RNA–Protein interactions for RNA: ENST00000225441.11

RUNDC3A-201, Transcript of RUN domain containing 3A, humanhuman

TSL 1 (best) BASIC

Gene RUNDC3A, Length 1,821 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUNDC3A-201ENST00000225441 CCBE1Q6UXH8 406 aaPredicted RBP23.44■■□□□ 1.34
RUNDC3A-201ENST00000225441 PRRC1Q96M27 445 aa23.44■■□□□ 1.34
RUNDC3A-201ENST00000225441 AMDHD1Q96NU7 426 aa23.44■■□□□ 1.34
RUNDC3A-201ENST00000225441 OR51I1Q9H343 314 aa23.44■■□□□ 1.34
RUNDC3A-201ENST00000225441 SLC35C2Q9NQQ7 365 aa23.44■■□□□ 1.34
RUNDC3A-201ENST00000225441 H7BY64 318 aa23.43■■□□□ 1.34
RUNDC3A-201ENST00000225441 MYL12BO14950 172 aa23.43■■□□□ 1.34
RUNDC3A-201ENST00000225441 OR1F1O43749 312 aa23.43■■□□□ 1.34
RUNDC3A-201ENST00000225441 KCNJ13O60928 360 aa23.43■■□□□ 1.34
RUNDC3A-201ENST00000225441 RAB36O95755 333 aa23.43■■□□□ 1.34
RUNDC3A-201ENST00000225441 IFNGR2P38484 337 aa23.43■■□□□ 1.34
RUNDC3A-201ENST00000225441 CSNK1G2P78368 415 aa23.43■■□□□ 1.34
RUNDC3A-201ENST00000225441 RUNX1T1Q06455 604 aa23.43■■□□□ 1.34
RUNDC3A-201ENST00000225441 C3orf38Q5JPI3 329 aa23.43■■□□□ 1.34
RUNDC3A-201ENST00000225441 GDPD3Q7L5L3 318 aa23.43■■□□□ 1.34
RUNDC3A-201ENST00000225441 SUN3Q8TAQ9 357 aa23.43■■□□□ 1.34
RUNDC3A-201ENST00000225441 PRAP1Q96NZ9 151 aa23.43■■□□□ 1.34
RUNDC3A-201ENST00000225441 SERHL2Q9H4I8 314 aa23.43■■□□□ 1.34
RUNDC3A-201ENST00000225441 DNAJC27Q9NZQ0 273 aa23.43■■□□□ 1.34
RUNDC3A-201ENST00000225441 TRIOO75962 3097 aa23.43■■□□□ 1.34
RUNDC3A-201ENST00000225441 HTR3EA5X5Y0 456 aa23.43■■□□□ 1.34
RUNDC3A-201ENST00000225441 SYT5O00445 386 aa23.43■■□□□ 1.34
RUNDC3A-201ENST00000225441 APBB3O95704 486 aa23.43■■□□□ 1.34
RUNDC3A-201ENST00000225441 IL1AP01583 271 aa23.43■■□□□ 1.34
RUNDC3A-201ENST00000225441 OR12D1P0DN82 309 aa23.43■■□□□ 1.34
RUNDC3A-201ENST00000225441 TNFSF8P32971 234 aa23.43■■□□□ 1.34
RUNDC3A-201ENST00000225441 ZXDAP98168 799 aa23.43■■□□□ 1.34
RUNDC3A-201ENST00000225441 EFNB1P98172 346 aa23.43■■□□□ 1.34
RUNDC3A-201ENST00000225441 CDK5Q00535 292 aa23.43■■□□□ 1.34
RUNDC3A-201ENST00000225441 PRDX1Q06830 199 aaKnown RBP23.43■■□□□ 1.34
RUNDC3A-201ENST00000225441 BCL2A1Q16548 175 aa23.43■■□□□ 1.34
RUNDC3A-201ENST00000225441 DESI1Q6ICB0 168 aa23.43■■□□□ 1.34
RUNDC3A-201ENST00000225441 PODNL1Q6PEZ8 512 aa23.43■■□□□ 1.34
RUNDC3A-201ENST00000225441 C2orf73Q8N5S3 287 aaPredicted RBP23.43■■□□□ 1.34
RUNDC3A-201ENST00000225441 TCEANCQ8N8B7 351 aa23.43■■□□□ 1.34
RUNDC3A-201ENST00000225441 OR4D11Q8NGI4 311 aa23.43■■□□□ 1.34
RUNDC3A-201ENST00000225441 CREB3L4Q8TEY5 395 aa23.43■■□□□ 1.34
RUNDC3A-201ENST00000225441 TOE1Q96GM8 510 aaKnown RBP23.43■■□□□ 1.34
RUNDC3A-201ENST00000225441 CNPPD1Q9BV87 410 aa23.43■■□□□ 1.34
RUNDC3A-201ENST00000225441 PINK1Q9BXM7 581 aa23.43■■□□□ 1.34
RUNDC3A-201ENST00000225441 RSPO3Q9BXY4 272 aaPredicted RBP23.43■■□□□ 1.34
RUNDC3A-201ENST00000225441 TPSD1Q9BZJ3 242 aa23.43■■□□□ 1.34
RUNDC3A-201ENST00000225441 POLR2J2Q9GZM3 115 aaKnown RBP23.43■■□□□ 1.34
RUNDC3A-201ENST00000225441 ABCG4Q9H172 646 aa23.43■■□□□ 1.34
RUNDC3A-201ENST00000225441 GLIPR2Q9H4G4 154 aa23.43■■□□□ 1.34
RUNDC3A-201ENST00000225441 SIT1Q9Y3P8 196 aa23.43■■□□□ 1.34
RUNDC3A-201ENST00000225441 PCDHGB2Q9Y5G2 931 aa23.43■■□□□ 1.34
RUNDC3A-201ENST00000225441 SNX11Q9Y5W9 270 aa23.43■■□□□ 1.34
RUNDC3A-201ENST00000225441 COL6A3P12111 3177 aa23.42■■□□□ 1.34
RUNDC3A-201ENST00000225441 FAM227AF5H4B4 570 aa23.42■■□□□ 1.34
RUNDC3A-201ENST00000225441 LATO43561 262 aa23.42■■□□□ 1.34
RUNDC3A-201ENST00000225441 TPST2O60704 377 aa23.42■■□□□ 1.34
RUNDC3A-201ENST00000225441 ZNF217O75362 1048 aa23.42■■□□□ 1.34
RUNDC3A-201ENST00000225441 GPC1P35052 558 aa23.42■■□□□ 1.34
RUNDC3A-201ENST00000225441 GIPRP48546 466 aa23.42■■□□□ 1.34
RUNDC3A-201ENST00000225441 SMSP52788 366 aa23.42■■□□□ 1.34
RUNDC3A-201ENST00000225441 ZIC1Q15915 447 aa23.42■■□□□ 1.34
RUNDC3A-201ENST00000225441 MRGPREQ86SM8 312 aa23.42■■□□□ 1.34
RUNDC3A-201ENST00000225441 CLDN22Q8N7P3 220 aa23.42■■□□□ 1.34
RUNDC3A-201ENST00000225441 OR56A1Q8NGH5 318 aa23.42■■□□□ 1.34
RUNDC3A-201ENST00000225441 VANGL1Q8TAA9 524 aaPredicted RBP23.42■■□□□ 1.34
RUNDC3A-201ENST00000225441 DPH7Q9BTV6 452 aa23.42■■□□□ 1.34
RUNDC3A-201ENST00000225441 MED18Q9BUE0 208 aa23.42■■□□□ 1.34
RUNDC3A-201ENST00000225441 PRRG3Q9BZD7 231 aa23.42■■□□□ 1.34
RUNDC3A-201ENST00000225441 SACM1LQ9NTJ5 587 aa23.42■■□□□ 1.34
RUNDC3A-201ENST00000225441 TEX10Q9NXF1 929 aaPredicted RBP23.42■■□□□ 1.34
RUNDC3A-201ENST00000225441 WSB2Q9NYS7 404 aaPredicted RBP23.42■■□□□ 1.34
RUNDC3A-201ENST00000225441 TESQ9UGI8 421 aaKnown RBP23.42■■□□□ 1.34
RUNDC3A-201ENST00000225441 PCDHGA4Q9Y5G9 962 aa23.42■■□□□ 1.34
RUNDC3A-201ENST00000225441 ABATP80404 500 aa23.41■■□□□ 1.34
RUNDC3A-201ENST00000225441 BNC1Q01954 994 aa23.41■■□□□ 1.34
RUNDC3A-201ENST00000225441 SYPL1Q16563 259 aa23.41■■□□□ 1.34
RUNDC3A-201ENST00000225441 SLC6A18Q96N87 628 aa23.41■■□□□ 1.34
RUNDC3A-201ENST00000225441 SDHCQ99643 169 aaPredicted RBP23.41■■□□□ 1.34
RUNDC3A-201ENST00000225441 CTRCQ99895 268 aa23.41■■□□□ 1.34
RUNDC3A-201ENST00000225441 ANKRD19PQ9H560 264 aa23.41■■□□□ 1.34
RUNDC3A-201ENST00000225441 C6orf106Q9H6K1 298 aaPredicted RBP23.41■■□□□ 1.34
RUNDC3A-201ENST00000225441 FGF20Q9NP95 211 aaPredicted RBP23.41■■□□□ 1.34
RUNDC3A-201ENST00000225441 PRDM8Q9NQV8 689 aa23.41■■□□□ 1.34
RUNDC3A-201ENST00000225441 ZCCHC3Q9NUD5 404 aaKnown RBP23.41■■□□□ 1.34
RUNDC3A-201ENST00000225441 PCYT1BQ9Y5K3 369 aaPredicted RBP23.41■■□□□ 1.34
RUNDC3A-201ENST00000225441 DOCK9Q9BZ29 2069 aa23.41■■□□□ 1.34
RUNDC3A-201ENST00000225441 LRIT2A6NDA9 550 aa23.4■■□□□ 1.34
RUNDC3A-201ENST00000225441 SOX14O95416 240 aa23.4■■□□□ 1.34
RUNDC3A-201ENST00000225441 CPEP16870 476 aa23.4■■□□□ 1.34
RUNDC3A-201ENST00000225441 HNRNPA2B1P22626 353 aaKnown RBP23.4■■□□□ 1.34
RUNDC3A-201ENST00000225441 RPS19P39019 145 aaKnown RBP23.4■■□□□ 1.34
RUNDC3A-201ENST00000225441 SSR2P43308 183 aa23.4■■□□□ 1.34
RUNDC3A-201ENST00000225441 TSFMP43897 325 aaKnown RBP23.4■■□□□ 1.34
RUNDC3A-201ENST00000225441 KCNJ8Q15842 424 aa23.4■■□□□ 1.34
RUNDC3A-201ENST00000225441 TMEM44Q2T9K0 475 aa23.4■■□□□ 1.34
RUNDC3A-201ENST00000225441 NDUFAF5Q5TEU4 345 aa23.4■■□□□ 1.34
RUNDC3A-201ENST00000225441 XAGE5Q8WWM1 108 aa23.4■■□□□ 1.34
RUNDC3A-201ENST00000225441 FGF11Q92914 225 aa23.4■■□□□ 1.34
RUNDC3A-201ENST00000225441 APOOQ9BUR5 198 aa23.4■■□□□ 1.34
RUNDC3A-201ENST00000225441 EXOSC4Q9NPD3 245 aaKnown RBP23.4■■□□□ 1.34
RUNDC3A-201ENST00000225441 PRAMEF27A3QJZ7 478 aa23.4■■□□□ 1.34
RUNDC3A-201ENST00000225441 CTDSP2O14595 271 aa23.4■■□□□ 1.34
RUNDC3A-201ENST00000225441 DCNP07585 359 aaKnown RBP23.4■■□□□ 1.34
RUNDC3A-201ENST00000225441 RAB28P51157 221 aa23.4■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms