RNA–Protein interactions for RNA: ENST00000253193.8

LRP3-201, Transcript of LDL receptor related protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRP3, Length 3,807 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP3-201ENST00000253193 TRMT61AQ96FX7 289 aaKnown RBP17.38■□□□□ 0.37
LRP3-201ENST00000253193 FZD3Q9NPG1 666 aa17.38■□□□□ 0.37
LRP3-201ENST00000253193 TSC22D2O75157 780 aa17.38■□□□□ 0.37
LRP3-201ENST00000253193 NTN1O95631 604 aa17.38■□□□□ 0.37
LRP3-201ENST00000253193 GNSP15586 552 aa17.38■□□□□ 0.37
LRP3-201ENST00000253193 CAMK1Q14012 370 aa17.38■□□□□ 0.37
LRP3-201ENST00000253193 SNAP47Q5SQN1 464 aa17.38■□□□□ 0.37
LRP3-201ENST00000253193 OR9A2Q8NGT5 310 aa17.38■□□□□ 0.37
LRP3-201ENST00000253193 IGFLR1Q9H665 355 aa17.38■□□□□ 0.37
LRP3-201ENST00000253193 REV1Q9UBZ9 1251 aa17.38■□□□□ 0.37
LRP3-201ENST00000253193 PLEKHM1Q9Y4G2 1056 aa17.38■□□□□ 0.37
LRP3-201ENST00000253193 CSNK1G3Q9Y6M4 447 aa17.38■□□□□ 0.37
LRP3-201ENST00000253193 THSD7BQ9C0I4 1608 aa17.38■□□□□ 0.37
LRP3-201ENST00000253193 LOC105378220A0A1B0GUY1 285 aaPredicted RBP17.38■□□□□ 0.37
LRP3-201ENST00000253193 C2orf92A0A1B0GVN3 265 aa17.38■□□□□ 0.37
LRP3-201ENST00000253193 CD8B2A6NJW9 211 aa17.38■□□□□ 0.37
LRP3-201ENST00000253193 NCR1O76036 304 aa17.38■□□□□ 0.37
LRP3-201ENST00000253193 CD8BP10966 210 aa17.38■□□□□ 0.37
LRP3-201ENST00000253193 GSTM3P21266 225 aa17.38■□□□□ 0.37
LRP3-201ENST00000253193 CHRNEQ04844 493 aa17.38■□□□□ 0.37
LRP3-201ENST00000253193 COX10Q12887 443 aa17.38■□□□□ 0.37
LRP3-201ENST00000253193 MLLT11Q13015 90 aaPredicted RBP17.38■□□□□ 0.37
LRP3-201ENST00000253193 WSCD2Q2TBF2 565 aa17.38■□□□□ 0.37
LRP3-201ENST00000253193 PIP5KL1Q5T9C9 394 aa17.38■□□□□ 0.37
LRP3-201ENST00000253193 NUP43Q8NFH3 380 aa17.38■□□□□ 0.37
LRP3-201ENST00000253193 WDR34Q96EX3 536 aa17.38■□□□□ 0.37
LRP3-201ENST00000253193 NECTIN4Q96NY8 510 aa17.38■□□□□ 0.37
LRP3-201ENST00000253193 INSM2Q96T92 566 aaPredicted RBP17.38■□□□□ 0.37
LRP3-201ENST00000253193 BARHL1Q9BZE3 327 aa17.38■□□□□ 0.37
LRP3-201ENST00000253193 NXF2Q9GZY0 626 aaKnown RBP17.38■□□□□ 0.37
LRP3-201ENST00000253193 PELI2Q9HAT8 420 aa17.38■□□□□ 0.37
LRP3-201ENST00000253193 MRPS7Q9Y2R9 242 aaKnown RBP17.38■□□□□ 0.37
LRP3-201ENST00000253193 ATG4BQ9Y4P1 393 aa17.38■□□□□ 0.37
LRP3-201ENST00000253193 MEIOCA2RUB1 952 aa17.37■□□□□ 0.37
LRP3-201ENST00000253193 FAM183AA6NL82 134 aa17.37■□□□□ 0.37
LRP3-201ENST00000253193 TIMP1P01033 207 aa17.37■□□□□ 0.37
LRP3-201ENST00000253193 NDUFA9Q16795 377 aa17.37■□□□□ 0.37
LRP3-201ENST00000253193 LCN1P1Q5VSP4 162 aa17.37■□□□□ 0.37
LRP3-201ENST00000253193 ACOT4Q8N9L9 421 aa17.37■□□□□ 0.37
LRP3-201ENST00000253193 OR51G2Q8NGK0 314 aa17.37■□□□□ 0.37
LRP3-201ENST00000253193 BBS10Q8TAM1 723 aa17.37■□□□□ 0.37
LRP3-201ENST00000253193 SUN3Q8TAQ9 357 aa17.37■□□□□ 0.37
LRP3-201ENST00000253193 SECISBP2Q96T21 854 aaKnown RBP17.37■□□□□ 0.37
LRP3-201ENST00000253193 CXXC1Q9P0U4 656 aaPredicted RBP17.37■□□□□ 0.37
LRP3-201ENST00000253193 NFKBIL1Q9UBC1 381 aaPredicted RBP17.37■□□□□ 0.37
LRP3-201ENST00000253193 FRMPD3Q5JV73 1810 aa17.37■□□□□ 0.37
LRP3-201ENST00000253193 TBC1D3DA0A087WVF3 549 aa17.37■□□□□ 0.37
LRP3-201ENST00000253193 TBC1D3IA0A087WXS9 549 aa17.37■□□□□ 0.37
LRP3-201ENST00000253193 TBC1D3EA0A087X179 549 aa17.37■□□□□ 0.37
LRP3-201ENST00000253193 TBC1D3KA0A087X1G2 549 aa17.37■□□□□ 0.37
LRP3-201ENST00000253193 TBC1D3FA6NER0 549 aaPredicted RBP17.37■□□□□ 0.37
LRP3-201ENST00000253193 TBC1D3LB9A6J9 549 aa17.37■□□□□ 0.37
LRP3-201ENST00000253193 RFXAPO00287 272 aa17.37■□□□□ 0.37
LRP3-201ENST00000253193 KIAA0355O15063 1070 aa17.37■□□□□ 0.37
LRP3-201ENST00000253193 ARHGEF9O43307 516 aa17.37■□□□□ 0.37
LRP3-201ENST00000253193 ASGR2P07307 311 aa17.37■□□□□ 0.37
LRP3-201ENST00000253193 TBC1D3HP0C7X1 549 aa17.37■□□□□ 0.37
LRP3-201ENST00000253193 IL12RB1P42701 662 aa17.37■□□□□ 0.37
LRP3-201ENST00000253193 SLC9A3P48764 834 aa17.37■□□□□ 0.37
LRP3-201ENST00000253193 VEGFBP49765 207 aa17.37■□□□□ 0.37
LRP3-201ENST00000253193 RNASE12Q5GAN4 147 aaKnown RBP17.37■□□□□ 0.37
LRP3-201ENST00000253193 TBC1D3GQ6DHY5 549 aa17.37■□□□□ 0.37
LRP3-201ENST00000253193 TBC1D3CQ6IPX1 549 aa17.37■□□□□ 0.37
LRP3-201ENST00000253193 GDPGP1Q6ZNW5 385 aa17.37■□□□□ 0.37
LRP3-201ENST00000253193 TBC1D3Q8IZP1 549 aaPredicted RBP17.37■□□□□ 0.37
LRP3-201ENST00000253193 OR52P1PQ8NH57 321 aa17.37■□□□□ 0.37
LRP3-201ENST00000253193 OR10G6Q8NH81 332 aa17.37■□□□□ 0.37
LRP3-201ENST00000253193 MCHR1Q99705 422 aa17.37■□□□□ 0.37
LRP3-201ENST00000253193 TMEM246Q9BRR3 403 aa17.37■□□□□ 0.37
LRP3-201ENST00000253193 OR51V1Q9H2C8 321 aa17.37■□□□□ 0.37
LRP3-201ENST00000253193 PCM1Q15154 2024 aa17.37■□□□□ 0.37
LRP3-201ENST00000253193 A8MVJ9 347 aa17.37■□□□□ 0.37
LRP3-201ENST00000253193 PLOD3O60568 738 aa17.37■□□□□ 0.37
LRP3-201ENST00000253193 MYL9P24844 172 aa17.37■□□□□ 0.37
LRP3-201ENST00000253193 NOS3P29474 1203 aa17.37■□□□□ 0.37
LRP3-201ENST00000253193 CSNK1G2P78368 415 aa17.37■□□□□ 0.37
LRP3-201ENST00000253193 ST3GAL3Q11203 375 aa17.37■□□□□ 0.37
LRP3-201ENST00000253193 FYTTD1Q96QD9 318 aaKnown RBP17.37■□□□□ 0.37
LRP3-201ENST00000253193 OR2A14Q96R47 310 aa17.37■□□□□ 0.37
LRP3-201ENST00000253193 PLA2G12AQ9BZM1 189 aa17.37■□□□□ 0.37
LRP3-201ENST00000253193 ADAP2Q9NPF8 381 aa17.37■□□□□ 0.37
LRP3-201ENST00000253193 PAK6Q9NQU5 681 aaPredicted RBP17.37■□□□□ 0.37
LRP3-201ENST00000253193 ICKQ9UPZ9 632 aa17.37■□□□□ 0.37
LRP3-201ENST00000253193 NTNG1Q9Y2I2 539 aa17.37■□□□□ 0.37
LRP3-201ENST00000253193 TSPAN11A1L157 253 aa17.36■□□□□ 0.37
LRP3-201ENST00000253193 HYKKA2RU49 373 aa17.36■□□□□ 0.37
LRP3-201ENST00000253193 LILRB5O75023 590 aa17.36■□□□□ 0.37
LRP3-201ENST00000253193 HOXB3P14651 431 aaPredicted RBP17.36■□□□□ 0.37
LRP3-201ENST00000253193 TEKQ02763 1124 aa17.36■□□□□ 0.37
LRP3-201ENST00000253193 NDUFA5Q16718 116 aa17.36■□□□□ 0.37
LRP3-201ENST00000253193 NRMQ8IXM6 262 aa17.36■□□□□ 0.37
LRP3-201ENST00000253193 UBQLNLQ8IYU4 475 aa17.36■□□□□ 0.37
LRP3-201ENST00000253193 TMIEQ8NEW7 156 aa17.36■□□□□ 0.37
LRP3-201ENST00000253193 A4GNTQ9UNA3 340 aa17.36■□□□□ 0.37
LRP3-201ENST00000253193 B4GALT2O60909 372 aa17.36■□□□□ 0.37
LRP3-201ENST00000253193 CHRM4P08173 479 aa17.36■□□□□ 0.37
LRP3-201ENST00000253193 CRYBB2P43320 205 aa17.36■□□□□ 0.37
LRP3-201ENST00000253193 RAB28P51157 221 aa17.36■□□□□ 0.37
LRP3-201ENST00000253193 DBPQ10586 325 aaPredicted RBP17.36■□□□□ 0.37
LRP3-201ENST00000253193 MRPL28Q13084 256 aaKnown RBP17.36■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms