RNA–Protein interactions for RNA: ENST00000640036.1

SCN1A-218, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN1A, Length 8,131 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-218ENST00000640036 LRRN4Q8WUT4 740 aa4.77□□□□□ -1.65
SCN1A-218ENST00000640036 SPTSSAQ969W0 71 aa4.77□□□□□ -1.65
SCN1A-218ENST00000640036 RNF145Q96MT1 663 aa4.77□□□□□ -1.65
SCN1A-218ENST00000640036 TRIB1Q96RU8 372 aa4.77□□□□□ -1.65
SCN1A-218ENST00000640036 PKP4Q99569 1192 aa4.77□□□□□ -1.65
SCN1A-218ENST00000640036 PIGQQ9BRB3 760 aa4.77□□□□□ -1.65
SCN1A-218ENST00000640036 C1orf21Q9H246 121 aa4.77□□□□□ -1.65
SCN1A-218ENST00000640036 ZNF395Q9H8N7 513 aaPredicted RBP4.77□□□□□ -1.65
SCN1A-218ENST00000640036 BRD7Q9NPI1 651 aa4.77□□□□□ -1.65
SCN1A-218ENST00000640036 TAS2R16Q9NYV7 291 aa4.77□□□□□ -1.65
SCN1A-218ENST00000640036 WRAP73Q9P2S5 460 aaPredicted RBP4.77□□□□□ -1.65
SCN1A-218ENST00000640036 KIAA1217Q5T5P2 1943 aa4.77□□□□□ -1.65
SCN1A-218ENST00000640036 GLOD5A6NK44 160 aa4.77□□□□□ -1.65
SCN1A-218ENST00000640036 ADAMTS3O15072 1205 aa4.77□□□□□ -1.65
SCN1A-218ENST00000640036 BPNT1O95861 308 aa4.77□□□□□ -1.65
SCN1A-218ENST00000640036 C2P06681 752 aa4.77□□□□□ -1.65
SCN1A-218ENST00000640036 EPHA8P29322 1005 aaPredicted RBP4.77□□□□□ -1.65
SCN1A-218ENST00000640036 HTR3AP46098 478 aa4.77□□□□□ -1.65
SCN1A-218ENST00000640036 SCN1BQ07699 218 aa4.77□□□□□ -1.65
SCN1A-218ENST00000640036 QPRTQ15274 297 aa4.77□□□□□ -1.65
SCN1A-218ENST00000640036 ZCWPW2Q504Y3 356 aa4.77□□□□□ -1.65
SCN1A-218ENST00000640036 FAM76BQ5HYJ3 339 aa4.77□□□□□ -1.65
SCN1A-218ENST00000640036 TMEM173Q86WV6 379 aaPredicted RBP4.77□□□□□ -1.65
SCN1A-218ENST00000640036 SLC15A3Q8IY34 581 aa4.77□□□□□ -1.65
SCN1A-218ENST00000640036 ZNF808Q8N4W9 903 aaPredicted RBP4.77□□□□□ -1.65
SCN1A-218ENST00000640036 KYQ8NBH2 561 aa4.77□□□□□ -1.65
SCN1A-218ENST00000640036 CHST4Q8NCG5 386 aa4.77□□□□□ -1.65
SCN1A-218ENST00000640036 DPH1Q9BZG8 443 aa4.77□□□□□ -1.65
SCN1A-218ENST00000640036 IKZF4Q9H2S9 585 aa4.77□□□□□ -1.65
SCN1A-218ENST00000640036 L2HGDHQ9H9P8 463 aa4.77□□□□□ -1.65
SCN1A-218ENST00000640036 NOSIPQ9Y314 301 aaKnown RBP4.77□□□□□ -1.65
SCN1A-218ENST00000640036 GRIP1Q9Y3R0 1128 aa4.77□□□□□ -1.65
SCN1A-218ENST00000640036 STYXL1Q9Y6J8 313 aa4.77□□□□□ -1.65
SCN1A-218ENST00000640036 A1L4Q6 167 aa4.76□□□□□ -1.65
SCN1A-218ENST00000640036 K7EQS6 105 aa4.76□□□□□ -1.65
SCN1A-218ENST00000640036 RNASET2O00584 256 aaKnown RBP4.76□□□□□ -1.65
SCN1A-218ENST00000640036 MPZL2O60487 215 aa4.76□□□□□ -1.65
SCN1A-218ENST00000640036 KDM4BO94953 1096 aa4.76□□□□□ -1.65
SCN1A-218ENST00000640036 OR5F1O95221 314 aa4.76□□□□□ -1.65
SCN1A-218ENST00000640036 CBX7O95931 251 aa4.76□□□□□ -1.65
SCN1A-218ENST00000640036 UBTFL6P0CB48 400 aaPredicted RBP4.76□□□□□ -1.65
SCN1A-218ENST00000640036 EMP3P54852 163 aa4.76□□□□□ -1.65
SCN1A-218ENST00000640036 ACTG1P63261 375 aa4.76□□□□□ -1.65
SCN1A-218ENST00000640036 ARF5P84085 180 aa4.76□□□□□ -1.65
SCN1A-218ENST00000640036 OGDHQ02218 1023 aa4.76□□□□□ -1.65
SCN1A-218ENST00000640036 GALNT2Q10471 571 aa4.76□□□□□ -1.65
SCN1A-218ENST00000640036 SFT2D3Q587I9 215 aa4.76□□□□□ -1.65
SCN1A-218ENST00000640036 C6orf141Q5SZD1 244 aa4.76□□□□□ -1.65
SCN1A-218ENST00000640036 LIPJQ5W064 366 aa4.76□□□□□ -1.65
SCN1A-218ENST00000640036 ARHGAP11AQ6P4F7 1023 aa4.76□□□□□ -1.65
SCN1A-218ENST00000640036 PAQR3Q6TCH7 311 aa4.76□□□□□ -1.65
SCN1A-218ENST00000640036 CRELD2Q6UXH1 353 aaPredicted RBP4.76□□□□□ -1.65
SCN1A-218ENST00000640036 PROSER1Q86XN7 944 aa4.76□□□□□ -1.65
SCN1A-218ENST00000640036 PDSS2Q86YH6 399 aa4.76□□□□□ -1.65
SCN1A-218ENST00000640036 REXO1L1PQ8IX06 675 aa4.76□□□□□ -1.65
SCN1A-218ENST00000640036 PNPT1Q8TCS8 783 aaKnown RBP4.76□□□□□ -1.65
SCN1A-218ENST00000640036 BTF3L4Q96K17 158 aa4.76□□□□□ -1.65
SCN1A-218ENST00000640036 ATP6V1G3Q96LB4 118 aa4.76□□□□□ -1.65
SCN1A-218ENST00000640036 SGCZQ96LD1 299 aa4.76□□□□□ -1.65
SCN1A-218ENST00000640036 ZNF583Q96ND8 569 aa4.76□□□□□ -1.65
SCN1A-218ENST00000640036 IFT27Q9BW83 186 aa4.76□□□□□ -1.65
SCN1A-218ENST00000640036 OR51B5Q9H339 312 aa4.76□□□□□ -1.65
SCN1A-218ENST00000640036 TFB2MQ9H5Q4 396 aaKnown RBP4.76□□□□□ -1.65
SCN1A-218ENST00000640036 LIPT1Q9Y234 373 aa4.76□□□□□ -1.65
SCN1A-218ENST00000640036 PKDREJQ9NTG1 2253 aa4.76□□□□□ -1.65
SCN1A-218ENST00000640036 TRPM3Q9HCF6 1732 aaPredicted RBP4.76□□□□□ -1.65
SCN1A-218ENST00000640036 A0A1B0GVI7 797 aa4.76□□□□□ -1.65
SCN1A-218ENST00000640036 LSM1O15116 133 aaKnown RBP4.76□□□□□ -1.65
SCN1A-218ENST00000640036 DNAJA2O60884 412 aa4.76□□□□□ -1.65
SCN1A-218ENST00000640036 RDH16O75452 317 aa4.76□□□□□ -1.65
SCN1A-218ENST00000640036 GSTM3P21266 225 aa4.76□□□□□ -1.65
SCN1A-218ENST00000640036 AQP1P29972 269 aa4.76□□□□□ -1.65
SCN1A-218ENST00000640036 GSSP48637 474 aa4.76□□□□□ -1.65
SCN1A-218ENST00000640036 GSK3BP49841 420 aa4.76□□□□□ -1.65
SCN1A-218ENST00000640036 SGSHP51688 502 aa4.76□□□□□ -1.65
SCN1A-218ENST00000640036 AP2S1P53680 142 aaPredicted RBP4.76□□□□□ -1.65
SCN1A-218ENST00000640036 TAS2R40P59535 323 aa4.76□□□□□ -1.65
SCN1A-218ENST00000640036 TBPL1P62380 186 aa4.76□□□□□ -1.65
SCN1A-218ENST00000640036 SEC23BQ15437 767 aa4.76□□□□□ -1.65
SCN1A-218ENST00000640036 PLEKHN1Q494U1 663 aaPredicted RBP4.76□□□□□ -1.65
SCN1A-218ENST00000640036 C4orf17Q53FE4 359 aa4.76□□□□□ -1.65
SCN1A-218ENST00000640036 ZNF648Q5T619 568 aaPredicted RBP4.76□□□□□ -1.65
SCN1A-218ENST00000640036 SPERTQ8NA61 448 aa4.76□□□□□ -1.65
SCN1A-218ENST00000640036 LRRC58Q96CX6 371 aa4.76□□□□□ -1.65
SCN1A-218ENST00000640036 APOPT1Q96IL0 206 aa4.76□□□□□ -1.65
SCN1A-218ENST00000640036 PARD6BQ9BYG5 372 aa4.76□□□□□ -1.65
SCN1A-218ENST00000640036 DCLRE1BQ9H816 532 aa4.76□□□□□ -1.65
SCN1A-218ENST00000640036 MLXQ9UH92 298 aa4.76□□□□□ -1.65
SCN1A-218ENST00000640036 HAO1Q9UJM8 370 aa4.76□□□□□ -1.65
SCN1A-218ENST00000640036 PRPF19Q9UMS4 504 aaKnown RBP4.76□□□□□ -1.65
SCN1A-218ENST00000640036 HS3ST2Q9Y278 367 aa4.76□□□□□ -1.65
SCN1A-218ENST00000640036 ATG4BQ9Y4P1 393 aa4.76□□□□□ -1.65
SCN1A-218ENST00000640036 WIF1Q9Y5W5 379 aa4.76□□□□□ -1.65
SCN1A-218ENST00000640036 A0A087WXM4 84 aa4.76□□□□□ -1.65
SCN1A-218ENST00000640036 TSPAN4O14817 238 aa4.76□□□□□ -1.65
SCN1A-218ENST00000640036 PMM2O15305 246 aa4.76□□□□□ -1.65
SCN1A-218ENST00000640036 HTRA2O43464 458 aaPredicted RBP4.76□□□□□ -1.65
SCN1A-218ENST00000640036 RCBTB2O95199 551 aa4.76□□□□□ -1.65
SCN1A-218ENST00000640036 F7P08709 466 aaPredicted RBP4.76□□□□□ -1.65
SCN1A-218ENST00000640036 DRD2P14416 443 aa4.76□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 78.8 ms