RNA–Protein interactions for RNA: ENST00000239243.6

MSX2-201, Transcript of msh homeobox 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSX2, Length 2,241 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSX2-201ENST00000239243 DNAJC22Q8N4W6 341 aa21.78■■□□□ 1.08
MSX2-201ENST00000239243 OR6T1Q8NGN1 323 aa21.78■■□□□ 1.08
MSX2-201ENST00000239243 RHOXF1Q8NHV9 184 aa21.78■■□□□ 1.08
MSX2-201ENST00000239243 ZNF675Q8TD23 568 aa21.78■■□□□ 1.08
MSX2-201ENST00000239243 SLC9A6Q92581 669 aa21.78■■□□□ 1.08
MSX2-201ENST00000239243 UCK2Q9BZX2 261 aa21.78■■□□□ 1.08
MSX2-201ENST00000239243 STARD5Q9NSY2 213 aa21.78■■□□□ 1.08
MSX2-201ENST00000239243 PLCXD1Q9NUJ7 323 aa21.78■■□□□ 1.08
MSX2-201ENST00000239243 IFT52Q9Y366 437 aa21.78■■□□□ 1.08
MSX2-201ENST00000239243 TMEM131Q92545 1883 aa21.78■■□□□ 1.08
MSX2-201ENST00000239243 NINQ8N4C6 2090 aa21.78■■□□□ 1.08
MSX2-201ENST00000239243 SGK494L7N484 410 aa21.78■■□□□ 1.08
MSX2-201ENST00000239243 MPZL2O60487 215 aa21.78■■□□□ 1.08
MSX2-201ENST00000239243 NT5EP21589 574 aa21.78■■□□□ 1.08
MSX2-201ENST00000239243 FUT4P22083 530 aa21.78■■□□□ 1.08
MSX2-201ENST00000239243 CRISP1P54107 249 aa21.78■■□□□ 1.08
MSX2-201ENST00000239243 PIGFQ07326 219 aa21.78■■□□□ 1.08
MSX2-201ENST00000239243 PIN1Q13526 163 aaPredicted RBP21.78■■□□□ 1.08
MSX2-201ENST00000239243 PRTGQ2VWP7 1150 aa21.78■■□□□ 1.08
MSX2-201ENST00000239243 ARHGAP11BQ3KRB8 267 aa21.78■■□□□ 1.08
MSX2-201ENST00000239243 LAIR1Q6GTX8 287 aa21.78■■□□□ 1.08
MSX2-201ENST00000239243 DHRS4L2Q6PKH6 230 aa21.78■■□□□ 1.08
MSX2-201ENST00000239243 COMTD1Q86VU5 262 aa21.78■■□□□ 1.08
MSX2-201ENST00000239243 ARHGEF39Q8N4T4 335 aa21.78■■□□□ 1.08
MSX2-201ENST00000239243 WFDC6Q9BQY6 131 aa21.78■■□□□ 1.08
MSX2-201ENST00000239243 FUZQ9BT04 418 aa21.78■■□□□ 1.08
MSX2-201ENST00000239243 DGCR6LQ9BY27 220 aa21.78■■□□□ 1.08
MSX2-201ENST00000239243 MTHFD2LQ9H903 347 aaPredicted RBP21.78■■□□□ 1.08
MSX2-201ENST00000239243 AASSQ9UDR5 926 aa21.78■■□□□ 1.08
MSX2-201ENST00000239243 SH3PXD2BA1X283 911 aa21.77■■□□□ 1.08
MSX2-201ENST00000239243 STK25O00506 426 aa21.77■■□□□ 1.08
MSX2-201ENST00000239243 EPPINO95925 133 aa21.77■■□□□ 1.08
MSX2-201ENST00000239243 IFNA8P32881 189 aa21.77■■□□□ 1.08
MSX2-201ENST00000239243 PTGES3Q15185 160 aaKnown RBP21.77■■□□□ 1.08
MSX2-201ENST00000239243 FHL5Q5TD97 284 aa21.77■■□□□ 1.08
MSX2-201ENST00000239243 PRSS48Q7RTY5 328 aa21.77■■□□□ 1.08
MSX2-201ENST00000239243 CDS1Q92903 461 aa21.77■■□□□ 1.08
MSX2-201ENST00000239243 MAP3K3Q99759 626 aa21.77■■□□□ 1.08
MSX2-201ENST00000239243 ARHGDIGQ99819 225 aa21.77■■□□□ 1.08
MSX2-201ENST00000239243 PIGUQ9H490 435 aa21.77■■□□□ 1.08
MSX2-201ENST00000239243 ERVK-18Q9QC07 812 aa21.77■■□□□ 1.08
MSX2-201ENST00000239243 BLACEA4D250 179 aa21.76■■□□□ 1.07
MSX2-201ENST00000239243 HCRTR1O43613 425 aa21.76■■□□□ 1.07
MSX2-201ENST00000239243 OSMP13725 252 aa21.76■■□□□ 1.07
MSX2-201ENST00000239243 GSSP48637 474 aa21.76■■□□□ 1.07
MSX2-201ENST00000239243 ID2Q02363 134 aa21.76■■□□□ 1.07
MSX2-201ENST00000239243 EMX1Q04741 257 aaPredicted RBP21.76■■□□□ 1.07
MSX2-201ENST00000239243 SEC23BQ15437 767 aa21.76■■□□□ 1.07
MSX2-201ENST00000239243 SMN1Q16637 294 aaKnown RBP21.76■■□□□ 1.07
MSX2-201ENST00000239243 CWF19L1Q69YN2 538 aaKnown RBP21.76■■□□□ 1.07
MSX2-201ENST00000239243 OGFOD3Q6PK18 319 aa21.76■■□□□ 1.07
MSX2-201ENST00000239243 CDRT4Q8N9R6 151 aa21.76■■□□□ 1.07
MSX2-201ENST00000239243 TMEM52Q8NDY8 209 aa21.76■■□□□ 1.07
MSX2-201ENST00000239243 C1orf216Q8TAB5 229 aa21.76■■□□□ 1.07
MSX2-201ENST00000239243 SLC7A13Q8TCU3 470 aa21.76■■□□□ 1.07
MSX2-201ENST00000239243 RAB2BQ8WUD1 216 aa21.76■■□□□ 1.07
MSX2-201ENST00000239243 UBE2FQ969M7 185 aa21.76■■□□□ 1.07
MSX2-201ENST00000239243 FKBP10Q96AY3 582 aa21.76■■□□□ 1.07
MSX2-201ENST00000239243 QRSL1Q9H0R6 528 aaKnown RBP21.76■■□□□ 1.07
MSX2-201ENST00000239243 SLC24A3Q9HC58 644 aa21.76■■□□□ 1.07
MSX2-201ENST00000239243 ZAR1LA6NP61 321 aa21.76■■□□□ 1.07
MSX2-201ENST00000239243 ZNF99A8MXY4 864 aaPredicted RBP21.76■■□□□ 1.07
MSX2-201ENST00000239243 H3BMQ9 156 aa21.76■■□□□ 1.07
MSX2-201ENST00000239243 RDH16O75452 317 aa21.76■■□□□ 1.07
MSX2-201ENST00000239243 PDX1P52945 283 aa21.76■■□□□ 1.07
MSX2-201ENST00000239243 FOXD4Q12950 439 aaPredicted RBP21.76■■□□□ 1.07
MSX2-201ENST00000239243 TRMT12Q53H54 448 aaKnown RBP21.76■■□□□ 1.07
MSX2-201ENST00000239243 OR9A4Q8NGU2 314 aa21.76■■□□□ 1.07
MSX2-201ENST00000239243 OR52P1PQ8NH57 321 aa21.76■■□□□ 1.07
MSX2-201ENST00000239243 ADAMTS18Q8TE60 1221 aa21.76■■□□□ 1.07
MSX2-201ENST00000239243 RORBQ92753 470 aa21.76■■□□□ 1.07
MSX2-201ENST00000239243 COG8Q96MW5 612 aa21.76■■□□□ 1.07
MSX2-201ENST00000239243 FTSJ1Q9UET6 329 aa21.76■■□□□ 1.07
MSX2-201ENST00000239243 ZNF232Q9UNY5 417 aa21.76■■□□□ 1.07
MSX2-201ENST00000239243 WDR45Q9Y484 360 aa21.76■■□□□ 1.07
MSX2-201ENST00000239243 PCDHGA10Q9Y5H3 936 aa21.76■■□□□ 1.07
MSX2-201ENST00000239243 ALOX5P09917 674 aa21.75■■□□□ 1.07
MSX2-201ENST00000239243 CHMP24386 653 aa21.75■■□□□ 1.07
MSX2-201ENST00000239243 CTSKP43235 329 aa21.75■■□□□ 1.07
MSX2-201ENST00000239243 EPHA4P54764 986 aa21.75■■□□□ 1.07
MSX2-201ENST00000239243 ILKQ13418 452 aa21.75■■□□□ 1.07
MSX2-201ENST00000239243 PRICKLE4Q2TBC4 344 aa21.75■■□□□ 1.07
MSX2-201ENST00000239243 C14orf28Q4W4Y0 310 aa21.75■■□□□ 1.07
MSX2-201ENST00000239243 FRRS1Q6ZNA5 592 aa21.75■■□□□ 1.07
MSX2-201ENST00000239243 PEX5LQ8IYB4 626 aa21.75■■□□□ 1.07
MSX2-201ENST00000239243 STACQ99469 402 aa21.75■■□□□ 1.07
MSX2-201ENST00000239243 ADAP2Q9NPF8 381 aa21.75■■□□□ 1.07
MSX2-201ENST00000239243 DUSP22Q9NRW4 184 aa21.75■■□□□ 1.07
MSX2-201ENST00000239243 SATB2Q9UPW6 733 aa21.75■■□□□ 1.07
MSX2-201ENST00000239243 MRPS33Q9Y291 106 aaKnown RBP21.75■■□□□ 1.07
MSX2-201ENST00000239243 FAM227AF5H4B4 570 aa21.75■■□□□ 1.07
MSX2-201ENST00000239243 CHST10O43529 356 aa21.75■■□□□ 1.07
MSX2-201ENST00000239243 NME6O75414 186 aaPredicted RBP21.75■■□□□ 1.07
MSX2-201ENST00000239243 SLC35E2P0CK97 266 aa21.75■■□□□ 1.07
MSX2-201ENST00000239243 CXCL12P48061 93 aa21.75■■□□□ 1.07
MSX2-201ENST00000239243 PPM1FP49593 454 aaPredicted RBP21.75■■□□□ 1.07
MSX2-201ENST00000239243 C21orf59P57076 290 aa21.75■■□□□ 1.07
MSX2-201ENST00000239243 COX10Q12887 443 aa21.75■■□□□ 1.07
MSX2-201ENST00000239243 DUSP5Q16690 384 aa21.75■■□□□ 1.07
MSX2-201ENST00000239243 PGBD2Q6P3X8 592 aa21.75■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms