RNA–Protein interactions for RNA: ENST00000641455.1

PHGDH-217, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 312 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-217ENST00000641455 SERPINB12Q96P63 405 aa7.05□□□□□ -1.28
PHGDH-217ENST00000641455 SORBS1Q9BX66 1292 aaKnown RBP7.05□□□□□ -1.28
PHGDH-217ENST00000641455 PRRG4Q9BZD6 226 aa7.05□□□□□ -1.28
PHGDH-217ENST00000641455 NT5DC2Q9H857 520 aa7.05□□□□□ -1.28
PHGDH-217ENST00000641455 L2HGDHQ9H9P8 463 aa7.05□□□□□ -1.28
PHGDH-217ENST00000641455 EML4Q9HC35 981 aaKnown RBP7.05□□□□□ -1.28
PHGDH-217ENST00000641455 EHD3Q9NZN3 535 aa7.05□□□□□ -1.28
PHGDH-217ENST00000641455 EXO1Q9UQ84 846 aaKnown RBP7.05□□□□□ -1.28
PHGDH-217ENST00000641455 EMC9Q9Y3B6 208 aa7.05□□□□□ -1.28
PHGDH-217ENST00000641455 MGAM2Q2M2H8 2515 aa7.04□□□□□ -1.28
PHGDH-217ENST00000641455 MEGF8Q7Z7M0 2845 aa7.04□□□□□ -1.28
PHGDH-217ENST00000641455 MAGEB16A2A368 324 aa7.04□□□□□ -1.28
PHGDH-217ENST00000641455 SLC35F4A4IF30 521 aa7.04□□□□□ -1.28
PHGDH-217ENST00000641455 NCF1BA6NI72 391 aaPredicted RBP7.04□□□□□ -1.28
PHGDH-217ENST00000641455 GLOD5A6NK44 160 aa7.04□□□□□ -1.28
PHGDH-217ENST00000641455 SDR42E2A6NKP2 422 aa7.04□□□□□ -1.28
PHGDH-217ENST00000641455 NCF1CA8MVU1 366 aaPredicted RBP7.04□□□□□ -1.28
PHGDH-217ENST00000641455 EFCAB8A8MWE9 144 aa7.04□□□□□ -1.28
PHGDH-217ENST00000641455 GOLGA8MH3BSY2 632 aa7.04□□□□□ -1.28
PHGDH-217ENST00000641455 CLPSP04118 112 aa7.04□□□□□ -1.28
PHGDH-217ENST00000641455 PYGBP11216 843 aa7.04□□□□□ -1.28
PHGDH-217ENST00000641455 PCNAP12004 261 aa7.04□□□□□ -1.28
PHGDH-217ENST00000641455 PEPDP12955 493 aa7.04□□□□□ -1.28
PHGDH-217ENST00000641455 NCF1P14598 390 aaPredicted RBP7.04□□□□□ -1.28
PHGDH-217ENST00000641455 BUD31P41223 144 aaPredicted RBP7.04□□□□□ -1.28
PHGDH-217ENST00000641455 GZMKP49863 264 aa7.04□□□□□ -1.28
PHGDH-217ENST00000641455 RAP1GDS1P52306 607 aa7.04□□□□□ -1.28
PHGDH-217ENST00000641455 EEFSECP57772 596 aaKnown RBP7.04□□□□□ -1.28
PHGDH-217ENST00000641455 LSM11P83369 360 aaKnown RBP eCLIP7.04□□□□□ -1.28
PHGDH-217ENST00000641455 PLCXD2Q0VAA5 305 aa7.04□□□□□ -1.28
PHGDH-217ENST00000641455 DOC2AQ14183 400 aa7.04□□□□□ -1.28
PHGDH-217ENST00000641455 PON3Q15166 354 aa7.04□□□□□ -1.28
PHGDH-217ENST00000641455 TRIP13Q15645 432 aaPredicted RBP7.04□□□□□ -1.28
PHGDH-217ENST00000641455 SGCBQ16585 318 aa7.04□□□□□ -1.28
PHGDH-217ENST00000641455 HIST2H2ACQ16777 129 aaPredicted RBP7.04□□□□□ -1.28
PHGDH-217ENST00000641455 PGGHGQ32M88 737 aa7.04□□□□□ -1.28
PHGDH-217ENST00000641455 ZNF672Q499Z4 452 aaPredicted RBP7.04□□□□□ -1.28
PHGDH-217ENST00000641455 RAET1LQ5VY80 246 aa7.04□□□□□ -1.28
PHGDH-217ENST00000641455 ARMC3Q5W041 872 aa7.04□□□□□ -1.28
PHGDH-217ENST00000641455 HIST2H2AA3Q6FI13 130 aa7.04□□□□□ -1.28
PHGDH-217ENST00000641455 OR5M10Q6IEU7 315 aa7.04□□□□□ -1.28
PHGDH-217ENST00000641455 FAM214BQ7L5A3 538 aa7.04□□□□□ -1.28
PHGDH-217ENST00000641455 NUP54Q7Z3B4 507 aa7.04□□□□□ -1.28
PHGDH-217ENST00000641455 UBE3DQ7Z6J8 389 aa7.04□□□□□ -1.28
PHGDH-217ENST00000641455 GPR180Q86V85 440 aa7.04□□□□□ -1.28
PHGDH-217ENST00000641455 GPSM1Q86YR5 675 aa7.04□□□□□ -1.28
PHGDH-217ENST00000641455 PLCZ1Q86YW0 608 aa7.04□□□□□ -1.28
PHGDH-217ENST00000641455 GALNT12Q8IXK2 581 aa7.04□□□□□ -1.28
PHGDH-217ENST00000641455 CCDC170Q8IYT3 715 aa7.04□□□□□ -1.28
PHGDH-217ENST00000641455 WDSUB1Q8N9V3 476 aa7.04□□□□□ -1.28
PHGDH-217ENST00000641455 OR10H5Q8NGA6 315 aa7.04□□□□□ -1.28
PHGDH-217ENST00000641455 FAM168AQ92567 244 aa7.04□□□□□ -1.28
PHGDH-217ENST00000641455 HTRA1Q92743 480 aa7.04□□□□□ -1.28
PHGDH-217ENST00000641455 OMA1Q96E52 524 aa7.04□□□□□ -1.28
PHGDH-217ENST00000641455 TRAF4Q9BUZ4 470 aaPredicted RBP7.04□□□□□ -1.28
PHGDH-217ENST00000641455 CACNG6Q9BXT2 260 aa7.04□□□□□ -1.28
PHGDH-217ENST00000641455 MS4A8Q9BY19 250 aa7.04□□□□□ -1.28
PHGDH-217ENST00000641455 PITHD1Q9GZP4 211 aaPredicted RBP7.04□□□□□ -1.28
PHGDH-217ENST00000641455 STMN4Q9H169 189 aaPredicted RBP7.04□□□□□ -1.28
PHGDH-217ENST00000641455 NXF5Q9H1B4 397 aaKnown RBP7.04□□□□□ -1.28
PHGDH-217ENST00000641455 RNF122Q9H9V4 155 aa7.04□□□□□ -1.28
PHGDH-217ENST00000641455 NGBQ9NPG2 151 aa7.04□□□□□ -1.28
PHGDH-217ENST00000641455 FAIMQ9NVQ4 179 aa7.04□□□□□ -1.28
PHGDH-217ENST00000641455 MS4A12Q9NXJ0 267 aa7.04□□□□□ -1.28
PHGDH-217ENST00000641455 PHF11Q9UIL8 331 aa7.04□□□□□ -1.28
PHGDH-217ENST00000641455 FBXL2Q9UKC9 423 aa7.04□□□□□ -1.28
PHGDH-217ENST00000641455 IKZF3Q9UKT9 509 aa7.04□□□□□ -1.28
PHGDH-217ENST00000641455 CLEC4AQ9UMR7 237 aa7.04□□□□□ -1.28
PHGDH-217ENST00000641455 B3GALT5Q9Y2C3 310 aa7.04□□□□□ -1.28
PHGDH-217ENST00000641455 A0A0G2JK05 382 aa7.03□□□□□ -1.28
PHGDH-217ENST00000641455 H0YC42 278 aa7.03□□□□□ -1.28
PHGDH-217ENST00000641455 GPR75O95800 540 aa7.03□□□□□ -1.28
PHGDH-217ENST00000641455 TGFB1P01137 390 aa7.03□□□□□ -1.28
PHGDH-217ENST00000641455 NR2F6P10588 404 aa7.03□□□□□ -1.28
PHGDH-217ENST00000641455 FCGR2AP12318 317 aa7.03□□□□□ -1.28
PHGDH-217ENST00000641455 PTMSP20962 102 aa7.03□□□□□ -1.28
PHGDH-217ENST00000641455 NT5EP21589 574 aa7.03□□□□□ -1.28
PHGDH-217ENST00000641455 USF1P22415 310 aaPredicted RBP7.03□□□□□ -1.28
PHGDH-217ENST00000641455 SRP14P37108 136 aaKnown RBP7.03□□□□□ -1.28
PHGDH-217ENST00000641455 PTGDSP41222 190 aa7.03□□□□□ -1.28
PHGDH-217ENST00000641455 HNMTP50135 292 aa7.03□□□□□ -1.28
PHGDH-217ENST00000641455 CDH11P55287 796 aa7.03□□□□□ -1.28
PHGDH-217ENST00000641455 TPD52P55327 224 aaPredicted RBP7.03□□□□□ -1.28
PHGDH-217ENST00000641455 RPS3AP61247 264 aaKnown RBP7.03□□□□□ -1.28
PHGDH-217ENST00000641455 ZNF844Q08AG5 666 aa7.03□□□□□ -1.28
PHGDH-217ENST00000641455 KIF5AQ12840 1032 aa7.03□□□□□ -1.28
PHGDH-217ENST00000641455 SNTA1Q13424 505 aa7.03□□□□□ -1.28
PHGDH-217ENST00000641455 DDX39BQ13838 428 aaKnown RBP7.03□□□□□ -1.28
PHGDH-217ENST00000641455 GGTLC2Q14390 218 aa7.03□□□□□ -1.28
PHGDH-217ENST00000641455 BCL2A1Q16548 175 aa7.03□□□□□ -1.28
PHGDH-217ENST00000641455 PPP1R3AQ16821 1122 aa7.03□□□□□ -1.28
PHGDH-217ENST00000641455 CTU2Q2VPK5 515 aaKnown RBP7.03□□□□□ -1.28
PHGDH-217ENST00000641455 TMEM35AQ53FP2 167 aa7.03□□□□□ -1.28
PHGDH-217ENST00000641455 PAGE2BQ5JRK9 111 aa7.03□□□□□ -1.28
PHGDH-217ENST00000641455 NCMAPQ5T1S8 102 aa7.03□□□□□ -1.28
PHGDH-217ENST00000641455 STK32CQ86UX6 486 aa7.03□□□□□ -1.28
PHGDH-217ENST00000641455 ZNF525Q8N782 197 aa7.03□□□□□ -1.28
PHGDH-217ENST00000641455 BANPQ8N9N5 519 aa7.03□□□□□ -1.28
PHGDH-217ENST00000641455 C2CD4AQ8NCU7 369 aaPredicted RBP7.03□□□□□ -1.28
PHGDH-217ENST00000641455 ADCY4Q8NFM4 1077 aa7.03□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms