RNA–Protein interactions for RNA: ENST00000249923.7

COPB1-201, Transcript of coatomer protein complex subunit beta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPB1, Length 3,481 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-201ENST00000249923 NUPL2O15504 423 aaKnown RBP9.52□□□□□ -0.88
COPB1-201ENST00000249923 NDUFS4O43181 175 aa9.52□□□□□ -0.88
COPB1-201ENST00000249923 FRS3O43559 492 aa9.52□□□□□ -0.88
COPB1-201ENST00000249923 VEGFDO43915 354 aa9.52□□□□□ -0.88
COPB1-201ENST00000249923 KELP23276 732 aa9.52□□□□□ -0.88
COPB1-201ENST00000249923 CSTF2P33240 577 aaKnown RBP eCLIP9.52□□□□□ -0.88
COPB1-201ENST00000249923 PRKAG1P54619 331 aa9.52□□□□□ -0.88
COPB1-201ENST00000249923 QPRTQ15274 297 aa9.52□□□□□ -0.88
COPB1-201ENST00000249923 NDUFAF5Q5TEU4 345 aa9.52□□□□□ -0.88
COPB1-201ENST00000249923 ZNF557Q8N988 423 aaPredicted RBP9.52□□□□□ -0.88
COPB1-201ENST00000249923 OR6C4Q8NGE1 309 aa9.52□□□□□ -0.88
COPB1-201ENST00000249923 OR52I1Q8NGK6 324 aa9.52□□□□□ -0.88
COPB1-201ENST00000249923 CNRIP1Q96F85 164 aaPredicted RBP9.52□□□□□ -0.88
COPB1-201ENST00000249923 C16orf58Q96GQ5 468 aa9.52□□□□□ -0.88
COPB1-201ENST00000249923 PAWRQ96IZ0 340 aaKnown RBP9.52□□□□□ -0.88
COPB1-201ENST00000249923 POLR2J3Q9H1A7 115 aaKnown RBP9.52□□□□□ -0.88
COPB1-201ENST00000249923 DDX31Q9H8H2 851 aaKnown RBP9.52□□□□□ -0.88
COPB1-201ENST00000249923 SMURF1Q9HCE7 757 aa9.52□□□□□ -0.88
COPB1-201ENST00000249923 PEX16Q9Y5Y5 336 aa9.52□□□□□ -0.88
COPB1-201ENST00000249923 ALPK2Q86TB3 2170 aa9.52□□□□□ -0.88
COPB1-201ENST00000249923 A8MUA0 341 aa9.52□□□□□ -0.89
COPB1-201ENST00000249923 C5orf58C9J3I9 102 aa9.52□□□□□ -0.89
COPB1-201ENST00000249923 FAAHO00519 579 aa9.52□□□□□ -0.89
COPB1-201ENST00000249923 MYL12BO14950 172 aa9.52□□□□□ -0.89
COPB1-201ENST00000249923 TLX2O43763 284 aaPredicted RBP9.52□□□□□ -0.89
COPB1-201ENST00000249923 SLITRK5O94991 958 aa9.52□□□□□ -0.89
COPB1-201ENST00000249923 FCER2P06734 321 aa9.52□□□□□ -0.89
COPB1-201ENST00000249923 IL18Q14116 193 aa9.52□□□□□ -0.89
COPB1-201ENST00000249923 ZNF267Q14586 743 aaPredicted RBP9.52□□□□□ -0.89
COPB1-201ENST00000249923 BTBD16Q32M84 506 aa9.52□□□□□ -0.89
COPB1-201ENST00000249923 OR2G6Q5TZ20 316 aa9.52□□□□□ -0.89
COPB1-201ENST00000249923 KRT78Q8N1N4 520 aa9.52□□□□□ -0.89
COPB1-201ENST00000249923 UXS1Q8NBZ7 420 aa9.52□□□□□ -0.89
COPB1-201ENST00000249923 SIMC1Q8NDZ2 872 aa9.52□□□□□ -0.89
COPB1-201ENST00000249923 OR2A1Q8NGT9 310 aa9.52□□□□□ -0.89
COPB1-201ENST00000249923 C6orf106Q9H6K1 298 aaPredicted RBP9.52□□□□□ -0.89
COPB1-201ENST00000249923 TRIM45Q9H8W5 580 aaPredicted RBP9.52□□□□□ -0.89
COPB1-201ENST00000249923 TBC1D17Q9HA65 648 aa9.52□□□□□ -0.89
COPB1-201ENST00000249923 NEUROD4Q9HD90 331 aa9.52□□□□□ -0.89
COPB1-201ENST00000249923 FBXW2Q9UKT8 454 aa9.52□□□□□ -0.89
COPB1-201ENST00000249923 CFL2Q9Y281 166 aa9.52□□□□□ -0.89
COPB1-201ENST00000249923 GPR52Q9Y2T5 361 aa9.52□□□□□ -0.89
COPB1-201ENST00000249923 A0A075B6Q4 140 aa9.52□□□□□ -0.89
COPB1-201ENST00000249923 A0A1W2PRQ8 180 aa9.52□□□□□ -0.89
COPB1-201ENST00000249923 LRIT2A6NDA9 550 aa9.52□□□□□ -0.89
COPB1-201ENST00000249923 OR1F1O43749 312 aa9.52□□□□□ -0.89
COPB1-201ENST00000249923 SLC28A2O43868 658 aa9.52□□□□□ -0.89
COPB1-201ENST00000249923 PDE9AO76083 593 aa9.52□□□□□ -0.89
COPB1-201ENST00000249923 LALBAP00709 142 aa9.52□□□□□ -0.89
COPB1-201ENST00000249923 THY1P04216 161 aa9.52□□□□□ -0.89
COPB1-201ENST00000249923 EPHX1P07099 455 aa9.52□□□□□ -0.89
COPB1-201ENST00000249923 BCL6P41182 706 aa9.52□□□□□ -0.89
COPB1-201ENST00000249923 FZD5Q13467 585 aa9.52□□□□□ -0.89
COPB1-201ENST00000249923 FAM78AQ5JUQ0 283 aa9.52□□□□□ -0.89
COPB1-201ENST00000249923 B3GLCTQ6Y288 498 aa9.52□□□□□ -0.89
COPB1-201ENST00000249923 ABI3BPQ7Z7G0 1075 aa9.52□□□□□ -0.89
COPB1-201ENST00000249923 IQCHQ86VS3 1027 aa9.52□□□□□ -0.89
COPB1-201ENST00000249923 XAGE5Q8WWM1 108 aa9.52□□□□□ -0.89
COPB1-201ENST00000249923 TMEM80Q96HE8 168 aa9.52□□□□□ -0.89
COPB1-201ENST00000249923 ZNF514Q96K75 400 aaPredicted RBP9.52□□□□□ -0.89
COPB1-201ENST00000249923 ZNF582Q96NG8 517 aaPredicted RBP9.52□□□□□ -0.89
COPB1-201ENST00000249923 PELI2Q9HAT8 420 aa9.52□□□□□ -0.89
COPB1-201ENST00000249923 TVP23BQ9NYZ1 205 aa9.52□□□□□ -0.89
COPB1-201ENST00000249923 STMN3Q9NZ72 180 aa9.52□□□□□ -0.89
COPB1-201ENST00000249923 NLKQ9UBE8 527 aa9.52□□□□□ -0.89
COPB1-201ENST00000249923 SEC14L3Q9UDX4 400 aa9.52□□□□□ -0.89
COPB1-201ENST00000249923 PLEKHB1Q9UF11 243 aaPredicted RBP9.52□□□□□ -0.89
COPB1-201ENST00000249923 SATB2Q9UPW6 733 aa9.52□□□□□ -0.89
COPB1-201ENST00000249923 MGAT4BQ9UQ53 548 aa9.52□□□□□ -0.89
COPB1-201ENST00000249923 NTNG1Q9Y2I2 539 aa9.52□□□□□ -0.89
COPB1-201ENST00000249923 SCN3AQ9NY46 2000 aa9.52□□□□□ -0.89
COPB1-201ENST00000249923 EDDM13A0A1B0GTR0 161 aa9.51□□□□□ -0.89
COPB1-201ENST00000249923 A0A1W2PQ09 198 aa9.51□□□□□ -0.89
COPB1-201ENST00000249923 HYKKA2RU49 373 aa9.51□□□□□ -0.89
COPB1-201ENST00000249923 ZNF670-ZNF695F2Z2N8 137 aa9.51□□□□□ -0.89
COPB1-201ENST00000249923 I3L521 148 aa9.51□□□□□ -0.89
COPB1-201ENST00000249923 MAN2B1O00754 1011 aa9.51□□□□□ -0.89
COPB1-201ENST00000249923 MPZL2O60487 215 aa9.51□□□□□ -0.89
COPB1-201ENST00000249923 RB1P06400 928 aa9.51□□□□□ -0.89
COPB1-201ENST00000249923 PEBP1P30086 187 aaKnown RBP9.51□□□□□ -0.89
COPB1-201ENST00000249923 CLCNKAP51800 687 aa9.51□□□□□ -0.89
COPB1-201ENST00000249923 ST8SIA6P61647 398 aa9.51□□□□□ -0.89
COPB1-201ENST00000249923 CDK5Q00535 292 aa9.51□□□□□ -0.89
COPB1-201ENST00000249923 MAP4K2Q12851 820 aa9.51□□□□□ -0.89
COPB1-201ENST00000249923 HEPACAMQ14CZ8 416 aa9.51□□□□□ -0.89
COPB1-201ENST00000249923 AGAP6Q5VW22 663 aa9.51□□□□□ -0.89
COPB1-201ENST00000249923 KIAA1161Q6NSJ0 714 aa9.51□□□□□ -0.89
COPB1-201ENST00000249923 ADAMTSL4Q6UY14 1074 aa9.51□□□□□ -0.89
COPB1-201ENST00000249923 FBXL6Q8N531 539 aa9.51□□□□□ -0.89
COPB1-201ENST00000249923 ZNF485Q8NCK3 441 aa9.51□□□□□ -0.89
COPB1-201ENST00000249923 OR4K5Q8NGD3 323 aa9.51□□□□□ -0.89
COPB1-201ENST00000249923 OR5H6Q8NGV6 325 aa9.51□□□□□ -0.89
COPB1-201ENST00000249923 CHAC2Q8WUX2 184 aa9.51□□□□□ -0.89
COPB1-201ENST00000249923 KLHL6Q8WZ60 621 aa9.51□□□□□ -0.89
COPB1-201ENST00000249923 OR8D1Q8WZ84 308 aa9.51□□□□□ -0.89
COPB1-201ENST00000249923 UBE2E3Q969T4 207 aa9.51□□□□□ -0.89
COPB1-201ENST00000249923 ARMC5Q96C12 935 aa9.51□□□□□ -0.89
COPB1-201ENST00000249923 AGAP4Q96P64 663 aa9.51□□□□□ -0.89
COPB1-201ENST00000249923 INSM2Q96T92 566 aaPredicted RBP9.51□□□□□ -0.89
COPB1-201ENST00000249923 WACQ9BTA9 647 aa9.51□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms