RNA–Protein interactions for RNA: ENST00000216211.8

UPK3A-201, Transcript of uroplakin 3A, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene UPK3A, Length 1,051 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3A-201ENST00000216211 VWA5B2Q8N398 1253 aa13.71□□□□□ -0.21
UPK3A-201ENST00000216211 SIMC1Q8NDZ2 872 aa13.71□□□□□ -0.21
UPK3A-201ENST00000216211 C17orf47Q8NEP4 570 aa13.71□□□□□ -0.21
UPK3A-201ENST00000216211 ADCY4Q8NFM4 1077 aa13.71□□□□□ -0.21
UPK3A-201ENST00000216211 TRPC4APQ8TEL6 797 aa13.71□□□□□ -0.21
UPK3A-201ENST00000216211 TM4SF18Q96CE8 201 aa13.71□□□□□ -0.21
UPK3A-201ENST00000216211 HBEGFQ99075 208 aa13.71□□□□□ -0.21
UPK3A-201ENST00000216211 ITPAQ9BY32 194 aa13.71□□□□□ -0.21
UPK3A-201ENST00000216211 PRDM14Q9GZV8 571 aa13.71□□□□□ -0.21
UPK3A-201ENST00000216211 MRPL46Q9H2W6 279 aaKnown RBP13.71□□□□□ -0.21
UPK3A-201ENST00000216211 METTL7AQ9H8H3 244 aa13.71□□□□□ -0.21
UPK3A-201ENST00000216211 DNAJB12Q9NXW2 375 aaKnown RBP13.71□□□□□ -0.21
UPK3A-201ENST00000216211 MAT2BQ9NZL9 334 aa13.71□□□□□ -0.21
UPK3A-201ENST00000216211 ZNF225Q9UK10 706 aa13.71□□□□□ -0.21
UPK3A-201ENST00000216211 SNX6Q9UNH7 406 aa13.71□□□□□ -0.21
UPK3A-201ENST00000216211 CAMK2AQ9UQM7 478 aa13.71□□□□□ -0.21
UPK3A-201ENST00000216211 C15orf41Q9Y2V0 281 aa13.71□□□□□ -0.21
UPK3A-201ENST00000216211 C2orf72A6NCS6 295 aa13.7□□□□□ -0.22
UPK3A-201ENST00000216211 DVL2O14641 736 aa13.7□□□□□ -0.22
UPK3A-201ENST00000216211 GUCY1B2O75343 617 aa13.7□□□□□ -0.22
UPK3A-201ENST00000216211 SPAG7O75391 227 aa13.7□□□□□ -0.22
UPK3A-201ENST00000216211 PPM1BO75688 479 aa13.7□□□□□ -0.22
UPK3A-201ENST00000216211 OR4F21O95013 312 aa13.7□□□□□ -0.22
UPK3A-201ENST00000216211 ATP1B1P05026 303 aa13.7□□□□□ -0.22
UPK3A-201ENST00000216211 BMP7P18075 431 aa13.7□□□□□ -0.22
UPK3A-201ENST00000216211 CEACAM8P31997 349 aaPredicted RBP13.7□□□□□ -0.22
UPK3A-201ENST00000216211 SOX18P35713 384 aa13.7□□□□□ -0.22
UPK3A-201ENST00000216211 KIR2DL3P43628 341 aa13.7□□□□□ -0.22
UPK3A-201ENST00000216211 ALDH9A1P49189 494 aa13.7□□□□□ -0.22
UPK3A-201ENST00000216211 MAP4K2Q12851 820 aa13.7□□□□□ -0.22
UPK3A-201ENST00000216211 WIPI1Q5MNZ9 446 aaPredicted RBP13.7□□□□□ -0.22
UPK3A-201ENST00000216211 TCHHL1Q5QJ38 904 aaPredicted RBP13.7□□□□□ -0.22
UPK3A-201ENST00000216211 DCST1Q5T197 706 aa13.7□□□□□ -0.22
UPK3A-201ENST00000216211 VASNQ6EMK4 673 aa13.7□□□□□ -0.22
UPK3A-201ENST00000216211 LACC1Q8IV20 430 aa13.7□□□□□ -0.22
UPK3A-201ENST00000216211 PM20D2Q8IYS1 436 aa13.7□□□□□ -0.22
UPK3A-201ENST00000216211 TMEM151AQ8N4L1 468 aa13.7□□□□□ -0.22
UPK3A-201ENST00000216211 C1orf52Q8N6N3 182 aaKnown RBP13.7□□□□□ -0.22
UPK3A-201ENST00000216211 ANKRD42Q8N9B4 389 aa13.7□□□□□ -0.22
UPK3A-201ENST00000216211 CKAP2Q8WWK9 683 aa13.7□□□□□ -0.22
UPK3A-201ENST00000216211 HGDQ93099 445 aa13.7□□□□□ -0.22
UPK3A-201ENST00000216211 KLHL29Q96CT2 875 aa13.7□□□□□ -0.22
UPK3A-201ENST00000216211 NTNG2Q96CW9 530 aa13.7□□□□□ -0.22
UPK3A-201ENST00000216211 TMEM41AQ96HV5 264 aa13.7□□□□□ -0.22
UPK3A-201ENST00000216211 NODALQ96S42 347 aa13.7□□□□□ -0.22
UPK3A-201ENST00000216211 GPATCH1Q9BRR8 931 aaKnown RBP13.7□□□□□ -0.22
UPK3A-201ENST00000216211 C1QTNF3Q9BXJ4 246 aa13.7□□□□□ -0.22
UPK3A-201ENST00000216211 UGT2B28Q9BY64 529 aa13.7□□□□□ -0.22
UPK3A-201ENST00000216211 BRF2Q9HAW0 419 aa13.7□□□□□ -0.22
UPK3A-201ENST00000216211 MKS1Q9NXB0 559 aa13.7□□□□□ -0.22
UPK3A-201ENST00000216211 ZNF639Q9UID6 485 aa13.7□□□□□ -0.22
UPK3A-201ENST00000216211 MPDZO75970 2070 aa13.69□□□□□ -0.22
UPK3A-201ENST00000216211 SYT5O00445 386 aa13.69□□□□□ -0.22
UPK3A-201ENST00000216211 TM9SF1O15321 606 aa13.69□□□□□ -0.22
UPK3A-201ENST00000216211 CTAG2O75638 210 aa13.69□□□□□ -0.22
UPK3A-201ENST00000216211 CBX7O95931 251 aa13.69□□□□□ -0.22
UPK3A-201ENST00000216211 IL2RAP01589 272 aa13.69□□□□□ -0.22
UPK3A-201ENST00000216211 CD1EP15812 388 aa13.69□□□□□ -0.22
UPK3A-201ENST00000216211 CSNK2A2P19784 350 aaPredicted RBP13.69□□□□□ -0.22
UPK3A-201ENST00000216211 PTPN6P29350 595 aa13.69□□□□□ -0.22
UPK3A-201ENST00000216211 TIMP3P35625 211 aa13.69□□□□□ -0.22
UPK3A-201ENST00000216211 ASCL1P50553 236 aa13.69□□□□□ -0.22
UPK3A-201ENST00000216211 IST1P53990 364 aa13.69□□□□□ -0.22
UPK3A-201ENST00000216211 WDR4P57081 412 aaKnown RBP13.69□□□□□ -0.22
UPK3A-201ENST00000216211 LTB4RQ15722 352 aa13.69□□□□□ -0.22
UPK3A-201ENST00000216211 TRMT12Q53H54 448 aaKnown RBP13.69□□□□□ -0.22
UPK3A-201ENST00000216211 TIGD3Q6B0B8 471 aa13.69□□□□□ -0.22
UPK3A-201ENST00000216211 POMZP3Q6PJE2 187 aa13.69□□□□□ -0.22
UPK3A-201ENST00000216211 ANGPTL8Q6UXH0 198 aa13.69□□□□□ -0.22
UPK3A-201ENST00000216211 FAM83FQ8NEG4 500 aaPredicted RBP13.69□□□□□ -0.22
UPK3A-201ENST00000216211 OR52R1Q8NGF1 315 aa13.69□□□□□ -0.22
UPK3A-201ENST00000216211 OR1J4Q8NGS1 313 aa13.69□□□□□ -0.22
UPK3A-201ENST00000216211 ACMSDQ8TDX5 336 aa13.69□□□□□ -0.22
UPK3A-201ENST00000216211 OMA1Q96E52 524 aa13.69□□□□□ -0.22
UPK3A-201ENST00000216211 APOPT1Q96IL0 206 aa13.69□□□□□ -0.22
UPK3A-201ENST00000216211 LCORQ96JN0 433 aaPredicted RBP13.69□□□□□ -0.22
UPK3A-201ENST00000216211 ZNF317Q96PQ6 595 aaPredicted RBP13.69□□□□□ -0.22
UPK3A-201ENST00000216211 TRIB1Q96RU8 372 aa13.69□□□□□ -0.22
UPK3A-201ENST00000216211 POLDIP3Q9BY77 421 aaKnown RBP13.69□□□□□ -0.22
UPK3A-201ENST00000216211 EHD3Q9NZN3 535 aa13.69□□□□□ -0.22
UPK3A-201ENST00000216211 CRIM1Q9NZV1 1036 aa13.69□□□□□ -0.22
UPK3A-201ENST00000216211 TRPS1Q9UHF7 1281 aa13.69□□□□□ -0.22
UPK3A-201ENST00000216211 CFL2Q9Y281 166 aa13.69□□□□□ -0.22
UPK3A-201ENST00000216211 PLLPQ9Y342 182 aa13.69□□□□□ -0.22
UPK3A-201ENST00000216211 ITPR3Q14573 2671 aa13.69□□□□□ -0.22
UPK3A-201ENST00000216211 MAP1AP78559 2803 aaPredicted RBP13.69□□□□□ -0.22
UPK3A-201ENST00000216211 SETD2Q9BYW2 2564 aaPredicted RBP13.69□□□□□ -0.22
UPK3A-201ENST00000216211 ICOSLGO75144 302 aa13.68□□□□□ -0.22
UPK3A-201ENST00000216211 FAM107AO95990 144 aa13.68□□□□□ -0.22
UPK3A-201ENST00000216211 PYGBP11216 843 aa13.68□□□□□ -0.22
UPK3A-201ENST00000216211 PCSK2P16519 638 aa13.68□□□□□ -0.22
UPK3A-201ENST00000216211 NAGAP17050 411 aa13.68□□□□□ -0.22
UPK3A-201ENST00000216211 PTGDSP41222 190 aa13.68□□□□□ -0.22
UPK3A-201ENST00000216211 AGFG1P52594 562 aaKnown RBP13.68□□□□□ -0.22
UPK3A-201ENST00000216211 ZNF136P52737 540 aa13.68□□□□□ -0.22
UPK3A-201ENST00000216211 SEC24CP53992 1094 aa13.68□□□□□ -0.22
UPK3A-201ENST00000216211 MRPS35P82673 323 aaKnown RBP13.68□□□□□ -0.22
UPK3A-201ENST00000216211 CLCQ05315 142 aa13.68□□□□□ -0.22
UPK3A-201ENST00000216211 PLCXD2Q0VAA5 305 aa13.68□□□□□ -0.22
UPK3A-201ENST00000216211 UNC50Q53HI1 259 aa13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 88.1 ms