RNA–Protein interactions for RNA: ENST00000217402.2

CHMP4B-201, Transcript of charged multivesicular body protein 4B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP4B, Length 1,646 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4B-201ENST00000217402 MATN1P21941 496 aa25.24■■□□□ 1.63
CHMP4B-201ENST00000217402 CCL11P51671 97 aa25.24■■□□□ 1.63
CHMP4B-201ENST00000217402 ZNHIT3Q15649 155 aaPredicted RBP25.24■■□□□ 1.63
CHMP4B-201ENST00000217402 NANOGP8Q6NSW7 305 aa25.24■■□□□ 1.63
CHMP4B-201ENST00000217402 CDRT4Q8N9R6 151 aa25.24■■□□□ 1.63
CHMP4B-201ENST00000217402 SLC16A11Q8NCK7 471 aa25.24■■□□□ 1.63
CHMP4B-201ENST00000217402 NUBPLQ8TB37 319 aa25.24■■□□□ 1.63
CHMP4B-201ENST00000217402 ADIPOR1Q96A54 375 aa25.24■■□□□ 1.63
CHMP4B-201ENST00000217402 NANOGQ9H9S0 305 aa25.24■■□□□ 1.63
CHMP4B-201ENST00000217402 ZMIZ1Q9ULJ6 1067 aa25.24■■□□□ 1.63
CHMP4B-201ENST00000217402 TMEM200CA6NKL6 621 aa25.23■■□□□ 1.63
CHMP4B-201ENST00000217402 WWP2O00308 870 aa25.23■■□□□ 1.63
CHMP4B-201ENST00000217402 CRATP43155 626 aa25.23■■□□□ 1.63
CHMP4B-201ENST00000217402 RABL3Q5HYI8 236 aa25.23■■□□□ 1.63
CHMP4B-201ENST00000217402 IRAK1BP1Q5VVH5 260 aa25.23■■□□□ 1.63
CHMP4B-201ENST00000217402 B3GNTL1Q67FW5 361 aaPredicted RBP25.23■■□□□ 1.63
CHMP4B-201ENST00000217402 NPSR1Q6W5P4 371 aa25.23■■□□□ 1.63
CHMP4B-201ENST00000217402 HACD2Q6Y1H2 254 aa25.23■■□□□ 1.63
CHMP4B-201ENST00000217402 SLC5A8Q8N695 610 aa25.23■■□□□ 1.63
CHMP4B-201ENST00000217402 LMF2Q9BU23 707 aaKnown RBP25.23■■□□□ 1.63
CHMP4B-201ENST00000217402 THUMPD3Q9BV44 507 aaKnown RBP25.23■■□□□ 1.63
CHMP4B-201ENST00000217402 NXF5Q9H1B4 397 aaKnown RBP25.23■■□□□ 1.63
CHMP4B-201ENST00000217402 OR51I1Q9H343 314 aa25.23■■□□□ 1.63
CHMP4B-201ENST00000217402 B2RBV5 119 aa25.23■■□□□ 1.63
CHMP4B-201ENST00000217402 EBAG9O00559 213 aa25.23■■□□□ 1.63
CHMP4B-201ENST00000217402 MAN1A2O60476 641 aa25.23■■□□□ 1.63
CHMP4B-201ENST00000217402 KRT16P08779 473 aa25.23■■□□□ 1.63
CHMP4B-201ENST00000217402 NR0B1P51843 470 aaKnown RBP25.23■■□□□ 1.63
CHMP4B-201ENST00000217402 MVDP53602 400 aa25.23■■□□□ 1.63
CHMP4B-201ENST00000217402 SLC25A3Q00325 362 aa25.23■■□□□ 1.63
CHMP4B-201ENST00000217402 PSG6Q00889 435 aa25.23■■□□□ 1.63
CHMP4B-201ENST00000217402 DUSP5Q16690 384 aa25.23■■□□□ 1.63
CHMP4B-201ENST00000217402 JMJD6Q6NYC1 403 aaPredicted RBP25.23■■□□□ 1.63
CHMP4B-201ENST00000217402 CDC73Q6P1J9 531 aa25.23■■□□□ 1.63
CHMP4B-201ENST00000217402 SLC44A2Q8IWA5 706 aaPredicted RBP25.23■■□□□ 1.63
CHMP4B-201ENST00000217402 HORMAD2Q8N7B1 307 aa25.23■■□□□ 1.63
CHMP4B-201ENST00000217402 OR52N2Q8NGI0 321 aa25.23■■□□□ 1.63
CHMP4B-201ENST00000217402 PSMF1Q92530 271 aa25.23■■□□□ 1.63
CHMP4B-201ENST00000217402 BTBD9Q96Q07 612 aa25.23■■□□□ 1.63
CHMP4B-201ENST00000217402 MYOTQ9UBF9 498 aa25.23■■□□□ 1.63
CHMP4B-201ENST00000217402 GPR55Q9Y2T6 319 aaPredicted RBP25.23■■□□□ 1.63
CHMP4B-201ENST00000217402 EVPLLA8MZ36 301 aa25.22■■□□□ 1.63
CHMP4B-201ENST00000217402 ALOX5P09917 674 aa25.22■■□□□ 1.63
CHMP4B-201ENST00000217402 CT45A8P0DMV1 189 aa25.22■■□□□ 1.63
CHMP4B-201ENST00000217402 CT45A9P0DMV2 189 aa25.22■■□□□ 1.63
CHMP4B-201ENST00000217402 PPIBP23284 216 aaKnown RBP25.22■■□□□ 1.63
CHMP4B-201ENST00000217402 GABRA3P34903 492 aa25.22■■□□□ 1.63
CHMP4B-201ENST00000217402 PPICP45877 212 aa25.22■■□□□ 1.63
CHMP4B-201ENST00000217402 KHKP50053 298 aa25.22■■□□□ 1.63
CHMP4B-201ENST00000217402 CT45A2Q5DJT8 189 aa25.22■■□□□ 1.63
CHMP4B-201ENST00000217402 ZCCHC12Q6PEW1 402 aa25.22■■□□□ 1.63
CHMP4B-201ENST00000217402 RINLQ6ZS11 566 aa25.22■■□□□ 1.63
CHMP4B-201ENST00000217402 ZNF441Q8N8Z8 693 aa25.22■■□□□ 1.63
CHMP4B-201ENST00000217402 GPR151Q8TDV0 419 aa25.22■■□□□ 1.63
CHMP4B-201ENST00000217402 ADAMTS15Q8TE58 950 aa25.22■■□□□ 1.63
CHMP4B-201ENST00000217402 RAB8BQ92930 207 aa25.22■■□□□ 1.63
CHMP4B-201ENST00000217402 LCORQ96JN0 433 aaPredicted RBP25.22■■□□□ 1.63
CHMP4B-201ENST00000217402 OR7D2Q96RA2 312 aa25.22■■□□□ 1.63
CHMP4B-201ENST00000217402 CDCP1Q9H5V8 836 aa25.22■■□□□ 1.63
CHMP4B-201ENST00000217402 GPR83Q9NYM4 423 aa25.22■■□□□ 1.63
CHMP4B-201ENST00000217402 ETFAP13804 333 aa25.21■■□□□ 1.63
CHMP4B-201ENST00000217402 SLC6A2P23975 617 aa25.21■■□□□ 1.63
CHMP4B-201ENST00000217402 MAN2A2P49641 1150 aa25.21■■□□□ 1.63
CHMP4B-201ENST00000217402 RGNQ15493 299 aa25.21■■□□□ 1.63
CHMP4B-201ENST00000217402 RPS19BP1Q86WX3 136 aaKnown RBP25.21■■□□□ 1.63
CHMP4B-201ENST00000217402 APLFQ8IW19 511 aaPredicted RBP25.21■■□□□ 1.63
CHMP4B-201ENST00000217402 C10orf111Q8N326 155 aa25.21■■□□□ 1.63
CHMP4B-201ENST00000217402 RBM15BQ8NDT2 890 aaKnown RBP25.21■■□□□ 1.63
CHMP4B-201ENST00000217402 APOBEC4Q8WW27 367 aaKnown RBP25.21■■□□□ 1.63
CHMP4B-201ENST00000217402 PIK3R3Q92569 461 aa25.21■■□□□ 1.63
CHMP4B-201ENST00000217402 CDS1Q92903 461 aa25.21■■□□□ 1.63
CHMP4B-201ENST00000217402 GPATCH1Q9BRR8 931 aaKnown RBP25.21■■□□□ 1.63
CHMP4B-201ENST00000217402 FRG2CA6NGY1 282 aa25.2■■□□□ 1.62
CHMP4B-201ENST00000217402 OR2J2O76002 312 aa25.2■■□□□ 1.62
CHMP4B-201ENST00000217402 OR12D1P0DN82 309 aa25.2■■□□□ 1.62
CHMP4B-201ENST00000217402 ST13P50502 369 aaKnown RBP25.2■■□□□ 1.62
CHMP4B-201ENST00000217402 PSME3P61289 254 aa25.2■■□□□ 1.62
CHMP4B-201ENST00000217402 DCAF7P61962 342 aa25.2■■□□□ 1.62
CHMP4B-201ENST00000217402 BNIP1Q12981 228 aa25.2■■□□□ 1.62
CHMP4B-201ENST00000217402 EXOSC6Q5RKV6 272 aaKnown RBP25.2■■□□□ 1.62
CHMP4B-201ENST00000217402 C8orf82Q6P1X6 216 aaPredicted RBP25.2■■□□□ 1.62
CHMP4B-201ENST00000217402 OR4N2Q8NGD1 307 aa25.2■■□□□ 1.62
CHMP4B-201ENST00000217402 OR8J3Q8NGG0 315 aa25.2■■□□□ 1.62
CHMP4B-201ENST00000217402 MIPOL1Q8TD10 442 aa25.2■■□□□ 1.62
CHMP4B-201ENST00000217402 HOXB13Q92826 284 aaPredicted RBP25.2■■□□□ 1.62
CHMP4B-201ENST00000217402 CRELD1Q96HD1 420 aa25.2■■□□□ 1.62
CHMP4B-201ENST00000217402 HOPXQ9BPY8 73 aaPredicted RBP25.2■■□□□ 1.62
CHMP4B-201ENST00000217402 RAD21L1Q9H4I0 556 aa25.2■■□□□ 1.62
CHMP4B-201ENST00000217402 CORO2BQ9UQ03 480 aa25.2■■□□□ 1.62
CHMP4B-201ENST00000217402 OR10H1Q9Y4A9 318 aa25.2■■□□□ 1.62
CHMP4B-201ENST00000217402 KCNE3Q9Y6H6 103 aa25.2■■□□□ 1.62
CHMP4B-201ENST00000217402 MED13Q9UHV7 2174 aa25.2■■□□□ 1.62
CHMP4B-201ENST00000217402 LOC400499M0QZD8 3231 aa25.2■■□□□ 1.62
CHMP4B-201ENST00000217402 NKX2-2O95096 273 aa25.19■■□□□ 1.62
CHMP4B-201ENST00000217402 DRD5P21918 477 aa25.19■■□□□ 1.62
CHMP4B-201ENST00000217402 MAP3K8P41279 467 aa25.19■■□□□ 1.62
CHMP4B-201ENST00000217402 H3F3CQ6NXT2 135 aa25.19■■□□□ 1.62
CHMP4B-201ENST00000217402 GPR155Q7Z3F1 870 aa25.19■■□□□ 1.62
CHMP4B-201ENST00000217402 PRR22Q8IZ63 422 aa25.19■■□□□ 1.62
CHMP4B-201ENST00000217402 LGI4Q8N135 537 aa25.19■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms