SF1-201ENST00000258909 SPDYAQ5MJ70 313 aa17.32■□□□□ 0.36
TM6SF1-201ENST00000258909 NSUN5P2Q63ZY6 315 aa17.32■□□□□ 0.36
TM6SF1-201ENST00000258909 WDSUB1Q8N9V3 476 aa17.32■□□□□ 0.36
TM6SF1-201ENST00000258909 CDC26Q8NHZ8 85 aa17.32■□□□□ 0.36
TM6SF1-201ENST00000258909 ZNF675Q8TD23 568 aa17.32■□□□□ 0.36
TM6SF1-201ENST00000258909 COL21A1Q96P44 957 aa17.32■□□□□ 0.36
TM6SF1-201ENST00000258909 ADOQ96SZ5 270 aa17.32■□□□□ 0.36
TM6SF1-201ENST00000258909 SLC24A3Q9HC58 644 aa17.32■□□□□ 0.36
TM6SF1-201ENST00000258909 MID1IP1Q9NPA3 183 aa17.32■□□□□ 0.36
TM6SF1-201ENST00000258909 SYT5O00445 386 aa17.31■□□□□ 0.36
TM6SF1-201ENST00000258909 TO15178 435 aa17.31■□□□□ 0.36
TM6SF1-201ENST00000258909 CDH16O75309 829 aa17.31■□□□□ 0.36
TM6SF1-201ENST00000258909 ENO1P06733 434 aaKnown RBP17.31■□□□□ 0.36
TM6SF1-201ENST00000258909 CT45A8P0DMV1 189 aa17.31■□□□□ 0.36
TM6SF1-201ENST00000258909 CT45A9P0DMV2 189 aa17.31■□□□□ 0.36
TM6SF1-201ENST00000258909 TIMP3P35625 211 aa17.31■□□□□ 0.36
TM6SF1-201ENST00000258909 PKNOX1P55347 436 aa17.31■□□□□ 0.36
TM6SF1-201ENST00000258909 PRSS53Q2L4Q9 553 aa17.31■□□□□ 0.36
TM6SF1-201ENST00000258909 CT45A2Q5DJT8 189 aa17.31■□□□□ 0.36
TM6SF1-201ENST00000258909 TMEM81Q6P7N7 255 aa17.31■□□□□ 0.36
TM6SF1-201ENST00000258909 PLXDC2Q6UX71 529 aa17.31■□□□□ 0.36
TM6SF1-201ENST00000258909 ACMSDQ8TDX5 336 aa17.31■□□□□ 0.36
TM6SF1-201ENST00000258909 SH3GL2Q99962 352 aa17.31■□□□□ 0.36
TM6SF1-201ENST00000258909 SLC35C2Q9NQQ7 365 aa17.31■□□□□ 0.36
TM6SF1-201ENST00000258909 DNAJB12Q9NXW2 375 aaKnown RBP17.31■□□□□ 0.36
TM6SF1-201ENST00000258909 EXO1Q9UQ84 846 aaKnown RBP17.31■□□□□ 0.36
TM6SF1-201ENST00000258909 STK38LQ9Y2H1 464 aa17.31■□□□□ 0.36
TM6SF1-201ENST00000258909 G3V2L1 256 aa17.31■□□□□ 0.36
TM6SF1-201ENST00000258909 KIF2AO00139 706 aaPredicted RBP17.31■□□□□ 0.36
TM6SF1-201ENST00000258909 CTAG2O75638 210 aa17.31■□□□□ 0.36
TM6SF1-201ENST00000258909 GSTA1P08263 222 aa17.31■□□□□ 0.36
TM6SF1-201ENST00000258909 ANXA4P09525 319 aaPredicted RBP17.31■□□□□ 0.36
TM6SF1-201ENST00000258909 TCEA1P23193 301 aaKnown RBP17.31■□□□□ 0.36
TM6SF1-201ENST00000258909 DNAJA1P31689 397 aaKnown RBP17.31■□□□□ 0.36
TM6SF1-201ENST00000258909 SLCO1A2P46721 670 aa17.31■□□□□ 0.36
TM6SF1-201ENST00000258909 ASCL1P50553 236 aa17.31■□□□□ 0.36
TM6SF1-201ENST00000258909 SRYQ05066 204 aa17.31■□□□□ 0.36
TM6SF1-201ENST00000258909 SNTA1Q13424 505 aa17.31■□□□□ 0.36
TM6SF1-201ENST00000258909 HEPACAMQ14CZ8 416 aa17.31■□□□□ 0.36
TM6SF1-201ENST00000258909 OR5M10Q6IEU7 315 aa17.31■□□□□ 0.36
TM6SF1-201ENST00000258909 NPSR1Q6W5P4 371 aa17.31■□□□□ 0.36
TM6SF1-201ENST00000258909 LRRN4CLQ8ND94 238 aa17.31■□□□□ 0.36
TM6SF1-201ENST00000258909 OR7G2Q8NG99 324 aa17.31■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms