RNA–Protein interactions for RNA: ENST00000249116.6

APOBEC3A-201, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene APOBEC3A, Length 1,444 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3A-201ENST00000249116 GNB5O14775 395 aa11.79□□□□□ -0.52
APOBEC3A-201ENST00000249116 SPAG7O75391 227 aa11.79□□□□□ -0.52
APOBEC3A-201ENST00000249116 ERAL1O75616 437 aaKnown RBP11.79□□□□□ -0.52
APOBEC3A-201ENST00000249116 PPM1BO75688 479 aa11.79□□□□□ -0.52
APOBEC3A-201ENST00000249116 ABCB1P08183 1280 aaPredicted RBP11.79□□□□□ -0.52
APOBEC3A-201ENST00000249116 CREB1P16220 341 aa11.79□□□□□ -0.52
APOBEC3A-201ENST00000249116 BMP7P18075 431 aa11.79□□□□□ -0.52
APOBEC3A-201ENST00000249116 IMPDH1P20839 514 aa11.79□□□□□ -0.52
APOBEC3A-201ENST00000249116 DNASE1P24855 282 aa11.79□□□□□ -0.52
APOBEC3A-201ENST00000249116 ABCD3P28288 659 aa11.79□□□□□ -0.52
APOBEC3A-201ENST00000249116 CDH13P55290 713 aa11.79□□□□□ -0.52
APOBEC3A-201ENST00000249116 PPP2R2AP63151 447 aa11.79□□□□□ -0.52
APOBEC3A-201ENST00000249116 RCAN2Q14206 197 aa11.79□□□□□ -0.52
APOBEC3A-201ENST00000249116 CASP8Q14790 479 aa11.79□□□□□ -0.52
APOBEC3A-201ENST00000249116 UNC50Q53HI1 259 aa11.79□□□□□ -0.52
APOBEC3A-201ENST00000249116 SGO1Q5FBB7 561 aa11.79□□□□□ -0.52
APOBEC3A-201ENST00000249116 TNFAIP8L3Q5GJ75 292 aa11.79□□□□□ -0.52
APOBEC3A-201ENST00000249116 WIPI1Q5MNZ9 446 aaPredicted RBP11.79□□□□□ -0.52
APOBEC3A-201ENST00000249116 FNDC7Q5VTL7 733 aa11.79□□□□□ -0.52
APOBEC3A-201ENST00000249116 FBXW10Q5XX13 1052 aa11.79□□□□□ -0.52
APOBEC3A-201ENST00000249116 TIGD3Q6B0B8 471 aa11.79□□□□□ -0.52
APOBEC3A-201ENST00000249116 SLC30A6Q6NXT4 461 aa11.79□□□□□ -0.52
APOBEC3A-201ENST00000249116 SLC48A1Q6P1K1 146 aa11.79□□□□□ -0.52
APOBEC3A-201ENST00000249116 TMEM81Q6P7N7 255 aa11.79□□□□□ -0.52
APOBEC3A-201ENST00000249116 NUP54Q7Z3B4 507 aa11.79□□□□□ -0.52
APOBEC3A-201ENST00000249116 COMMD6Q7Z4G1 85 aa11.79□□□□□ -0.52
APOBEC3A-201ENST00000249116 OR4F6Q8NGB9 312 aa11.79□□□□□ -0.52
APOBEC3A-201ENST00000249116 ABTB1Q969K4 478 aaPredicted RBP11.79□□□□□ -0.52
APOBEC3A-201ENST00000249116 ZDHHC16Q969W1 377 aa11.79□□□□□ -0.52
APOBEC3A-201ENST00000249116 CCDC126Q96EE4 140 aa11.79□□□□□ -0.52
APOBEC3A-201ENST00000249116 UGT2B28Q9BY64 529 aa11.79□□□□□ -0.52
APOBEC3A-201ENST00000249116 NXF5Q9H1B4 397 aaKnown RBP11.79□□□□□ -0.52
APOBEC3A-201ENST00000249116 CXXC4Q9H2H0 198 aa11.79□□□□□ -0.52
APOBEC3A-201ENST00000249116 CENPHQ9H3R5 247 aa11.79□□□□□ -0.52
APOBEC3A-201ENST00000249116 NMRK1Q9NWW6 199 aa11.79□□□□□ -0.52
APOBEC3A-201ENST00000249116 MID2Q9UJV3 735 aa11.79□□□□□ -0.52
APOBEC3A-201ENST00000249116 INTS1Q8N201 2190 aaKnown RBP11.79□□□□□ -0.52
APOBEC3A-201ENST00000249116 ANKRD17O75179 2603 aaKnown RBP11.79□□□□□ -0.52
APOBEC3A-201ENST00000249116 TACC2O95359 2948 aa11.79□□□□□ -0.52
APOBEC3A-201ENST00000249116 MBD3L4A6NDZ8 208 aaPredicted RBP11.78□□□□□ -0.52
APOBEC3A-201ENST00000249116 MBD3L3A6NE82 208 aaPredicted RBP11.78□□□□□ -0.52
APOBEC3A-201ENST00000249116 MBD3L5A6NJ08 208 aaPredicted RBP11.78□□□□□ -0.52
APOBEC3A-201ENST00000249116 ACOX3O15254 700 aa11.78□□□□□ -0.52
APOBEC3A-201ENST00000249116 TYROBPO43914 113 aa11.78□□□□□ -0.52
APOBEC3A-201ENST00000249116 SUPT7LO94864 414 aa11.78□□□□□ -0.52
APOBEC3A-201ENST00000249116 ACTL6AO96019 429 aa11.78□□□□□ -0.52
APOBEC3A-201ENST00000249116 OTCP00480 354 aa11.78□□□□□ -0.52
APOBEC3A-201ENST00000249116 ATP1B1P05026 303 aa11.78□□□□□ -0.52
APOBEC3A-201ENST00000249116 H2AFXP16104 143 aaPredicted RBP11.78□□□□□ -0.52
APOBEC3A-201ENST00000249116 TSPAN8P19075 237 aa11.78□□□□□ -0.52
APOBEC3A-201ENST00000249116 CSNK2A2P19784 350 aaPredicted RBP11.78□□□□□ -0.52
APOBEC3A-201ENST00000249116 S1PR1P21453 382 aa11.78□□□□□ -0.52
APOBEC3A-201ENST00000249116 TACR1P25103 407 aa11.78□□□□□ -0.52
APOBEC3A-201ENST00000249116 CTSSP25774 331 aa11.78□□□□□ -0.52
APOBEC3A-201ENST00000249116 PTPN6P29350 595 aa11.78□□□□□ -0.52
APOBEC3A-201ENST00000249116 OPRM1P35372 400 aa11.78□□□□□ -0.52
APOBEC3A-201ENST00000249116 ZNF136P52737 540 aa11.78□□□□□ -0.52
APOBEC3A-201ENST00000249116 WNT3P56703 355 aa11.78□□□□□ -0.52
APOBEC3A-201ENST00000249116 DCAF7P61962 342 aa11.78□□□□□ -0.52
APOBEC3A-201ENST00000249116 CLCQ05315 142 aa11.78□□□□□ -0.52
APOBEC3A-201ENST00000249116 MAP4K2Q12851 820 aa11.78□□□□□ -0.52
APOBEC3A-201ENST00000249116 PCLAFQ15004 111 aa11.78□□□□□ -0.52
APOBEC3A-201ENST00000249116 PRICKLE4Q2TBC4 344 aa11.78□□□□□ -0.52
APOBEC3A-201ENST00000249116 EIPR1Q53HC9 387 aa11.78□□□□□ -0.52
APOBEC3A-201ENST00000249116 ANGPTL8Q6UXH0 198 aa11.78□□□□□ -0.52
APOBEC3A-201ENST00000249116 MBD3L2Q8NHZ7 208 aaPredicted RBP11.78□□□□□ -0.52
APOBEC3A-201ENST00000249116 TCP10LQ8TDR4 215 aa11.78□□□□□ -0.52
APOBEC3A-201ENST00000249116 SELENOMQ8WWX9 145 aa11.78□□□□□ -0.52
APOBEC3A-201ENST00000249116 PGM2Q96G03 612 aa11.78□□□□□ -0.52
APOBEC3A-201ENST00000249116 WDYHV1Q96HA8 205 aa11.78□□□□□ -0.52
APOBEC3A-201ENST00000249116 LCORQ96JN0 433 aaPredicted RBP11.78□□□□□ -0.52
APOBEC3A-201ENST00000249116 FAM111AQ96PZ2 611 aa11.78□□□□□ -0.52
APOBEC3A-201ENST00000249116 TMUB1Q9BVT8 246 aa11.78□□□□□ -0.52
APOBEC3A-201ENST00000249116 FAIM2Q9BWQ8 316 aa11.78□□□□□ -0.52
APOBEC3A-201ENST00000249116 OSBPL11Q9BXB4 747 aa11.78□□□□□ -0.52
APOBEC3A-201ENST00000249116 CALHM2Q9HA72 323 aa11.78□□□□□ -0.52
APOBEC3A-201ENST00000249116 BRF2Q9HAW0 419 aa11.78□□□□□ -0.52
APOBEC3A-201ENST00000249116 ARGLU1Q9NWB6 273 aaPredicted RBP11.78□□□□□ -0.52
APOBEC3A-201ENST00000249116 SLC17A7Q9P2U7 560 aa11.78□□□□□ -0.52
APOBEC3A-201ENST00000249116 PRODH2Q9UF12 536 aa11.78□□□□□ -0.52
APOBEC3A-201ENST00000249116 CES1P1Q9UKY3 287 aa11.78□□□□□ -0.52
APOBEC3A-201ENST00000249116 SNX6Q9UNH7 406 aa11.78□□□□□ -0.52
APOBEC3A-201ENST00000249116 HIVEP1P15822 2718 aa11.78□□□□□ -0.52
APOBEC3A-201ENST00000249116 A0A1B0GTL3 188 aa11.77□□□□□ -0.52
APOBEC3A-201ENST00000249116 TUBAL3A6NHL2 446 aa11.77□□□□□ -0.52
APOBEC3A-201ENST00000249116 KDM4EB2RXH2 506 aaPredicted RBP11.77□□□□□ -0.52
APOBEC3A-201ENST00000249116 PPP6CO00743 305 aa11.77□□□□□ -0.52
APOBEC3A-201ENST00000249116 MYZAPP0CAP1 466 aa11.77□□□□□ -0.52
APOBEC3A-201ENST00000249116 CPA3P15088 417 aa11.77□□□□□ -0.52
APOBEC3A-201ENST00000249116 FEN1P39748 380 aaKnown RBP11.77□□□□□ -0.52
APOBEC3A-201ENST00000249116 DNAJB13P59910 316 aa11.77□□□□□ -0.52
APOBEC3A-201ENST00000249116 TRA2BP62995 288 aaKnown RBP11.77□□□□□ -0.52
APOBEC3A-201ENST00000249116 PLCXD2Q0VAA5 305 aa11.77□□□□□ -0.52
APOBEC3A-201ENST00000249116 SNTA1Q13424 505 aa11.77□□□□□ -0.52
APOBEC3A-201ENST00000249116 EXOSC7Q15024 291 aaKnown RBP11.77□□□□□ -0.52
APOBEC3A-201ENST00000249116 DAZAP2Q15038 168 aaPredicted RBP11.77□□□□□ -0.52
APOBEC3A-201ENST00000249116 CEBPEQ15744 281 aa11.77□□□□□ -0.52
APOBEC3A-201ENST00000249116 NNATQ16517 81 aa11.77□□□□□ -0.52
APOBEC3A-201ENST00000249116 LIPMQ5VYY2 423 aa11.77□□□□□ -0.52
APOBEC3A-201ENST00000249116 LETMD1Q6P1Q0 360 aa11.77□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms