RNA–Protein interactions for RNA: ENST00000641573.1

PHGDH-221, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 1,180 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-221ENST00000641573 THUMPD1Q9NXG2 353 aaKnown RBP12.26□□□□□ -0.45
PHGDH-221ENST00000641573 NTMQ9P121 344 aa12.26□□□□□ -0.45
PHGDH-221ENST00000641573 PTGFRNQ9P2B2 879 aa12.26□□□□□ -0.45
PHGDH-221ENST00000641573 RARRES3Q9UL19 164 aa12.26□□□□□ -0.45
PHGDH-221ENST00000641573 MGAQ8IWI9 3026 aa12.26□□□□□ -0.45
PHGDH-221ENST00000641573 COL6A6A6NMZ7 2263 aa12.25□□□□□ -0.45
PHGDH-221ENST00000641573 GIMAP1-GIMAP5A0A087WTJ2 511 aa12.25□□□□□ -0.45
PHGDH-221ENST00000641573 A0A1B0GX78 115 aa12.25□□□□□ -0.45
PHGDH-221ENST00000641573 B8ZZF3 427 aa12.25□□□□□ -0.45
PHGDH-221ENST00000641573 PYCARD-AS1I3L0S3 204 aa12.25□□□□□ -0.45
PHGDH-221ENST00000641573 OR10H2O60403 315 aa12.25□□□□□ -0.45
PHGDH-221ENST00000641573 GCM2O75603 506 aaPredicted RBP12.25□□□□□ -0.45
PHGDH-221ENST00000641573 CDC123O75794 336 aaPredicted RBP12.25□□□□□ -0.45
PHGDH-221ENST00000641573 SLITRK5O94991 958 aa12.25□□□□□ -0.45
PHGDH-221ENST00000641573 WISP1O95388 367 aa12.25□□□□□ -0.45
PHGDH-221ENST00000641573 HMGN2P05204 90 aaKnown RBP12.25□□□□□ -0.45
PHGDH-221ENST00000641573 TFPTP0C1Z6 253 aa12.25□□□□□ -0.45
PHGDH-221ENST00000641573 FBLP22087 321 aaKnown RBP12.25□□□□□ -0.45
PHGDH-221ENST00000641573 PEX2P28328 305 aa12.25□□□□□ -0.45
PHGDH-221ENST00000641573 HSD17B7P56937 341 aa12.25□□□□□ -0.45
PHGDH-221ENST00000641573 BTG2P78543 158 aa12.25□□□□□ -0.45
PHGDH-221ENST00000641573 IGLV3-21P80748 117 aaPredicted RBP12.25□□□□□ -0.45
PHGDH-221ENST00000641573 TXNL4AP83876 142 aaKnown RBP12.25□□□□□ -0.45
PHGDH-221ENST00000641573 MGAT2Q10469 447 aa12.25□□□□□ -0.45
PHGDH-221ENST00000641573 STX4Q12846 297 aa12.25□□□□□ -0.45
PHGDH-221ENST00000641573 TRA2AQ13595 282 aaKnown RBP eCLIP12.25□□□□□ -0.45
PHGDH-221ENST00000641573 DSG2Q14126 1118 aa12.25□□□□□ -0.45
PHGDH-221ENST00000641573 RTP5Q14D33 572 aa12.25□□□□□ -0.45
PHGDH-221ENST00000641573 CYBRD1Q53TN4 286 aa12.25□□□□□ -0.45
PHGDH-221ENST00000641573 OGFRL1Q5TC84 451 aaPredicted RBP12.25□□□□□ -0.45
PHGDH-221ENST00000641573 FHL5Q5TD97 284 aa12.25□□□□□ -0.45
PHGDH-221ENST00000641573 C1orf189Q5VU69 101 aa12.25□□□□□ -0.45
PHGDH-221ENST00000641573 BROXQ5VW32 411 aa12.25□□□□□ -0.45
PHGDH-221ENST00000641573 REEP3Q6NUK4 255 aa12.25□□□□□ -0.45
PHGDH-221ENST00000641573 PCSK4Q6UW60 755 aa12.25□□□□□ -0.45
PHGDH-221ENST00000641573 EIF3MQ7L2H7 374 aaKnown RBP12.25□□□□□ -0.45
PHGDH-221ENST00000641573 SPACA3Q8IXA5 215 aa12.25□□□□□ -0.45
PHGDH-221ENST00000641573 OR2L13Q8N349 312 aa12.25□□□□□ -0.45
PHGDH-221ENST00000641573 OR5D16Q8NGK9 328 aa12.25□□□□□ -0.45
PHGDH-221ENST00000641573 OR10Q1Q8NGQ4 319 aa12.25□□□□□ -0.45
PHGDH-221ENST00000641573 MIPOL1Q8TD10 442 aa12.25□□□□□ -0.45
PHGDH-221ENST00000641573 ZNF675Q8TD23 568 aa12.25□□□□□ -0.45
PHGDH-221ENST00000641573 DOK4Q8TEW6 326 aa12.25□□□□□ -0.45
PHGDH-221ENST00000641573 SLC38A5Q8WUX1 472 aa12.25□□□□□ -0.45
PHGDH-221ENST00000641573 GIMAP5Q96F15 307 aa12.25□□□□□ -0.45
PHGDH-221ENST00000641573 TMEM19Q96HH6 336 aa12.25□□□□□ -0.45
PHGDH-221ENST00000641573 KLHL4Q9C0H6 718 aa12.25□□□□□ -0.45
PHGDH-221ENST00000641573 SEMA6AQ9H2E6 1030 aa12.25□□□□□ -0.45
PHGDH-221ENST00000641573 VCX3BQ9H321 246 aa12.25□□□□□ -0.45
PHGDH-221ENST00000641573 MAGIXQ9H6Y5 334 aa12.25□□□□□ -0.45
PHGDH-221ENST00000641573 YY1AP1Q9H869 796 aa12.25□□□□□ -0.45
PHGDH-221ENST00000641573 ZNF304Q9HCX3 659 aa12.25□□□□□ -0.45
PHGDH-221ENST00000641573 SIDT1Q9NXL6 827 aaKnown RBP12.25□□□□□ -0.45
PHGDH-221ENST00000641573 MAT2BQ9NZL9 334 aa12.25□□□□□ -0.45
PHGDH-221ENST00000641573 C19orf53Q9UNZ5 99 aaPredicted RBP12.25□□□□□ -0.45
PHGDH-221ENST00000641573 SRPK3Q9UPE1 567 aa12.25□□□□□ -0.45
PHGDH-221ENST00000641573 NUP214P35658 2090 aaPredicted RBP12.25□□□□□ -0.45
PHGDH-221ENST00000641573 PIEZO2Q9H5I5 2752 aa12.24□□□□□ -0.45
PHGDH-221ENST00000641573 A0A087WV62 115 aa12.24□□□□□ -0.45
PHGDH-221ENST00000641573 TMEM247A6NEH6 219 aa12.24□□□□□ -0.45
PHGDH-221ENST00000641573 TGFBR3LH3BV60 316 aa12.24□□□□□ -0.45
PHGDH-221ENST00000641573 SLC28A2O43868 658 aa12.24□□□□□ -0.45
PHGDH-221ENST00000641573 PEX1O43933 1283 aa12.24□□□□□ -0.45
PHGDH-221ENST00000641573 JRKO75564 520 aa12.24□□□□□ -0.45
PHGDH-221ENST00000641573 BMP10O95393 424 aa12.24□□□□□ -0.45
PHGDH-221ENST00000641573 MT-ND1P03886 318 aa12.24□□□□□ -0.45
PHGDH-221ENST00000641573 BCHEP06276 602 aa12.24□□□□□ -0.45
PHGDH-221ENST00000641573 IFI6P09912 130 aa12.24□□□□□ -0.45
PHGDH-221ENST00000641573 HOXB6P17509 224 aaKnown RBP12.24□□□□□ -0.45
PHGDH-221ENST00000641573 CSTF2P33240 577 aaKnown RBP eCLIP12.24□□□□□ -0.45
PHGDH-221ENST00000641573 SOX18P35713 384 aa12.24□□□□□ -0.45
PHGDH-221ENST00000641573 UCNP55089 124 aa12.24□□□□□ -0.45
PHGDH-221ENST00000641573 RP1P56715 2156 aa12.24□□□□□ -0.45
PHGDH-221ENST00000641573 CLDN6P56747 220 aa12.24□□□□□ -0.45
PHGDH-221ENST00000641573 PCBP3P57721 371 aaKnown RBP12.24□□□□□ -0.45
PHGDH-221ENST00000641573 TMPRSS3P57727 454 aa12.24□□□□□ -0.45
PHGDH-221ENST00000641573 ZFP36L1Q07352 338 aaKnown RBP12.24□□□□□ -0.45
PHGDH-221ENST00000641573 MYBPC3Q14896 1274 aa12.24□□□□□ -0.45
PHGDH-221ENST00000641573 MAPK11Q15759 364 aa12.24□□□□□ -0.45
PHGDH-221ENST00000641573 ATP6AP1Q15904 470 aa12.24□□□□□ -0.45
PHGDH-221ENST00000641573 LRRC36Q1X8D7 754 aa12.24□□□□□ -0.45
PHGDH-221ENST00000641573 PRICKLE4Q2TBC4 344 aa12.24□□□□□ -0.45
PHGDH-221ENST00000641573 TRMT12Q53H54 448 aaKnown RBP12.24□□□□□ -0.45
PHGDH-221ENST00000641573 ARHGAP40Q5TG30 622 aa12.24□□□□□ -0.45
PHGDH-221ENST00000641573 HES3Q5TGS1 186 aa12.24□□□□□ -0.45
PHGDH-221ENST00000641573 DGAT2L6Q6ZPD8 337 aa12.24□□□□□ -0.45
PHGDH-221ENST00000641573 MED25Q71SY5 747 aa12.24□□□□□ -0.45
PHGDH-221ENST00000641573 B3GNT8Q7Z7M8 397 aa12.24□□□□□ -0.45
PHGDH-221ENST00000641573 PATL1Q86TB9 770 aaKnown RBP12.24□□□□□ -0.45
PHGDH-221ENST00000641573 SLC44A2Q8IWA5 706 aaPredicted RBP12.24□□□□□ -0.45
PHGDH-221ENST00000641573 XAGE5Q8WWM1 108 aa12.24□□□□□ -0.45
PHGDH-221ENST00000641573 OTUB1Q96FW1 271 aaPredicted RBP12.24□□□□□ -0.45
PHGDH-221ENST00000641573 MS4A4EQ96PG1 132 aa12.24□□□□□ -0.45
PHGDH-221ENST00000641573 OR1F2PQ96R84 312 aa12.24□□□□□ -0.45
PHGDH-221ENST00000641573 OR7D2Q96RA2 312 aa12.24□□□□□ -0.45
PHGDH-221ENST00000641573 ACTRT3Q9BYD9 372 aa12.24□□□□□ -0.45
PHGDH-221ENST00000641573 ALOXE3Q9BYJ1 711 aa12.24□□□□□ -0.45
PHGDH-221ENST00000641573 SLC7A5P2Q9GIP4 190 aa12.24□□□□□ -0.45
PHGDH-221ENST00000641573 EQTNQ9NQ60 294 aa12.24□□□□□ -0.45
PHGDH-221ENST00000641573 AGPAT4Q9NRZ5 378 aa12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms