RNA–Protein interactions for RNA: ENST00000162749.6

TNFRSF1A-201, Transcript of TNF receptor superfamily member 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFRSF1A, Length 2,223 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-201ENST00000162749 RECKO95980 971 aa18.39■□□□□ 0.53
TNFRSF1A-201ENST00000162749 ANKRD34CP0C6C1 535 aa18.39■□□□□ 0.53
TNFRSF1A-201ENST00000162749 THRBP10828 461 aa18.39■□□□□ 0.53
TNFRSF1A-201ENST00000162749 BTG2P78543 158 aa18.39■□□□□ 0.53
TNFRSF1A-201ENST00000162749 IGLV3-21P80748 117 aaPredicted RBP18.39■□□□□ 0.53
TNFRSF1A-201ENST00000162749 CDC73Q6P1J9 531 aa18.39■□□□□ 0.53
TNFRSF1A-201ENST00000162749 IFI44Q8TCB0 444 aa18.39■□□□□ 0.53
TNFRSF1A-201ENST00000162749 GEMIN6Q8WXD5 167 aaKnown RBP18.39■□□□□ 0.53
TNFRSF1A-201ENST00000162749 COL21A1Q96P44 957 aa18.39■□□□□ 0.53
TNFRSF1A-201ENST00000162749 ZNF607Q96SK3 696 aa18.39■□□□□ 0.53
TNFRSF1A-201ENST00000162749 OSBPL10Q9BXB5 764 aa18.39■□□□□ 0.53
TNFRSF1A-201ENST00000162749 BCL2L10Q9HD36 194 aa18.39■□□□□ 0.53
TNFRSF1A-201ENST00000162749 PRTFDC1Q9NRG1 225 aa18.39■□□□□ 0.53
TNFRSF1A-201ENST00000162749 RSL24D1Q9UHA3 163 aaKnown RBP18.39■□□□□ 0.53
TNFRSF1A-201ENST00000162749 SERTAD3Q9UJW9 196 aa18.39■□□□□ 0.53
TNFRSF1A-201ENST00000162749 CLDN4O14493 209 aa18.38■□□□□ 0.53
TNFRSF1A-201ENST00000162749 JRKO75564 520 aa18.38■□□□□ 0.53
TNFRSF1A-201ENST00000162749 CD247P20963 164 aa18.38■□□□□ 0.53
TNFRSF1A-201ENST00000162749 OR1D4P47884 311 aa18.38■□□□□ 0.53
TNFRSF1A-201ENST00000162749 PPP2R2BQ00005 443 aa18.38■□□□□ 0.53
TNFRSF1A-201ENST00000162749 STX4Q12846 297 aa18.38■□□□□ 0.53
TNFRSF1A-201ENST00000162749 OR5K1Q8NHB7 308 aa18.38■□□□□ 0.53
TNFRSF1A-201ENST00000162749 ADAMTS15Q8TE58 950 aa18.38■□□□□ 0.53
TNFRSF1A-201ENST00000162749 APOBEC4Q8WW27 367 aaKnown RBP18.38■□□□□ 0.53
TNFRSF1A-201ENST00000162749 SDCCAG3Q96C92 435 aa18.38■□□□□ 0.53
TNFRSF1A-201ENST00000162749 ADAP2Q9NPF8 381 aa18.38■□□□□ 0.53
TNFRSF1A-201ENST00000162749 THSD1Q9NS62 852 aa18.38■□□□□ 0.53
TNFRSF1A-201ENST00000162749 NDOR1Q9UHB4 597 aa18.38■□□□□ 0.53
TNFRSF1A-201ENST00000162749 IGHV5-10-1A0A0J9YXX1 117 aa18.38■□□□□ 0.53
TNFRSF1A-201ENST00000162749 DUXAA6NLW8 204 aa18.38■□□□□ 0.53
TNFRSF1A-201ENST00000162749 HYAL3O43820 417 aaPredicted RBP18.38■□□□□ 0.53
TNFRSF1A-201ENST00000162749 OR10H2O60403 315 aa18.38■□□□□ 0.53
TNFRSF1A-201ENST00000162749 HPRP00739 348 aa18.38■□□□□ 0.53
TNFRSF1A-201ENST00000162749 IFI6P09912 130 aa18.38■□□□□ 0.53
TNFRSF1A-201ENST00000162749 DAB2P98082 770 aa18.38■□□□□ 0.53
TNFRSF1A-201ENST00000162749 GNA13Q14344 377 aa18.38■□□□□ 0.53
TNFRSF1A-201ENST00000162749 ALDH16A1Q8IZ83 802 aa18.38■□□□□ 0.53
TNFRSF1A-201ENST00000162749 GPR32P1Q8NGA4 272 aa18.38■□□□□ 0.53
TNFRSF1A-201ENST00000162749 ZDHHC19Q8WVZ1 309 aaPredicted RBP18.38■□□□□ 0.53
TNFRSF1A-201ENST00000162749 SLC35A4Q96G79 324 aa18.38■□□□□ 0.53
TNFRSF1A-201ENST00000162749 NDC1Q9BTX1 674 aa18.38■□□□□ 0.53
TNFRSF1A-201ENST00000162749 SYNDIG1Q9H7V2 258 aa18.38■□□□□ 0.53
TNFRSF1A-201ENST00000162749 SEC14L3Q9UDX4 400 aa18.38■□□□□ 0.53
TNFRSF1A-201ENST00000162749 KIF26BQ2KJY2 2108 aa18.37■□□□□ 0.53
TNFRSF1A-201ENST00000162749 DPM1O60762 260 aa18.37■□□□□ 0.53
TNFRSF1A-201ENST00000162749 SERPINB7O75635 380 aa18.37■□□□□ 0.53
TNFRSF1A-201ENST00000162749 ATXN8OSP0DMR3 200 aa18.37■□□□□ 0.53
TNFRSF1A-201ENST00000162749 MAOAP21397 527 aa18.37■□□□□ 0.53
TNFRSF1A-201ENST00000162749 YAP1P46937 504 aaKnown RBP18.37■□□□□ 0.53
TNFRSF1A-201ENST00000162749 HSD17B7P56937 341 aa18.37■□□□□ 0.53
TNFRSF1A-201ENST00000162749 PUM1Q14671 1186 aaKnown RBP eCLIP18.37■□□□□ 0.53
TNFRSF1A-201ENST00000162749 EXOSC7Q15024 291 aaKnown RBP18.37■□□□□ 0.53
TNFRSF1A-201ENST00000162749 GPAT3Q53EU6 434 aa18.37■□□□□ 0.53
TNFRSF1A-201ENST00000162749 SHQ1Q6PI26 577 aaKnown RBP18.37■□□□□ 0.53
TNFRSF1A-201ENST00000162749 PRR23CQ6ZRP0 262 aa18.37■□□□□ 0.53
TNFRSF1A-201ENST00000162749 BBS10Q8TAM1 723 aa18.37■□□□□ 0.53
TNFRSF1A-201ENST00000162749 SLC9A6Q92581 669 aa18.37■□□□□ 0.53
TNFRSF1A-201ENST00000162749 ALOXE3Q9BYJ1 711 aa18.37■□□□□ 0.53
TNFRSF1A-201ENST00000162749 TOR3AQ9H497 397 aa18.37■□□□□ 0.53
TNFRSF1A-201ENST00000162749 CXorf21Q9HAI6 301 aa18.37■□□□□ 0.53
TNFRSF1A-201ENST00000162749 FANCEQ9HB96 536 aa18.37■□□□□ 0.53
TNFRSF1A-201ENST00000162749 LIPT1Q9Y234 373 aa18.37■□□□□ 0.53
TNFRSF1A-201ENST00000162749 PRKACGP22612 351 aa18.37■□□□□ 0.53
TNFRSF1A-201ENST00000162749 ELK4P28324 431 aa18.37■□□□□ 0.53
TNFRSF1A-201ENST00000162749 SH3BGRP55822 239 aaPredicted RBP18.37■□□□□ 0.53
TNFRSF1A-201ENST00000162749 PRAMEF8Q5VWM4 474 aa18.37■□□□□ 0.53
TNFRSF1A-201ENST00000162749 PRAMEF7Q5VXH5 474 aa18.37■□□□□ 0.53
TNFRSF1A-201ENST00000162749 HEPHL1Q6MZM0 1159 aa18.37■□□□□ 0.53
TNFRSF1A-201ENST00000162749 KRT73Q86Y46 540 aa18.37■□□□□ 0.53
TNFRSF1A-201ENST00000162749 VWA5B2Q8N398 1253 aa18.37■□□□□ 0.53
TNFRSF1A-201ENST00000162749 RNF217Q8TC41 542 aa18.37■□□□□ 0.53
TNFRSF1A-201ENST00000162749 RASSF5Q8WWW0 418 aa18.37■□□□□ 0.53
TNFRSF1A-201ENST00000162749 RBM18Q96H35 190 aaKnown RBP18.37■□□□□ 0.53
TNFRSF1A-201ENST00000162749 ZNF300Q96RE9 604 aaPredicted RBP18.37■□□□□ 0.53
TNFRSF1A-201ENST00000162749 MBOAT4Q96T53 435 aa18.37■□□□□ 0.53
TNFRSF1A-201ENST00000162749 BTBD2Q9BX70 525 aa18.37■□□□□ 0.53
TNFRSF1A-201ENST00000162749 AMBRA1Q9C0C7 1298 aa18.37■□□□□ 0.53
TNFRSF1A-201ENST00000162749 SLC38A1Q9H2H9 487 aa18.37■□□□□ 0.53
TNFRSF1A-201ENST00000162749 GIN1Q9NXP7 522 aa18.37■□□□□ 0.53
TNFRSF1A-201ENST00000162749 USE1Q9NZ43 259 aa18.37■□□□□ 0.53
TNFRSF1A-201ENST00000162749 KCNJ5P48544 419 aa18.36■□□□□ 0.53
TNFRSF1A-201ENST00000162749 DYNC1I2Q13409 638 aaKnown RBP18.36■□□□□ 0.53
TNFRSF1A-201ENST00000162749 LAPTM4AQ15012 233 aa18.36■□□□□ 0.53
TNFRSF1A-201ENST00000162749 DUSP5Q16690 384 aa18.36■□□□□ 0.53
TNFRSF1A-201ENST00000162749 ATAD3BQ5T9A4 648 aa18.36■□□□□ 0.53
TNFRSF1A-201ENST00000162749 ZC3H14Q6PJT7 736 aaKnown RBP18.36■□□□□ 0.53
TNFRSF1A-201ENST00000162749 C16orf62Q7Z3J2 963 aa18.36■□□□□ 0.53
TNFRSF1A-201ENST00000162749 GALNT12Q8IXK2 581 aa18.36■□□□□ 0.53
TNFRSF1A-201ENST00000162749 CDS1Q92903 461 aa18.36■□□□□ 0.53
TNFRSF1A-201ENST00000162749 LOXL4Q96JB6 756 aa18.36■□□□□ 0.53
TNFRSF1A-201ENST00000162749 TRNT1Q96Q11 434 aaKnown RBP18.36■□□□□ 0.53
TNFRSF1A-201ENST00000162749 BARD1Q99728 777 aaKnown RBP18.36■□□□□ 0.53
TNFRSF1A-201ENST00000162749 YTHDF1Q9BYJ9 559 aaKnown RBP18.36■□□□□ 0.53
TNFRSF1A-201ENST00000162749 REEP1Q9H902 201 aa18.36■□□□□ 0.53
TNFRSF1A-201ENST00000162749 LANCL2Q9NS86 450 aa18.36■□□□□ 0.53
TNFRSF1A-201ENST00000162749 SAMHD1Q9Y3Z3 626 aaKnown RBP18.36■□□□□ 0.53
TNFRSF1A-201ENST00000162749 DSPPQ9NZW4 1301 aa18.36■□□□□ 0.53
TNFRSF1A-201ENST00000162749 A0A0G2JPF8 293 aa18.35■□□□□ 0.53
TNFRSF1A-201ENST00000162749 HNRNPCL2B2RXH8 293 aa18.35■□□□□ 0.53
TNFRSF1A-201ENST00000162749 HNRNPCL3B7ZW38 293 aa18.35■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms