RNA–Protein interactions for RNA: ENST00000230480.10

VEGFA-201, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 993 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-201ENST00000230480 THAP1Q9NVV9 213 aa12.62□□□□□ -0.39
VEGFA-201ENST00000230480 TUBA8Q9NY65 449 aaPredicted RBP12.62□□□□□ -0.39
VEGFA-201ENST00000230480 ZNF835Q9Y2P0 537 aa12.62□□□□□ -0.39
VEGFA-201ENST00000230480 A0A087WV62 115 aa12.61□□□□□ -0.39
VEGFA-201ENST00000230480 C17orf51A8MQB3 221 aa12.61□□□□□ -0.39
VEGFA-201ENST00000230480 EBAG9O00559 213 aa12.61□□□□□ -0.39
VEGFA-201ENST00000230480 SCAMP2O15127 329 aaKnown RBP12.61□□□□□ -0.39
VEGFA-201ENST00000230480 TSPAN2O60636 221 aa12.61□□□□□ -0.39
VEGFA-201ENST00000230480 VPS4BO75351 444 aa12.61□□□□□ -0.39
VEGFA-201ENST00000230480 CHEK2O96017 543 aa12.61□□□□□ -0.39
VEGFA-201ENST00000230480 CELA3AP09093 270 aa12.61□□□□□ -0.39
VEGFA-201ENST00000230480 ABCD3P28288 659 aa12.61□□□□□ -0.39
VEGFA-201ENST00000230480 IL12AP29459 219 aa12.61□□□□□ -0.39
VEGFA-201ENST00000230480 ZFP36L2P47974 494 aaKnown RBP12.61□□□□□ -0.39
VEGFA-201ENST00000230480 NCBP2P52298 156 aaKnown RBP eCLIP12.61□□□□□ -0.39
VEGFA-201ENST00000230480 CLDN8P56748 225 aa12.61□□□□□ -0.39
VEGFA-201ENST00000230480 HYAL4Q2M3T9 481 aa12.61□□□□□ -0.39
VEGFA-201ENST00000230480 TMEM107Q6UX40 140 aa12.61□□□□□ -0.39
VEGFA-201ENST00000230480 SLC29A4Q7RTT9 530 aa12.61□□□□□ -0.39
VEGFA-201ENST00000230480 ATCAYQ86WG3 371 aa12.61□□□□□ -0.39
VEGFA-201ENST00000230480 FAM9CQ8IZT9 166 aa12.61□□□□□ -0.39
VEGFA-201ENST00000230480 PPP1R14CQ8TAE6 165 aa12.61□□□□□ -0.39
VEGFA-201ENST00000230480 SPPL2AQ8TCT8 520 aa12.61□□□□□ -0.39
VEGFA-201ENST00000230480 TUBGCP3Q96CW5 907 aa12.61□□□□□ -0.39
VEGFA-201ENST00000230480 ERP27Q96DN0 273 aa12.61□□□□□ -0.39
VEGFA-201ENST00000230480 MAELQ96JY0 434 aaKnown RBP12.61□□□□□ -0.39
VEGFA-201ENST00000230480 SGCZQ96LD1 299 aa12.61□□□□□ -0.39
VEGFA-201ENST00000230480 GPR137Q96N19 417 aa12.61□□□□□ -0.39
VEGFA-201ENST00000230480 RTN4RQ9BZR6 473 aa12.61□□□□□ -0.39
VEGFA-201ENST00000230480 STMN4Q9H169 189 aaPredicted RBP12.61□□□□□ -0.39
VEGFA-201ENST00000230480 WDR55Q9H6Y2 383 aaPredicted RBP12.61□□□□□ -0.39
VEGFA-201ENST00000230480 FOLH1BQ9HBA9 442 aa12.61□□□□□ -0.39
VEGFA-201ENST00000230480 SLCO1B3Q9NPD5 702 aa12.61□□□□□ -0.39
VEGFA-201ENST00000230480 AGPAT4Q9NRZ5 378 aa12.61□□□□□ -0.39
VEGFA-201ENST00000230480 BCAP29Q9UHQ4 241 aa12.61□□□□□ -0.39
VEGFA-201ENST00000230480 VPS4AQ9UN37 437 aa12.61□□□□□ -0.39
VEGFA-201ENST00000230480 LIPGQ9Y5X9 500 aa12.61□□□□□ -0.39
VEGFA-201ENST00000230480 NPIPA5E9PKD4 350 aa12.6□□□□□ -0.39
VEGFA-201ENST00000230480 ASNA1O43681 348 aa12.6□□□□□ -0.39
VEGFA-201ENST00000230480 HS6ST1O60243 411 aa12.6□□□□□ -0.39
VEGFA-201ENST00000230480 UGT2B11O75310 529 aa12.6□□□□□ -0.39
VEGFA-201ENST00000230480 TRIM3O75382 744 aaPredicted RBP12.6□□□□□ -0.39
VEGFA-201ENST00000230480 UNC5CO95185 931 aa12.6□□□□□ -0.39
VEGFA-201ENST00000230480 IGKV1D-16P01601 117 aa12.6□□□□□ -0.39
VEGFA-201ENST00000230480 STSP08842 583 aa12.6□□□□□ -0.39
VEGFA-201ENST00000230480 IFI6P09912 130 aa12.6□□□□□ -0.39
VEGFA-201ENST00000230480 CD1EP15812 388 aa12.6□□□□□ -0.39
VEGFA-201ENST00000230480 MPIP34949 423 aa12.6□□□□□ -0.39
VEGFA-201ENST00000230480 SMU1Q2TAY7 513 aa12.6□□□□□ -0.39
VEGFA-201ENST00000230480 SLC9B1Q4ZJI4 515 aa12.6□□□□□ -0.39
VEGFA-201ENST00000230480 ATP6AP1LQ52LC2 224 aa12.6□□□□□ -0.39
VEGFA-201ENST00000230480 PRAMEF20Q5VT98 475 aa12.6□□□□□ -0.39
VEGFA-201ENST00000230480 SLC22A10Q63ZE4 541 aa12.6□□□□□ -0.39
VEGFA-201ENST00000230480 OGFOD2Q6N063 350 aa12.6□□□□□ -0.39
VEGFA-201ENST00000230480 FBXW8Q8N3Y1 598 aa12.6□□□□□ -0.39
VEGFA-201ENST00000230480 PSMA8Q8TAA3 256 aa12.6□□□□□ -0.39
VEGFA-201ENST00000230480 RAB3IL1Q8TBN0 382 aa12.6□□□□□ -0.39
VEGFA-201ENST00000230480 MTERF3Q96E29 417 aa12.6□□□□□ -0.39
VEGFA-201ENST00000230480 LCORQ96JN0 433 aaPredicted RBP12.6□□□□□ -0.39
VEGFA-201ENST00000230480 BBS4Q96RK4 519 aa12.6□□□□□ -0.39
VEGFA-201ENST00000230480 ZDHHC11Q9H8X9 412 aa12.6□□□□□ -0.39
VEGFA-201ENST00000230480 TIMMDC1Q9NPL8 285 aa12.6□□□□□ -0.39
VEGFA-201ENST00000230480 MIEF1Q9NQG6 463 aa12.6□□□□□ -0.39
VEGFA-201ENST00000230480 SDAD1Q9NVU7 687 aaKnown RBP eCLIP12.6□□□□□ -0.395e-7■■□□□ 11.6
VEGFA-201ENST00000230480 FLRT3Q9NZU0 649 aa12.6□□□□□ -0.39
VEGFA-201ENST00000230480 MARCOQ9UEW3 520 aaPredicted RBP12.6□□□□□ -0.39
VEGFA-201ENST00000230480 NPIPA1Q9UND3 350 aa12.6□□□□□ -0.39
VEGFA-201ENST00000230480 KLF13Q9Y2Y9 288 aaPredicted RBP12.6□□□□□ -0.39
VEGFA-201ENST00000230480 ANKRD33BA6NCL7 494 aa12.59□□□□□ -0.39
VEGFA-201ENST00000230480 FRG2CA6NGY1 282 aa12.59□□□□□ -0.39
VEGFA-201ENST00000230480 CYSRT1A8MQ03 144 aa12.59□□□□□ -0.39
VEGFA-201ENST00000230480 DYRK3O43781 588 aa12.59□□□□□ -0.39
VEGFA-201ENST00000230480 CRYABP02511 175 aaKnown RBP12.59□□□□□ -0.39
VEGFA-201ENST00000230480 PRPS2P11908 318 aa12.59□□□□□ -0.39
VEGFA-201ENST00000230480 NAGAP17050 411 aa12.59□□□□□ -0.39
VEGFA-201ENST00000230480 EPHA3P29320 983 aa12.59□□□□□ -0.39
VEGFA-201ENST00000230480 CASP3P42574 277 aa12.59□□□□□ -0.39
VEGFA-201ENST00000230480 GAS1P54826 345 aa12.59□□□□□ -0.39
VEGFA-201ENST00000230480 ALDH6A1Q02252 535 aaKnown RBP12.59□□□□□ -0.39
VEGFA-201ENST00000230480 GAB1Q13480 694 aa12.59□□□□□ -0.39
VEGFA-201ENST00000230480 UBAP2LQ14157 1087 aaKnown RBP12.59□□□□□ -0.39
VEGFA-201ENST00000230480 MLC1Q15049 377 aa12.59□□□□□ -0.39
VEGFA-201ENST00000230480 EMC4Q5J8M3 183 aa12.59□□□□□ -0.39
VEGFA-201ENST00000230480 Q6ZPB1 254 aaPredicted RBP12.59□□□□□ -0.39
VEGFA-201ENST00000230480 CAMKMTQ7Z624 323 aa12.59□□□□□ -0.39
VEGFA-201ENST00000230480 SAMD14Q8IZD0 417 aaPredicted RBP12.59□□□□□ -0.39
VEGFA-201ENST00000230480 TMEM251Q8N6I4 163 aa12.59□□□□□ -0.39
VEGFA-201ENST00000230480 HORMAD2Q8N7B1 307 aa12.59□□□□□ -0.39
VEGFA-201ENST00000230480 FNDC5Q8NAU1 212 aa12.59□□□□□ -0.39
VEGFA-201ENST00000230480 OR5M3Q8NGP4 307 aa12.59□□□□□ -0.39
VEGFA-201ENST00000230480 PRR7Q8TB68 274 aa12.59□□□□□ -0.39
VEGFA-201ENST00000230480 SLC22A8Q8TCC7 542 aa12.59□□□□□ -0.39
VEGFA-201ENST00000230480 TMEM125Q96AQ2 219 aa12.59□□□□□ -0.39
VEGFA-201ENST00000230480 PPCDCQ96CD2 204 aa12.59□□□□□ -0.39
VEGFA-201ENST00000230480 OMA1Q96E52 524 aa12.59□□□□□ -0.39
VEGFA-201ENST00000230480 C16orf58Q96GQ5 468 aa12.59□□□□□ -0.39
VEGFA-201ENST00000230480 PSMG3-AS1Q96PY0 264 aa12.59□□□□□ -0.39
VEGFA-201ENST00000230480 OR52B2Q96RD2 323 aa12.59□□□□□ -0.39
VEGFA-201ENST00000230480 LMF2Q9BU23 707 aaKnown RBP12.59□□□□□ -0.39
VEGFA-201ENST00000230480 ANGPTL4Q9BY76 406 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 64.9 ms