RNA–Protein interactions for RNA: ENST00000641074.1

PHGDH-209, Transcript of phosphoglycerate dehydrogenase, humanhuman

BASIC

Gene PHGDH, Length 1,780 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-209ENST00000641074 DSG2Q14126 1118 aa17.04■□□□□ 0.32
PHGDH-209ENST00000641074 GNA13Q14344 377 aa17.04■□□□□ 0.32
PHGDH-209ENST00000641074 GPAT3Q53EU6 434 aa17.04■□□□□ 0.32
PHGDH-209ENST00000641074 C1orf189Q5VU69 101 aa17.04■□□□□ 0.32
PHGDH-209ENST00000641074 STK32CQ86UX6 486 aa17.04■□□□□ 0.32
PHGDH-209ENST00000641074 HS3ST5Q8IZT8 346 aa17.04■□□□□ 0.32
PHGDH-209ENST00000641074 VWA5B2Q8N398 1253 aa17.04■□□□□ 0.32
PHGDH-209ENST00000641074 BBS10Q8TAM1 723 aa17.04■□□□□ 0.32
PHGDH-209ENST00000641074 SLC9A6Q92581 669 aa17.04■□□□□ 0.32
PHGDH-209ENST00000641074 ATOH1Q92858 354 aaPredicted RBP17.04■□□□□ 0.32
PHGDH-209ENST00000641074 RBM18Q96H35 190 aaKnown RBP17.04■□□□□ 0.32
PHGDH-209ENST00000641074 CNDP2Q96KP4 475 aaKnown RBP17.04■□□□□ 0.32
PHGDH-209ENST00000641074 OR6C1Q96RD1 312 aa17.04■□□□□ 0.32
PHGDH-209ENST00000641074 ZNF304Q9HCX3 659 aa17.04■□□□□ 0.32
PHGDH-209ENST00000641074 GIN1Q9NXP7 522 aa17.04■□□□□ 0.32
PHGDH-209ENST00000641074 NDUFAF4Q9P032 175 aa17.04■□□□□ 0.32
PHGDH-209ENST00000641074 LIPT1Q9Y234 373 aa17.04■□□□□ 0.32
PHGDH-209ENST00000641074 SH3GLB1Q9Y371 365 aa17.04■□□□□ 0.32
PHGDH-209ENST00000641074 PCDHGB2Q9Y5G2 931 aa17.04■□□□□ 0.32
PHGDH-209ENST00000641074 GPC6Q9Y625 555 aaPredicted RBP17.04■□□□□ 0.32
PHGDH-209ENST00000641074 U3KQV3 271 aa17.04■□□□□ 0.32
PHGDH-209ENST00000641074 NTN3O00634 580 aaPredicted RBP17.03■□□□□ 0.32
PHGDH-209ENST00000641074 E2F6O75461 281 aa17.03■□□□□ 0.32
PHGDH-209ENST00000641074 H6PDO95479 791 aa17.03■□□□□ 0.32
PHGDH-209ENST00000641074 ACP2P11117 423 aa17.03■□□□□ 0.32
PHGDH-209ENST00000641074 DUSP5Q16690 384 aa17.03■□□□□ 0.32
PHGDH-209ENST00000641074 CLPPQ16740 277 aaPredicted RBP17.03■□□□□ 0.32
PHGDH-209ENST00000641074 EXOSC6Q5RKV6 272 aaKnown RBP17.03■□□□□ 0.32
PHGDH-209ENST00000641074 ATAD3BQ5T9A4 648 aa17.03■□□□□ 0.32
PHGDH-209ENST00000641074 HEPHL1Q6MZM0 1159 aa17.03■□□□□ 0.32
PHGDH-209ENST00000641074 SLITRK4Q8IW52 837 aa17.03■□□□□ 0.32
PHGDH-209ENST00000641074 GALNT12Q8IXK2 581 aa17.03■□□□□ 0.32
PHGDH-209ENST00000641074 SVOPLQ8N434 492 aa17.03■□□□□ 0.32
PHGDH-209ENST00000641074 GPR32P1Q8NGA4 272 aa17.03■□□□□ 0.32
PHGDH-209ENST00000641074 OR5K1Q8NHB7 308 aa17.03■□□□□ 0.32
PHGDH-209ENST00000641074 MAGEE2Q8TD90 523 aaPredicted RBP17.03■□□□□ 0.32
PHGDH-209ENST00000641074 GEMIN6Q8WXD5 167 aaKnown RBP17.03■□□□□ 0.32
PHGDH-209ENST00000641074 CDS1Q92903 461 aa17.03■□□□□ 0.32
PHGDH-209ENST00000641074 RIT1Q92963 219 aa17.03■□□□□ 0.32
PHGDH-209ENST00000641074 RNF31Q96EP0 1072 aa17.03■□□□□ 0.32
PHGDH-209ENST00000641074 DGAT2Q96PD7 388 aa17.03■□□□□ 0.32
PHGDH-209ENST00000641074 NECTIN3Q9NQS3 549 aa17.03■□□□□ 0.32
PHGDH-209ENST00000641074 A0A0G2JPF8 293 aa17.02■□□□□ 0.32
PHGDH-209ENST00000641074 HNRNPCL2B2RXH8 293 aa17.02■□□□□ 0.32
PHGDH-209ENST00000641074 HNRNPCL3B7ZW38 293 aa17.02■□□□□ 0.32
PHGDH-209ENST00000641074 DENRO43583 198 aaKnown RBP17.02■□□□□ 0.32
PHGDH-209ENST00000641074 SERPINB7O75635 380 aa17.02■□□□□ 0.32
PHGDH-209ENST00000641074 LDOC1O95751 146 aaPredicted RBP17.02■□□□□ 0.32
PHGDH-209ENST00000641074 CBX7O95931 251 aa17.02■□□□□ 0.32
PHGDH-209ENST00000641074 RECKO95980 971 aa17.02■□□□□ 0.32
PHGDH-209ENST00000641074 HNRNPCL4P0DMR1 293 aa17.02■□□□□ 0.32
PHGDH-209ENST00000641074 S1PR1P21453 382 aa17.02■□□□□ 0.32
PHGDH-209ENST00000641074 FBLP22087 321 aaKnown RBP17.02■□□□□ 0.32
PHGDH-209ENST00000641074 STT3AP46977 705 aa17.02■□□□□ 0.32
PHGDH-209ENST00000641074 MAPK10P53779 464 aa17.02■□□□□ 0.32
PHGDH-209ENST00000641074 DUSP8Q13202 625 aa17.02■□□□□ 0.32
PHGDH-209ENST00000641074 MED21Q13503 144 aa17.02■□□□□ 0.32
PHGDH-209ENST00000641074 NHSL2Q5HYW2 709 aa17.02■□□□□ 0.32
PHGDH-209ENST00000641074 PHF19Q5T6S3 580 aa17.02■□□□□ 0.32
PHGDH-209ENST00000641074 PRAMEF8Q5VWM4 474 aa17.02■□□□□ 0.32
PHGDH-209ENST00000641074 PRAMEF7Q5VXH5 474 aa17.02■□□□□ 0.32
PHGDH-209ENST00000641074 MED25Q71SY5 747 aa17.02■□□□□ 0.32
PHGDH-209ENST00000641074 C16orf62Q7Z3J2 963 aa17.02■□□□□ 0.32
PHGDH-209ENST00000641074 KRT73Q86Y46 540 aa17.02■□□□□ 0.32
PHGDH-209ENST00000641074 TRNT1Q96Q11 434 aaKnown RBP17.02■□□□□ 0.32
PHGDH-209ENST00000641074 OR1F2PQ96R84 312 aa17.02■□□□□ 0.32
PHGDH-209ENST00000641074 EXD2Q9NVH0 621 aa17.02■□□□□ 0.32
PHGDH-209ENST00000641074 SEC14L3Q9UDX4 400 aa17.02■□□□□ 0.32
PHGDH-209ENST00000641074 D6RAR5 112 aa17.02■□□□□ 0.31
PHGDH-209ENST00000641074 AGR2O95994 175 aa17.02■□□□□ 0.31
PHGDH-209ENST00000641074 FESP07332 822 aa17.02■□□□□ 0.31
PHGDH-209ENST00000641074 ETS2P15036 469 aa17.02■□□□□ 0.31
PHGDH-209ENST00000641074 KCNJ5P48544 419 aa17.02■□□□□ 0.31
PHGDH-209ENST00000641074 PUM1Q14671 1186 aaKnown RBP eCLIP17.02■□□□□ 0.31
PHGDH-209ENST00000641074 OR52R1Q8NGF1 315 aa17.02■□□□□ 0.31
PHGDH-209ENST00000641074 RHBDD1Q8TEB9 315 aa17.02■□□□□ 0.31
PHGDH-209ENST00000641074 APOBEC4Q8WW27 367 aaKnown RBP17.02■□□□□ 0.31
PHGDH-209ENST00000641074 SDCCAG3Q96C92 435 aa17.02■□□□□ 0.31
PHGDH-209ENST00000641074 BTBD2Q9BX70 525 aa17.02■□□□□ 0.31
PHGDH-209ENST00000641074 OSBPL11Q9BXB4 747 aa17.02■□□□□ 0.31
PHGDH-209ENST00000641074 SLC38A1Q9H2H9 487 aa17.02■□□□□ 0.31
PHGDH-209ENST00000641074 PIGUQ9H490 435 aa17.02■□□□□ 0.31
PHGDH-209ENST00000641074 Q9H521 79 aa17.02■□□□□ 0.31
PHGDH-209ENST00000641074 THSD1Q9NS62 852 aa17.02■□□□□ 0.31
PHGDH-209ENST00000641074 SIDT1Q9NXL6 827 aaKnown RBP17.02■□□□□ 0.31
PHGDH-209ENST00000641074 SRPK3Q9UPE1 567 aa17.02■□□□□ 0.31
PHGDH-209ENST00000641074 SEC16AO15027 2179 aa17.01■□□□□ 0.31
PHGDH-209ENST00000641074 A8MVJ9 347 aa17.01■□□□□ 0.31
PHGDH-209ENST00000641074 HRKO00198 91 aa17.01■□□□□ 0.31
PHGDH-209ENST00000641074 DPM1O60762 260 aa17.01■□□□□ 0.31
PHGDH-209ENST00000641074 TIAF1O95411 115 aa17.01■□□□□ 0.31
PHGDH-209ENST00000641074 ALDH3A2P51648 485 aa17.01■□□□□ 0.31
PHGDH-209ENST00000641074 CHRNEQ04844 493 aa17.01■□□□□ 0.31
PHGDH-209ENST00000641074 DAG1Q14118 895 aa17.01■□□□□ 0.31
PHGDH-209ENST00000641074 ARHGAP40Q5TG30 622 aa17.01■□□□□ 0.31
PHGDH-209ENST00000641074 LAIR1Q6GTX8 287 aa17.01■□□□□ 0.31
PHGDH-209ENST00000641074 RHBDD2Q6NTF9 364 aa17.01■□□□□ 0.31
PHGDH-209ENST00000641074 ZCCHC12Q6PEW1 402 aa17.01■□□□□ 0.31
PHGDH-209ENST00000641074 SHQ1Q6PI26 577 aaKnown RBP17.01■□□□□ 0.31
PHGDH-209ENST00000641074 HMGN2P46Q86SG4 172 aa17.01■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 77.9 ms