RNA–Protein interactions for RNA: ENST00000639841.1

NECAP1-220, Transcript of NECAP endocytosis associated 1, humanhuman

TSL 5

Gene NECAP1, Length 1,982 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-220ENST00000639841 MTRF1LQ9UGC7 380 aaKnown RBP6.77□□□□□ -1.33
NECAP1-220ENST00000639841 LRP12Q9Y561 859 aa6.77□□□□□ -1.33
NECAP1-220ENST00000639841 KLF2Q9Y5W3 355 aaPredicted RBP6.77□□□□□ -1.33
NECAP1-220ENST00000639841 EP300Q09472 2414 aaPredicted RBP6.76□□□□□ -1.33
NECAP1-220ENST00000639841 A0A1B0GUA9 196 aa6.76□□□□□ -1.33
NECAP1-220ENST00000639841 TMCO5BA8MYB1 307 aa6.76□□□□□ -1.33
NECAP1-220ENST00000639841 F8VVB4 439 aa6.76□□□□□ -1.33
NECAP1-220ENST00000639841 F8VWA3 439 aa6.76□□□□□ -1.33
NECAP1-220ENST00000639841 LDB3O75112 727 aa6.76□□□□□ -1.33
NECAP1-220ENST00000639841 MFAP3LO75121 409 aa6.76□□□□□ -1.33
NECAP1-220ENST00000639841 SERPINF2P08697 491 aa6.76□□□□□ -1.33
NECAP1-220ENST00000639841 NAMPTP43490 491 aa6.76□□□□□ -1.33
NECAP1-220ENST00000639841 GPR12P47775 334 aa6.76□□□□□ -1.33
NECAP1-220ENST00000639841 CXCL12P48061 93 aa6.76□□□□□ -1.33
NECAP1-220ENST00000639841 CCT8P50990 548 aa6.76□□□□□ -1.33
NECAP1-220ENST00000639841 BCAP31P51572 246 aa6.76□□□□□ -1.33
NECAP1-220ENST00000639841 SRSF3P84103 164 aaKnown RBP6.76□□□□□ -1.33
NECAP1-220ENST00000639841 ZXDBP98169 803 aa6.76□□□□□ -1.33
NECAP1-220ENST00000639841 CRYZQ08257 329 aaKnown RBP6.76□□□□□ -1.33
NECAP1-220ENST00000639841 KEAP1Q14145 624 aa6.76□□□□□ -1.33
NECAP1-220ENST00000639841 NCF4Q15080 339 aa6.76□□□□□ -1.33
NECAP1-220ENST00000639841 TEX44Q53QW1 395 aa6.76□□□□□ -1.33
NECAP1-220ENST00000639841 TCERG1LQ5VWI1 586 aa6.76□□□□□ -1.33
NECAP1-220ENST00000639841 PARM1Q6UWI2 310 aa6.76□□□□□ -1.33
NECAP1-220ENST00000639841 TRMT1LQ7Z2T5 733 aaKnown RBP6.76□□□□□ -1.33
NECAP1-220ENST00000639841 LUZP2Q86TE4 346 aa6.76□□□□□ -1.33
NECAP1-220ENST00000639841 SERPINA11Q86U17 422 aa6.76□□□□□ -1.33
NECAP1-220ENST00000639841 AMIGO1Q86WK6 493 aa6.76□□□□□ -1.33
NECAP1-220ENST00000639841 CBWD2Q8IUF1 395 aa6.76□□□□□ -1.33
NECAP1-220ENST00000639841 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP6.76□□□□□ -1.33
NECAP1-220ENST00000639841 BEST3Q8N1M1 668 aa6.76□□□□□ -1.33
NECAP1-220ENST00000639841 TRPV3Q8NET8 790 aa6.76□□□□□ -1.33
NECAP1-220ENST00000639841 OR13F1Q8NGS4 319 aa6.76□□□□□ -1.33
NECAP1-220ENST00000639841 ZNF596Q8TC21 504 aa6.76□□□□□ -1.33
NECAP1-220ENST00000639841 SSMEM1Q8WWF3 244 aa6.76□□□□□ -1.33
NECAP1-220ENST00000639841 RPL3LQ92901 407 aaKnown RBP6.76□□□□□ -1.33
NECAP1-220ENST00000639841 RFKQ969G6 155 aa6.76□□□□□ -1.33
NECAP1-220ENST00000639841 PYCR2Q96C36 320 aa6.76□□□□□ -1.33
NECAP1-220ENST00000639841 PRMT1Q99873 361 aaKnown RBP6.76□□□□□ -1.33
NECAP1-220ENST00000639841 LXNQ9BS40 222 aa6.76□□□□□ -1.33
NECAP1-220ENST00000639841 SGPP1Q9BX95 441 aa6.76□□□□□ -1.33
NECAP1-220ENST00000639841 SLA2Q9H6Q3 261 aa6.76□□□□□ -1.33
NECAP1-220ENST00000639841 ELOVL3Q9HB03 270 aa6.76□□□□□ -1.33
NECAP1-220ENST00000639841 ZNF160Q9HCG1 818 aa6.76□□□□□ -1.33
NECAP1-220ENST00000639841 CYSLTR2Q9NS75 346 aa6.76□□□□□ -1.33
NECAP1-220ENST00000639841 HIF1ANQ9NWT6 349 aa6.76□□□□□ -1.33
NECAP1-220ENST00000639841 GAR1Q9NY12 217 aaKnown RBP6.76□□□□□ -1.33
NECAP1-220ENST00000639841 CD300AQ9UGN4 299 aa6.76□□□□□ -1.33
NECAP1-220ENST00000639841 RNF24Q9Y225 148 aa6.76□□□□□ -1.33
NECAP1-220ENST00000639841 NME7Q9Y5B8 376 aa6.76□□□□□ -1.33
NECAP1-220ENST00000639841 CEP250Q9BV73 2442 aa6.75□□□□□ -1.33
NECAP1-220ENST00000639841 OR1F1O43749 312 aa6.75□□□□□ -1.33
NECAP1-220ENST00000639841 EGFP01133 1207 aa6.75□□□□□ -1.33
NECAP1-220ENST00000639841 CYP1A1P04798 512 aaPredicted RBP6.75□□□□□ -1.33
NECAP1-220ENST00000639841 TDGF1P13385 188 aa6.75□□□□□ -1.33
NECAP1-220ENST00000639841 ENGP17813 658 aa6.75□□□□□ -1.33
NECAP1-220ENST00000639841 DAOAP59103 153 aa6.75□□□□□ -1.33
NECAP1-220ENST00000639841 SELENOVP59797 346 aa6.75□□□□□ -1.33
NECAP1-220ENST00000639841 MBTD1Q05BQ5 628 aa6.75□□□□□ -1.33
NECAP1-220ENST00000639841 PJVKQ0ZLH3 352 aa6.75□□□□□ -1.33
NECAP1-220ENST00000639841 ORC2Q13416 577 aaPredicted RBP6.75□□□□□ -1.33
NECAP1-220ENST00000639841 KPNB1Q14974 876 aaKnown RBP6.75□□□□□ -1.33
NECAP1-220ENST00000639841 SYT14P1Q58G82 188 aa6.75□□□□□ -1.33
NECAP1-220ENST00000639841 CTSL3PQ5NE16 218 aa6.75□□□□□ -1.33
NECAP1-220ENST00000639841 GGNBP1Q5YKI7 109 aa6.75□□□□□ -1.33
NECAP1-220ENST00000639841 TRIM65Q6PJ69 517 aa6.75□□□□□ -1.33
NECAP1-220ENST00000639841 EIF3MQ7L2H7 374 aaKnown RBP6.75□□□□□ -1.33
NECAP1-220ENST00000639841 TMC8Q8IU68 726 aa6.75□□□□□ -1.33
NECAP1-220ENST00000639841 FAM47BQ8NA70 645 aa6.75□□□□□ -1.33
NECAP1-220ENST00000639841 LNX1Q8TBB1 728 aaPredicted RBP6.75□□□□□ -1.33
NECAP1-220ENST00000639841 FGF14Q92915 247 aa6.75□□□□□ -1.33
NECAP1-220ENST00000639841 LRRC2Q9BYS8 371 aa6.75□□□□□ -1.33
NECAP1-220ENST00000639841 ACOXLQ9NUZ1 547 aa6.75□□□□□ -1.33
NECAP1-220ENST00000639841 CDH9Q9ULB4 789 aa6.75□□□□□ -1.33
NECAP1-220ENST00000639841 TMED7Q9Y3B3 224 aa6.75□□□□□ -1.33
NECAP1-220ENST00000639841 STK36Q9NRP7 1315 aa6.75□□□□□ -1.33
NECAP1-220ENST00000639841 ATXN2Q99700 1313 aaKnown RBP6.75□□□□□ -1.33
NECAP1-220ENST00000639841 TRBV5-7A0A0A0MS05 114 aa6.75□□□□□ -1.33
NECAP1-220ENST00000639841 CASTOR2A6NHX0 329 aa6.75□□□□□ -1.33
NECAP1-220ENST00000639841 A6NNC1 897 aa6.75□□□□□ -1.33
NECAP1-220ENST00000639841 MARCH11A6NNE9 402 aa6.75□□□□□ -1.33
NECAP1-220ENST00000639841 EEF2KO00418 725 aaKnown RBP6.75□□□□□ -1.33
NECAP1-220ENST00000639841 POLR1CO15160 346 aaPredicted RBP6.75□□□□□ -1.33
NECAP1-220ENST00000639841 B4GALT3O60512 393 aa6.75□□□□□ -1.33
NECAP1-220ENST00000639841 NEURL1O76050 574 aa6.75□□□□□ -1.33
NECAP1-220ENST00000639841 CAVIN2O95810 425 aa6.75□□□□□ -1.33
NECAP1-220ENST00000639841 PSMC3P17980 439 aa6.75□□□□□ -1.33
NECAP1-220ENST00000639841 ARL2P36404 184 aa6.75□□□□□ -1.33
NECAP1-220ENST00000639841 NUMBP49757 651 aa6.75□□□□□ -1.33
NECAP1-220ENST00000639841 ARHGDIBP52566 201 aa6.75□□□□□ -1.33
NECAP1-220ENST00000639841 MRPS15P82914 257 aaKnown RBP6.75□□□□□ -1.33
NECAP1-220ENST00000639841 TATDN3Q17R31 274 aa6.75□□□□□ -1.33
NECAP1-220ENST00000639841 PLCXD3Q63HM9 321 aa6.75□□□□□ -1.33
NECAP1-220ENST00000639841 Q6ZPB1 254 aaPredicted RBP6.75□□□□□ -1.33
NECAP1-220ENST00000639841 VTCN1Q7Z7D3 282 aa6.75□□□□□ -1.33
NECAP1-220ENST00000639841 RALGPS2Q86X27 583 aaPredicted RBP6.75□□□□□ -1.33
NECAP1-220ENST00000639841 CROCCP3Q8IVE0 287 aa6.75□□□□□ -1.33
NECAP1-220ENST00000639841 SCCPDHQ8NBX0 429 aa6.75□□□□□ -1.33
NECAP1-220ENST00000639841 FAM3CQ92520 227 aa6.75□□□□□ -1.33
NECAP1-220ENST00000639841 SMARCD2Q92925 531 aa6.75□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms