RNA–Protein interactions for RNA: ENST00000006275.8

TRAPPC6A-201, Transcript of trafficking protein particle complex 6A, humanhuman

TSL 1 (best) BASIC

Gene TRAPPC6A, Length 805 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC6A-201ENST00000006275 CLPSP04118 112 aa17.4■□□□□ 0.38
TRAPPC6A-201ENST00000006275 DDCP20711 480 aa17.4■□□□□ 0.38
TRAPPC6A-201ENST00000006275 NR0B1P51843 470 aaKnown RBP17.4■□□□□ 0.38
TRAPPC6A-201ENST00000006275 RPL38P63173 70 aaKnown RBP17.4■□□□□ 0.38
TRAPPC6A-201ENST00000006275 ADAM8P78325 824 aa17.4■□□□□ 0.38
TRAPPC6A-201ENST00000006275 DUSP2Q05923 314 aa17.4■□□□□ 0.38
TRAPPC6A-201ENST00000006275 FUT7Q11130 342 aa17.4■□□□□ 0.38
TRAPPC6A-201ENST00000006275 EBPQ15125 230 aaKnown RBP17.4■□□□□ 0.38
TRAPPC6A-201ENST00000006275 MPEG1Q2M385 716 aa17.4■□□□□ 0.38
TRAPPC6A-201ENST00000006275 PRICKLE4Q2TBC4 344 aa17.4■□□□□ 0.38
TRAPPC6A-201ENST00000006275 GXYLT1Q4G148 440 aa17.4■□□□□ 0.38
TRAPPC6A-201ENST00000006275 PIGGQ5H8A4 983 aa17.4■□□□□ 0.38
TRAPPC6A-201ENST00000006275 HHATQ5VTY9 493 aa17.4■□□□□ 0.38
TRAPPC6A-201ENST00000006275 FAM71E1Q6IPT2 247 aa17.4■□□□□ 0.38
TRAPPC6A-201ENST00000006275 ARSKQ6UWY0 536 aa17.4■□□□□ 0.38
TRAPPC6A-201ENST00000006275 Q71RC1 249 aaPredicted RBP17.4■□□□□ 0.38
TRAPPC6A-201ENST00000006275 BIVMQ86UB2 503 aa17.4■□□□□ 0.38
TRAPPC6A-201ENST00000006275 CCDC116Q8IYX3 515 aa17.4■□□□□ 0.38
TRAPPC6A-201ENST00000006275 VWA5B2Q8N398 1253 aa17.4■□□□□ 0.38
TRAPPC6A-201ENST00000006275 OR5M9Q8NGP3 310 aa17.4■□□□□ 0.38
TRAPPC6A-201ENST00000006275 SLC22A8Q8TCC7 542 aa17.4■□□□□ 0.38
TRAPPC6A-201ENST00000006275 ZNF681Q96N22 645 aa17.4■□□□□ 0.38
TRAPPC6A-201ENST00000006275 WWTR1Q9GZV5 400 aa17.4■□□□□ 0.38
TRAPPC6A-201ENST00000006275 OR10A5Q9H207 317 aa17.4■□□□□ 0.38
TRAPPC6A-201ENST00000006275 MYNNQ9NPC7 610 aa17.4■□□□□ 0.38
TRAPPC6A-201ENST00000006275 TIMMDC1Q9NPL8 285 aa17.4■□□□□ 0.38
TRAPPC6A-201ENST00000006275 PNPLA3Q9NST1 481 aa17.4■□□□□ 0.38
TRAPPC6A-201ENST00000006275 MAT2BQ9NZL9 334 aa17.4■□□□□ 0.38
TRAPPC6A-201ENST00000006275 EHD3Q9NZN3 535 aa17.4■□□□□ 0.38
TRAPPC6A-201ENST00000006275 WBP11Q9Y2W2 641 aaKnown RBP17.4■□□□□ 0.38
TRAPPC6A-201ENST00000006275 PHF3Q92576 2039 aaKnown RBP17.4■□□□□ 0.38
TRAPPC6A-201ENST00000006275 TMEM120BA0PK00 339 aa17.39■□□□□ 0.37
TRAPPC6A-201ENST00000006275 TMEM114B3SHH9 223 aa17.39■□□□□ 0.37
TRAPPC6A-201ENST00000006275 ITM2AO43736 263 aa17.39■□□□□ 0.37
TRAPPC6A-201ENST00000006275 LYPLA1O75608 230 aaPredicted RBP17.39■□□□□ 0.37
TRAPPC6A-201ENST00000006275 ACVR2AP27037 513 aa17.39■□□□□ 0.37
TRAPPC6A-201ENST00000006275 ZFP36L2P47974 494 aaKnown RBP17.39■□□□□ 0.37
TRAPPC6A-201ENST00000006275 ABCE1P61221 599 aaKnown RBP17.39■□□□□ 0.37
TRAPPC6A-201ENST00000006275 MAGOHP61326 146 aaKnown RBP17.39■□□□□ 0.37
TRAPPC6A-201ENST00000006275 MAP4K2Q12851 820 aa17.39■□□□□ 0.37
TRAPPC6A-201ENST00000006275 GALNTL6Q49A17 601 aa17.39■□□□□ 0.37
TRAPPC6A-201ENST00000006275 HLA-DQA1Q5Y7H0 255 aa17.39■□□□□ 0.37
TRAPPC6A-201ENST00000006275 FAM111BQ6SJ93 734 aa17.39■□□□□ 0.37
TRAPPC6A-201ENST00000006275 OPN5Q6U736 354 aa17.39■□□□□ 0.37
TRAPPC6A-201ENST00000006275 MDGA2Q7Z553 956 aa17.39■□□□□ 0.37
TRAPPC6A-201ENST00000006275 ADCY4Q8NFM4 1077 aa17.39■□□□□ 0.37
TRAPPC6A-201ENST00000006275 OR7G1Q8NGA0 311 aa17.39■□□□□ 0.37
TRAPPC6A-201ENST00000006275 GOT1L1Q8NHS2 421 aaPredicted RBP17.39■□□□□ 0.37
TRAPPC6A-201ENST00000006275 MIEF1Q9NQG6 463 aa17.39■□□□□ 0.37
TRAPPC6A-201ENST00000006275 SLC35C2Q9NQQ7 365 aa17.39■□□□□ 0.37
TRAPPC6A-201ENST00000006275 RASSF1Q9NS23 344 aa17.39■□□□□ 0.37
TRAPPC6A-201ENST00000006275 C2orf92A0A1B0GVN3 265 aa17.38■□□□□ 0.37
TRAPPC6A-201ENST00000006275 FIGNL2A6NMB9 653 aa17.38■□□□□ 0.37
TRAPPC6A-201ENST00000006275 FAM166BA8MTA8 275 aa17.38■□□□□ 0.37
TRAPPC6A-201ENST00000006275 LSM1O15116 133 aaKnown RBP17.38■□□□□ 0.37
TRAPPC6A-201ENST00000006275 ZNF354AO60765 605 aaPredicted RBP17.38■□□□□ 0.37
TRAPPC6A-201ENST00000006275 SKAP2O75563 359 aaPredicted RBP17.38■□□□□ 0.37
TRAPPC6A-201ENST00000006275 BGNP21810 368 aa17.38■□□□□ 0.37
TRAPPC6A-201ENST00000006275 GRK2P25098 689 aa17.38■□□□□ 0.37
TRAPPC6A-201ENST00000006275 PLGLB1Q02325 96 aa17.38■□□□□ 0.37
TRAPPC6A-201ENST00000006275 SNTB1Q13884 538 aaKnown RBP17.38■□□□□ 0.37
TRAPPC6A-201ENST00000006275 LTB4RQ15722 352 aa17.38■□□□□ 0.37
TRAPPC6A-201ENST00000006275 RFTN2Q52LD8 501 aaPredicted RBP17.38■□□□□ 0.37
TRAPPC6A-201ENST00000006275 ZNF585AQ6P3V2 769 aa17.38■□□□□ 0.37
TRAPPC6A-201ENST00000006275 B3GNT6Q6ZMB0 384 aa17.38■□□□□ 0.37
TRAPPC6A-201ENST00000006275 IKBIPQ70UQ0 350 aa17.38■□□□□ 0.37
TRAPPC6A-201ENST00000006275 SLC15A4Q8N697 577 aa17.38■□□□□ 0.37
TRAPPC6A-201ENST00000006275 ZNF615Q8N8J6 731 aa17.38■□□□□ 0.37
TRAPPC6A-201ENST00000006275 PUM2Q8TB72 1066 aaKnown RBP eCLIP17.38■□□□□ 0.37
TRAPPC6A-201ENST00000006275 TLCD1Q96CP7 247 aa17.38■□□□□ 0.37
TRAPPC6A-201ENST00000006275 EGLN2Q96KS0 407 aa17.38■□□□□ 0.37
TRAPPC6A-201ENST00000006275 PPP3R2Q96LZ3 170 aa17.38■□□□□ 0.37
TRAPPC6A-201ENST00000006275 BBS4Q96RK4 519 aa17.38■□□□□ 0.37
TRAPPC6A-201ENST00000006275 TTYH2Q9BSA4 534 aa17.38■□□□□ 0.37
TRAPPC6A-201ENST00000006275 ZNF395Q9H8N7 513 aaPredicted RBP17.38■□□□□ 0.37
TRAPPC6A-201ENST00000006275 ARGLU1Q9NWB6 273 aaPredicted RBP17.38■□□□□ 0.37
TRAPPC6A-201ENST00000006275 BCAP29Q9UHQ4 241 aa17.38■□□□□ 0.37
TRAPPC6A-201ENST00000006275 TMED5Q9Y3A6 229 aa17.38■□□□□ 0.37
TRAPPC6A-201ENST00000006275 ACOT7O00154 380 aa17.37■□□□□ 0.37
TRAPPC6A-201ENST00000006275 S1PR1P21453 382 aa17.37■□□□□ 0.37
TRAPPC6A-201ENST00000006275 TACR1P25103 407 aa17.37■□□□□ 0.37
TRAPPC6A-201ENST00000006275 KIR2DL3P43628 341 aa17.37■□□□□ 0.37
TRAPPC6A-201ENST00000006275 SLC1A6P48664 564 aa17.37■□□□□ 0.37
TRAPPC6A-201ENST00000006275 PPIAP62937 165 aaKnown RBP17.37■□□□□ 0.37
TRAPPC6A-201ENST00000006275 MGAT2Q10469 447 aa17.37■□□□□ 0.37
TRAPPC6A-201ENST00000006275 STX3Q13277 289 aa17.37■□□□□ 0.37
TRAPPC6A-201ENST00000006275 EXOSC7Q15024 291 aaKnown RBP17.37■□□□□ 0.37
TRAPPC6A-201ENST00000006275 SLC25A35Q3KQZ1 300 aa17.37■□□□□ 0.37
TRAPPC6A-201ENST00000006275 RTL4Q6ZR62 310 aa17.37■□□□□ 0.37
TRAPPC6A-201ENST00000006275 TAGAPQ8N103 731 aa17.37■□□□□ 0.37
TRAPPC6A-201ENST00000006275 PSD4Q8NDX1 1056 aa17.37■□□□□ 0.37
TRAPPC6A-201ENST00000006275 MGARPQ8TDB4 240 aa17.37■□□□□ 0.37
TRAPPC6A-201ENST00000006275 FCRL1Q96LA6 429 aa17.37■□□□□ 0.37
TRAPPC6A-201ENST00000006275 CCT7Q99832 543 aa17.37■□□□□ 0.37
TRAPPC6A-201ENST00000006275 SMR3AQ99954 134 aa17.37■□□□□ 0.37
TRAPPC6A-201ENST00000006275 RYDENQ9NUL5 291 aaKnown RBP17.37■□□□□ 0.37
TRAPPC6A-201ENST00000006275 ZNF639Q9UID6 485 aa17.37■□□□□ 0.37
TRAPPC6A-201ENST00000006275 CFL2Q9Y281 166 aa17.37■□□□□ 0.37
TRAPPC6A-201ENST00000006275 CSPG4Q6UVK1 2322 aa17.37■□□□□ 0.37
TRAPPC6A-201ENST00000006275 FN1P02751 2386 aaKnown RBP17.36■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms