RNA–Protein interactions for RNA: ENST00000233027.9

NEK4-201, Transcript of NIMA related kinase 4, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene NEK4, Length 6,057 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK4-201ENST00000233027 HMGCLP35914 325 aa12.72□□□□□ -0.37
NEK4-201ENST00000233027 RIDAP52758 137 aaKnown RBP12.72□□□□□ -0.37
NEK4-201ENST00000233027 UBE2UQ5VVX9 321 aa12.72□□□□□ -0.37
NEK4-201ENST00000233027 METTL2BQ6P1Q9 378 aaKnown RBP12.72□□□□□ -0.37
NEK4-201ENST00000233027 CHST14Q8NCH0 376 aa12.72□□□□□ -0.37
NEK4-201ENST00000233027 NINJ1Q92982 152 aa12.72□□□□□ -0.37
NEK4-201ENST00000233027 LDHAL6BQ9BYZ2 381 aaPredicted RBP12.72□□□□□ -0.37
NEK4-201ENST00000233027 SAV1Q9H4B6 383 aaPredicted RBP12.72□□□□□ -0.37
NEK4-201ENST00000233027 ENPP5Q9UJA9 477 aa12.72□□□□□ -0.37
NEK4-201ENST00000233027 ERVK-19Q9WJR5 959 aa12.72□□□□□ -0.37
NEK4-201ENST00000233027 CEPT1Q9Y6K0 416 aa12.72□□□□□ -0.37
NEK4-201ENST00000233027 BORCS7-ASMTA0A0B4J1R7 106 aa12.71□□□□□ -0.37
NEK4-201ENST00000233027 VEGFDO43915 354 aa12.71□□□□□ -0.37
NEK4-201ENST00000233027 SHC2P98077 582 aa12.71□□□□□ -0.37
NEK4-201ENST00000233027 GNMTQ14749 295 aa12.71□□□□□ -0.37
NEK4-201ENST00000233027 RNF111Q6ZNA4 994 aa12.71□□□□□ -0.37
NEK4-201ENST00000233027 UBQLNLQ8IYU4 475 aa12.71□□□□□ -0.37
NEK4-201ENST00000233027 FTMTQ8N4E7 242 aa12.71□□□□□ -0.37
NEK4-201ENST00000233027 ARFGAP1Q8N6T3 406 aa12.71□□□□□ -0.37
NEK4-201ENST00000233027 CREB3L4Q8TEY5 395 aa12.71□□□□□ -0.37
NEK4-201ENST00000233027 PGAM5Q96HS1 289 aa12.71□□□□□ -0.37
NEK4-201ENST00000233027 SETD1AO15047 1707 aaKnown RBP12.71□□□□□ -0.37
NEK4-201ENST00000233027 RAD51DO75771 328 aa12.71□□□□□ -0.37
NEK4-201ENST00000233027 PTTG1O95997 202 aa12.71□□□□□ -0.37
NEK4-201ENST00000233027 IFNA2P01563 188 aa12.71□□□□□ -0.37
NEK4-201ENST00000233027 CD3GP09693 182 aa12.71□□□□□ -0.37
NEK4-201ENST00000233027 RPS15AP62244 130 aaKnown RBP12.71□□□□□ -0.37
NEK4-201ENST00000233027 RAB11BQ15907 218 aa12.71□□□□□ -0.37
NEK4-201ENST00000233027 GRHL2Q6ISB3 625 aa12.71□□□□□ -0.37
NEK4-201ENST00000233027 ZER1Q7Z7L7 766 aa12.71□□□□□ -0.37
NEK4-201ENST00000233027 KLHDC8AQ8IYD2 350 aa12.71□□□□□ -0.37
NEK4-201ENST00000233027 MDGA1Q8NFP4 955 aa12.71□□□□□ -0.37
NEK4-201ENST00000233027 SETD7Q8WTS6 366 aaKnown RBP12.71□□□□□ -0.37
NEK4-201ENST00000233027 OR1F2PQ96R84 312 aa12.71□□□□□ -0.37
NEK4-201ENST00000233027 ZNF559Q9BR84 538 aa12.71□□□□□ -0.37
NEK4-201ENST00000233027 CXXC1Q9P0U4 656 aaPredicted RBP12.71□□□□□ -0.37
NEK4-201ENST00000233027 C19orf25Q9UFG5 118 aaPredicted RBP12.71□□□□□ -0.37
NEK4-201ENST00000233027 KCNIP3Q9Y2W7 256 aa12.71□□□□□ -0.37
NEK4-201ENST00000233027 A0A1W2PQU0 124 aa12.71□□□□□ -0.37
NEK4-201ENST00000233027 HMX3A6NHT5 357 aa12.71□□□□□ -0.37
NEK4-201ENST00000233027 RAD1O60671 282 aa12.71□□□□□ -0.37
NEK4-201ENST00000233027 PPM1BO75688 479 aa12.71□□□□□ -0.37
NEK4-201ENST00000233027 SLC16A8O95907 504 aa12.71□□□□□ -0.37
NEK4-201ENST00000233027 ADAP00813 363 aa12.71□□□□□ -0.37
NEK4-201ENST00000233027 DRD2P14416 443 aa12.71□□□□□ -0.37
NEK4-201ENST00000233027 HTR2AP28223 471 aa12.71□□□□□ -0.37
NEK4-201ENST00000233027 GCAP28676 217 aa12.71□□□□□ -0.37
NEK4-201ENST00000233027 CD34P28906 385 aa12.71□□□□□ -0.37
NEK4-201ENST00000233027 PIN1Q13526 163 aaPredicted RBP12.71□□□□□ -0.37
NEK4-201ENST00000233027 ANKK1Q8NFD2 765 aa12.71□□□□□ -0.37
NEK4-201ENST00000233027 GATA6Q92908 595 aa12.71□□□□□ -0.37
NEK4-201ENST00000233027 RHBDF1Q96CC6 855 aa12.71□□□□□ -0.37
NEK4-201ENST00000233027 PEX11GQ96HA9 241 aa12.71□□□□□ -0.37
NEK4-201ENST00000233027 PTGESO14684 152 aa12.71□□□□□ -0.38
NEK4-201ENST00000233027 LYRM1O43325 122 aa12.71□□□□□ -0.38
NEK4-201ENST00000233027 FBLP22087 321 aaKnown RBP12.71□□□□□ -0.38
NEK4-201ENST00000233027 CHMP24386 653 aa12.71□□□□□ -0.38
NEK4-201ENST00000233027 NDUFAF5Q5TEU4 345 aa12.71□□□□□ -0.38
NEK4-201ENST00000233027 TMEM173Q86WV6 379 aaPredicted RBP12.71□□□□□ -0.38
NEK4-201ENST00000233027 ZNF709Q8N972 641 aa12.71□□□□□ -0.38
NEK4-201ENST00000233027 TMEM234Q8WY98 164 aa12.71□□□□□ -0.38
NEK4-201ENST00000233027 HS6ST2Q96MM7 605 aa12.71□□□□□ -0.38
NEK4-201ENST00000233027 SDR39U1Q9NRG7 319 aaPredicted RBP12.71□□□□□ -0.38
NEK4-201ENST00000233027 PPP6CO00743 305 aa12.71□□□□□ -0.38
NEK4-201ENST00000233027 PTGER1P34995 402 aa12.71□□□□□ -0.38
NEK4-201ENST00000233027 ALG10BQ5I7T1 473 aa12.71□□□□□ -0.38
NEK4-201ENST00000233027 SYT14Q8NB59 555 aa12.71□□□□□ -0.38
NEK4-201ENST00000233027 C3orf30Q96M34 536 aa12.71□□□□□ -0.38
NEK4-201ENST00000233027 FOLH1BQ9HBA9 442 aa12.71□□□□□ -0.38
NEK4-201ENST00000233027 PPP4R1LQ9P1A2 415 aa12.71□□□□□ -0.38
NEK4-201ENST00000233027 MYH13Q9UKX3 1938 aa12.7□□□□□ -0.38
NEK4-201ENST00000233027 SNAPC5O75971 98 aa12.7□□□□□ -0.38
NEK4-201ENST00000233027 PRMT2P55345 433 aa12.7□□□□□ -0.38
NEK4-201ENST00000233027 CLDN10P78369 228 aa12.7□□□□□ -0.38
NEK4-201ENST00000233027 TP53I3Q53FA7 332 aa12.7□□□□□ -0.38
NEK4-201ENST00000233027 PM20D1Q6GTS8 502 aa12.7□□□□□ -0.38
NEK4-201ENST00000233027 CNIH2Q6PI25 160 aa12.7□□□□□ -0.38
NEK4-201ENST00000233027 ZNF761Q86XN6 746 aaPredicted RBP12.7□□□□□ -0.38
NEK4-201ENST00000233027 ARL14Q8N4G2 192 aa12.7□□□□□ -0.38
NEK4-201ENST00000233027 TREX2Q9BQ50 279 aaPredicted RBP12.7□□□□□ -0.38
NEK4-201ENST00000233027 SMCO3A2RU48 225 aa12.7□□□□□ -0.38
NEK4-201ENST00000233027 GJB3O75712 270 aa12.7□□□□□ -0.38
NEK4-201ENST00000233027 AMY2AP04746 511 aa12.7□□□□□ -0.38
NEK4-201ENST00000233027 SELENOWP63302 87 aa12.7□□□□□ -0.38
NEK4-201ENST00000233027 S100A12P80511 92 aa12.7□□□□□ -0.38
NEK4-201ENST00000233027 ZNF616Q08AN1 781 aa12.7□□□□□ -0.38
NEK4-201ENST00000233027 RANBP10Q6VN20 620 aa12.7□□□□□ -0.38
NEK4-201ENST00000233027 LRRTM3Q86VH5 581 aa12.7□□□□□ -0.38
NEK4-201ENST00000233027 SPARTQ8N0X7 666 aa12.7□□□□□ -0.38
NEK4-201ENST00000233027 OR5D16Q8NGK9 328 aa12.7□□□□□ -0.38
NEK4-201ENST00000233027 WDR92Q96MX6 357 aa12.7□□□□□ -0.38
NEK4-201ENST00000233027 TMEM184CQ9NVA4 438 aa12.7□□□□□ -0.38
NEK4-201ENST00000233027 VAPAQ9P0L0 249 aa12.7□□□□□ -0.38
NEK4-201ENST00000233027 ENPP4Q9Y6X5 453 aa12.7□□□□□ -0.38
NEK4-201ENST00000233027 KLHL33A6NCF5 533 aa12.7□□□□□ -0.38
NEK4-201ENST00000233027 CLEC3AO75596 197 aa12.7□□□□□ -0.38
NEK4-201ENST00000233027 PFKMP08237 780 aa12.7□□□□□ -0.38
NEK4-201ENST00000233027 PLEKHN1Q494U1 663 aaPredicted RBP12.7□□□□□ -0.38
NEK4-201ENST00000233027 KRBOX4Q5JUW0 171 aa12.7□□□□□ -0.38
NEK4-201ENST00000233027 TMEM205Q6UW68 189 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 91 ms