RNA–Protein interactions for RNA: ENST00000223398.10

CLIP2-201, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLIP2, Length 5,563 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-201ENST00000223398 RBMX2Q9Y388 322 aaKnown RBP17.48■□□□□ 0.39
CLIP2-201ENST00000223398 SLX4Q8IY92 1834 aa17.48■□□□□ 0.39
CLIP2-201ENST00000223398 GGT3PA6NGU5 568 aa17.48■□□□□ 0.39
CLIP2-201ENST00000223398 M0R3H8 397 aa17.48■□□□□ 0.39
CLIP2-201ENST00000223398 FLRT2O43155 660 aa17.48■□□□□ 0.39
CLIP2-201ENST00000223398 BNIP3Q12983 259 aa17.48■□□□□ 0.39
CLIP2-201ENST00000223398 LIPKQ5VXJ0 399 aa17.48■□□□□ 0.39
CLIP2-201ENST00000223398 OR51L1Q8NGJ5 315 aa17.48■□□□□ 0.39
CLIP2-201ENST00000223398 SPRYD4Q8WW59 207 aaPredicted RBP17.48■□□□□ 0.39
CLIP2-201ENST00000223398 SLC39A13Q96H72 371 aa17.48■□□□□ 0.39
CLIP2-201ENST00000223398 LOC285095A0A1B0GVY8 99 aa17.48■□□□□ 0.39
CLIP2-201ENST00000223398 C1orf105O95561 183 aa17.48■□□□□ 0.39
CLIP2-201ENST00000223398 ZNF35P13682 527 aa17.48■□□□□ 0.39
CLIP2-201ENST00000223398 EPHA4P54764 986 aa17.48■□□□□ 0.39
CLIP2-201ENST00000223398 TLE3Q04726 772 aa17.48■□□□□ 0.39
CLIP2-201ENST00000223398 ANKDD1AQ495B1 522 aa17.48■□□□□ 0.39
CLIP2-201ENST00000223398 MEDAGQ5VYS4 303 aa17.48■□□□□ 0.39
CLIP2-201ENST00000223398 CCSAPQ6IQ19 270 aaPredicted RBP17.48■□□□□ 0.39
CLIP2-201ENST00000223398 HOXD1Q9GZZ0 328 aa17.48■□□□□ 0.39
CLIP2-201ENST00000223398 OR6C2Q9NZP2 312 aa17.48■□□□□ 0.39
CLIP2-201ENST00000223398 KCNS2Q9ULS6 477 aa17.48■□□□□ 0.39
CLIP2-201ENST00000223398 TEX13CA0A0J9YWL9 993 aa17.48■□□□□ 0.39
CLIP2-201ENST00000223398 HTRA2O43464 458 aaPredicted RBP17.48■□□□□ 0.39
CLIP2-201ENST00000223398 GKN3PP0CG01 181 aa17.48■□□□□ 0.39
CLIP2-201ENST00000223398 CSNK1DP48730 415 aa17.48■□□□□ 0.39
CLIP2-201ENST00000223398 BLMHQ13867 455 aa17.48■□□□□ 0.39
CLIP2-201ENST00000223398 GPR149Q86SP6 731 aa17.48■□□□□ 0.39
CLIP2-201ENST00000223398 DTX3Q8N9I9 347 aa17.48■□□□□ 0.39
CLIP2-201ENST00000223398 PSD4Q8NDX1 1056 aa17.48■□□□□ 0.39
CLIP2-201ENST00000223398 DNAAF1Q8NEP3 725 aa17.48■□□□□ 0.39
CLIP2-201ENST00000223398 OR52R1Q8NGF1 315 aa17.48■□□□□ 0.39
CLIP2-201ENST00000223398 TRIM43Q96BQ3 446 aaPredicted RBP17.48■□□□□ 0.39
CLIP2-201ENST00000223398 S100A16Q96FQ6 103 aaKnown RBP17.48■□□□□ 0.39
CLIP2-201ENST00000223398 TIMM29Q9BSF4 260 aa17.48■□□□□ 0.39
CLIP2-201ENST00000223398 MKS1Q9NXB0 559 aa17.48■□□□□ 0.39
CLIP2-201ENST00000223398 SH3PXD2BA1X283 911 aa17.47■□□□□ 0.39
CLIP2-201ENST00000223398 ANTXRLA6NF34 631 aa17.47■□□□□ 0.39
CLIP2-201ENST00000223398 IFNA21P01568 189 aa17.47■□□□□ 0.39
CLIP2-201ENST00000223398 TIGD4Q8IY51 512 aa17.47■□□□□ 0.39
CLIP2-201ENST00000223398 IL17RCQ8NAC3 791 aa17.47■□□□□ 0.39
CLIP2-201ENST00000223398 TMEM265A0A087WTH1 108 aa17.47■□□□□ 0.39
CLIP2-201ENST00000223398 NSG1A0A0A6YYJ2 146 aa17.47■□□□□ 0.39
CLIP2-201ENST00000223398 C13orf42A0A1B0GVH6 325 aa17.47■□□□□ 0.39
CLIP2-201ENST00000223398 TEX46H3BTG2 121 aa17.47■□□□□ 0.39
CLIP2-201ENST00000223398 PRLP01236 227 aa17.47■□□□□ 0.39
CLIP2-201ENST00000223398 ZNF806P0C7X5 589 aa17.47■□□□□ 0.39
CLIP2-201ENST00000223398 PRLHRP49683 370 aa17.47■□□□□ 0.39
CLIP2-201ENST00000223398 AFF3P51826 1226 aaKnown RBP17.47■□□□□ 0.39
CLIP2-201ENST00000223398 MVKQ03426 396 aa17.47■□□□□ 0.39
CLIP2-201ENST00000223398 SEC23BQ15437 767 aa17.47■□□□□ 0.39
CLIP2-201ENST00000223398 WSCD2Q2TBF2 565 aa17.47■□□□□ 0.39
CLIP2-201ENST00000223398 OR13J1Q8NGT2 312 aa17.47■□□□□ 0.39
CLIP2-201ENST00000223398 OR51B6Q9H340 312 aa17.47■□□□□ 0.39
CLIP2-201ENST00000223398 C14orf166Q9Y224 244 aaKnown RBP17.47■□□□□ 0.39
CLIP2-201ENST00000223398 SCRG1O75711 98 aa17.47■□□□□ 0.39
CLIP2-201ENST00000223398 MAP4K2Q12851 820 aa17.47■□□□□ 0.39
CLIP2-201ENST00000223398 SMAD2Q15796 467 aaKnown RBP17.47■□□□□ 0.39
CLIP2-201ENST00000223398 GLT8D1Q68CQ7 371 aa17.47■□□□□ 0.39
CLIP2-201ENST00000223398 RPL13AP3Q6NVV1 102 aa17.47■□□□□ 0.39
CLIP2-201ENST00000223398 BMFQ96LC9 184 aa17.47■□□□□ 0.39
CLIP2-201ENST00000223398 SLC6A18Q96N87 628 aa17.47■□□□□ 0.39
CLIP2-201ENST00000223398 ADOQ96SZ5 270 aa17.47■□□□□ 0.39
CLIP2-201ENST00000223398 WACQ9BTA9 647 aa17.47■□□□□ 0.39
CLIP2-201ENST00000223398 FN3KQ9H479 309 aa17.47■□□□□ 0.39
CLIP2-201ENST00000223398 GPR52Q9Y2T5 361 aa17.47■□□□□ 0.39
CLIP2-201ENST00000223398 H3BNC9 293 aa17.47■□□□□ 0.39
CLIP2-201ENST00000223398 H3BSA7 217 aa17.47■□□□□ 0.39
CLIP2-201ENST00000223398 MAP2K4P45985 399 aa17.47■□□□□ 0.39
CLIP2-201ENST00000223398 SSX6Q7RTT6 188 aa17.47■□□□□ 0.39
CLIP2-201ENST00000223398 CDRT4Q8N9R6 151 aa17.47■□□□□ 0.39
CLIP2-201ENST00000223398 SLC5A7Q9GZV3 580 aa17.47■□□□□ 0.39
CLIP2-201ENST00000223398 CDH10Q9Y6N8 788 aa17.47■□□□□ 0.39
CLIP2-201ENST00000223398 IRF2P14316 349 aa17.47■□□□□ 0.39
CLIP2-201ENST00000223398 CRISP1P54107 249 aa17.47■□□□□ 0.39
CLIP2-201ENST00000223398 FAM189A2Q15884 450 aa17.47■□□□□ 0.39
CLIP2-201ENST00000223398 TMEM184AQ6ZMB5 413 aa17.47■□□□□ 0.39
CLIP2-201ENST00000223398 GALNT6Q8NCL4 622 aa17.47■□□□□ 0.39
CLIP2-201ENST00000223398 OR8H1Q8NGG4 311 aa17.47■□□□□ 0.39
CLIP2-201ENST00000223398 OR13C3Q8NGS6 347 aa17.47■□□□□ 0.39
CLIP2-201ENST00000223398 CCDC107Q8WV48 283 aa17.47■□□□□ 0.39
CLIP2-201ENST00000223398 GATAD2BQ8WXI9 593 aa17.47■□□□□ 0.39
CLIP2-201ENST00000223398 GJE1A6NN92 205 aa17.46■□□□□ 0.39
CLIP2-201ENST00000223398 GRIK2Q13002 908 aa17.46■□□□□ 0.39
CLIP2-201ENST00000223398 CEACAM7Q14002 265 aa17.46■□□□□ 0.39
CLIP2-201ENST00000223398 RGNQ15493 299 aa17.46■□□□□ 0.39
CLIP2-201ENST00000223398 ALG10Q5BKT4 473 aa17.46■□□□□ 0.39
CLIP2-201ENST00000223398 CTSL3PQ5NE16 218 aa17.46■□□□□ 0.39
CLIP2-201ENST00000223398 GSTO2Q9H4Y5 243 aa17.46■□□□□ 0.39
CLIP2-201ENST00000223398 SLC7A7Q9UM01 511 aa17.46■□□□□ 0.39
CLIP2-201ENST00000223398 HMGB3O15347 200 aaKnown RBP17.46■□□□□ 0.39
CLIP2-201ENST00000223398 FASLGP48023 281 aa17.46■□□□□ 0.39
CLIP2-201ENST00000223398 LRR1Q96L50 414 aa17.46■□□□□ 0.39
CLIP2-201ENST00000223398 BEX2Q9BXY8 128 aa17.46■□□□□ 0.39
CLIP2-201ENST00000223398 UBE2ZQ9H832 354 aaPredicted RBP17.46■□□□□ 0.39
CLIP2-201ENST00000223398 BEX1Q9HBH7 125 aa17.46■□□□□ 0.39
CLIP2-201ENST00000223398 CUTCQ9NTM9 273 aa17.46■□□□□ 0.39
CLIP2-201ENST00000223398 LRRC42Q9Y546 428 aa17.46■□□□□ 0.39
CLIP2-201ENST00000223398 TMX2-CTNND1H3BSU7 103 aa17.46■□□□□ 0.39
CLIP2-201ENST00000223398 CD79AP11912 226 aa17.46■□□□□ 0.39
CLIP2-201ENST00000223398 DDCP20711 480 aa17.46■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms