RNA–Protein interactions for RNA: ENST00000234420.9

MSH6-201, Transcript of mutS homolog 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSH6, Length 7,476 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-201ENST00000234420 APLNRP35414 380 aa10.6□□□□□ -0.71
MSH6-201ENST00000234420 SRP14P37108 136 aaKnown RBP10.6□□□□□ -0.71
MSH6-201ENST00000234420 OR1E2P47887 323 aa10.6□□□□□ -0.71
MSH6-201ENST00000234420 WDR4P57081 412 aaKnown RBP10.6□□□□□ -0.71
MSH6-201ENST00000234420 GRB2P62993 217 aaKnown RBP10.6□□□□□ -0.71
MSH6-201ENST00000234420 PMS2P3Q13401 168 aa10.6□□□□□ -0.71
MSH6-201ENST00000234420 ALKAL2Q6UX46 152 aa10.6□□□□□ -0.71
MSH6-201ENST00000234420 STYXQ8WUJ0 223 aa10.6□□□□□ -0.71
MSH6-201ENST00000234420 ZNF775Q96BV0 537 aaPredicted RBP10.6□□□□□ -0.71
MSH6-201ENST00000234420 FBXL18Q96ME1 805 aa10.6□□□□□ -0.71
MSH6-201ENST00000234420 SLC38A1Q9H2H9 487 aa10.6□□□□□ -0.71
MSH6-201ENST00000234420 P2RX2Q9UBL9 471 aa10.6□□□□□ -0.71
MSH6-201ENST00000234420 PCDHB14Q9Y5E9 798 aa10.6□□□□□ -0.71
MSH6-201ENST00000234420 CD163L1Q9NR16 1453 aa10.6□□□□□ -0.71
MSH6-201ENST00000234420 OR51F1A6NGY5 319 aa10.59□□□□□ -0.71
MSH6-201ENST00000234420 STSP08842 583 aa10.59□□□□□ -0.71
MSH6-201ENST00000234420 HOXC6P09630 235 aa10.59□□□□□ -0.71
MSH6-201ENST00000234420 EDNRBP24530 442 aa10.59□□□□□ -0.71
MSH6-201ENST00000234420 FCER1GP30273 86 aa10.59□□□□□ -0.71
MSH6-201ENST00000234420 GABRA3P34903 492 aa10.59□□□□□ -0.71
MSH6-201ENST00000234420 FOLR3P41439 243 aa10.59□□□□□ -0.71
MSH6-201ENST00000234420 AKR1C2P52895 323 aa10.59□□□□□ -0.71
MSH6-201ENST00000234420 KCNAB2Q13303 367 aa10.59□□□□□ -0.71
MSH6-201ENST00000234420 LASP1Q14847 261 aaKnown RBP10.59□□□□□ -0.71
MSH6-201ENST00000234420 HYAL4Q2M3T9 481 aa10.59□□□□□ -0.71
MSH6-201ENST00000234420 OR4F3Q6IEY1 312 aa10.59□□□□□ -0.71
MSH6-201ENST00000234420 ZNF566Q969W8 418 aa10.59□□□□□ -0.71
MSH6-201ENST00000234420 LOC105369274A0A096LPK9 316 aa10.59□□□□□ -0.71
MSH6-201ENST00000234420 MED6O75586 246 aa10.59□□□□□ -0.71
MSH6-201ENST00000234420 PPT1P50897 306 aa10.59□□□□□ -0.71
MSH6-201ENST00000234420 EEF1A1P68104 462 aaKnown RBP10.59□□□□□ -0.71
MSH6-201ENST00000234420 NKPD1Q17RQ9 610 aa10.59□□□□□ -0.71
MSH6-201ENST00000234420 EEF1A1P5Q5VTE0 462 aa10.59□□□□□ -0.71
MSH6-201ENST00000234420 LYSMD4Q5XG99 296 aa10.59□□□□□ -0.71
MSH6-201ENST00000234420 EEF1DP3Q658K8 133 aa10.59□□□□□ -0.71
MSH6-201ENST00000234420 OR4N4Q8N0Y3 316 aa10.59□□□□□ -0.71
MSH6-201ENST00000234420 SLC43A2Q8N370 569 aa10.59□□□□□ -0.71
MSH6-201ENST00000234420 KDM1BQ8NB78 822 aa10.59□□□□□ -0.71
MSH6-201ENST00000234420 SLC22A17Q8WUG5 538 aa10.59□□□□□ -0.71
MSH6-201ENST00000234420 MED30Q96HR3 178 aa10.59□□□□□ -0.71
MSH6-201ENST00000234420 ZBTB26Q9HCK0 441 aa10.59□□□□□ -0.71
MSH6-201ENST00000234420 B3GNT2Q9NY97 397 aa10.59□□□□□ -0.71
MSH6-201ENST00000234420 MAFO75444 373 aaPredicted RBP10.59□□□□□ -0.71
MSH6-201ENST00000234420 VEGFBP49765 207 aa10.59□□□□□ -0.71
MSH6-201ENST00000234420 PLA2G7Q13093 441 aa10.59□□□□□ -0.71
MSH6-201ENST00000234420 OR5M10Q6IEU7 315 aa10.59□□□□□ -0.71
MSH6-201ENST00000234420 LINC00696Q6ZRV3 163 aa10.59□□□□□ -0.71
MSH6-201ENST00000234420 DENND1AQ8TEH3 1009 aa10.59□□□□□ -0.71
MSH6-201ENST00000234420 MGLLQ99685 303 aa10.59□□□□□ -0.71
MSH6-201ENST00000234420 LDHAL6BQ9BYZ2 381 aaPredicted RBP10.59□□□□□ -0.71
MSH6-201ENST00000234420 SSU72Q9NP77 194 aaKnown RBP10.59□□□□□ -0.71
MSH6-201ENST00000234420 SIT1Q9Y3P8 196 aa10.59□□□□□ -0.71
MSH6-201ENST00000234420 HSFX4A0A1B0GTS1 333 aaPredicted RBP10.59□□□□□ -0.71
MSH6-201ENST00000234420 HSFX3A0A1B0GWH4 333 aaPredicted RBP10.59□□□□□ -0.71
MSH6-201ENST00000234420 TRAPPC13A5PLN9 417 aa10.59□□□□□ -0.71
MSH6-201ENST00000234420 E7ESA3 106 aa10.59□□□□□ -0.71
MSH6-201ENST00000234420 SULT1C4O75897 302 aa10.59□□□□□ -0.71
MSH6-201ENST00000234420 CAPNS1P04632 268 aa10.59□□□□□ -0.71
MSH6-201ENST00000234420 RPL23AP62750 156 aaKnown RBP10.59□□□□□ -0.71
MSH6-201ENST00000234420 SIRPAP78324 504 aa10.59□□□□□ -0.71
MSH6-201ENST00000234420 TEX44Q53QW1 395 aa10.59□□□□□ -0.71
MSH6-201ENST00000234420 IRF2BP2Q7Z5L9 587 aa10.59□□□□□ -0.71
MSH6-201ENST00000234420 IL17RCQ8NAC3 791 aa10.59□□□□□ -0.71
MSH6-201ENST00000234420 OR9I1Q8NGQ6 314 aa10.59□□□□□ -0.71
MSH6-201ENST00000234420 ELP5Q8TE02 316 aa10.59□□□□□ -0.71
MSH6-201ENST00000234420 CLEC4CQ8WTT0 213 aa10.59□□□□□ -0.71
MSH6-201ENST00000234420 RLN3Q8WXF3 142 aa10.59□□□□□ -0.71
MSH6-201ENST00000234420 SGTBQ96EQ0 304 aa10.59□□□□□ -0.71
MSH6-201ENST00000234420 RBM14Q96PK6 669 aaKnown RBP10.59□□□□□ -0.71
MSH6-201ENST00000234420 OR11A1Q9GZK7 315 aa10.59□□□□□ -0.71
MSH6-201ENST00000234420 GAREM1Q9H706 876 aa10.59□□□□□ -0.71
MSH6-201ENST00000234420 ZCCHC3Q9NUD5 404 aaKnown RBP10.59□□□□□ -0.71
MSH6-201ENST00000234420 PCDH7O60245 1069 aa10.59□□□□□ -0.71
MSH6-201ENST00000234420 CILPO75339 1184 aa10.59□□□□□ -0.71
MSH6-201ENST00000234420 CLDN7O95471 211 aa10.59□□□□□ -0.71
MSH6-201ENST00000234420 ADH1BP00325 375 aa10.59□□□□□ -0.71
MSH6-201ENST00000234420 MAS1P04201 325 aa10.59□□□□□ -0.71
MSH6-201ENST00000234420 ADRB2P07550 413 aa10.59□□□□□ -0.71
MSH6-201ENST00000234420 GCH1P30793 250 aa10.59□□□□□ -0.71
MSH6-201ENST00000234420 PPP4CP60510 307 aa10.59□□□□□ -0.71
MSH6-201ENST00000234420 TRIM61Q5EBN2 209 aa10.59□□□□□ -0.71
MSH6-201ENST00000234420 DNM1P34Q6PK57 102 aa10.59□□□□□ -0.71
MSH6-201ENST00000234420 PHF13Q86YI8 300 aaPredicted RBP10.59□□□□□ -0.71
MSH6-201ENST00000234420 LRRC18Q8N456 261 aa10.59□□□□□ -0.71
MSH6-201ENST00000234420 IQCF1Q8N6M8 205 aa10.59□□□□□ -0.71
MSH6-201ENST00000234420 SLC22A18Q96BI1 424 aa10.59□□□□□ -0.71
MSH6-201ENST00000234420 OR5B2Q96R09 309 aa10.59□□□□□ -0.71
MSH6-201ENST00000234420 MICU1Q9BPX6 476 aa10.59□□□□□ -0.71
MSH6-201ENST00000234420 WWTR1Q9GZV5 400 aa10.59□□□□□ -0.71
MSH6-201ENST00000234420 SYNPO2LQ9H987 977 aa10.59□□□□□ -0.71
MSH6-201ENST00000234420 HEBP1Q9NRV9 189 aa10.59□□□□□ -0.71
MSH6-201ENST00000234420 NLE1Q9NVX2 485 aaPredicted RBP10.59□□□□□ -0.71
MSH6-201ENST00000234420 SLC17A6Q9P2U8 582 aa10.59□□□□□ -0.71
MSH6-201ENST00000234420 PURGQ9UJV8 347 aaKnown RBP10.59□□□□□ -0.71
MSH6-201ENST00000234420 MAFBQ9Y5Q3 323 aaPredicted RBP10.59□□□□□ -0.71
MSH6-201ENST00000234420 PIK3C2BO00750 1634 aa10.59□□□□□ -0.71
MSH6-201ENST00000234420 BCAS2O75934 225 aaPredicted RBP10.59□□□□□ -0.71
MSH6-201ENST00000234420 C6P13671 934 aa10.59□□□□□ -0.71
MSH6-201ENST00000234420 SLC25A52Q3SY17 297 aa10.59□□□□□ -0.71
MSH6-201ENST00000234420 SLC22A10Q63ZE4 541 aa10.59□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms