RNA–Protein interactions for RNA: ENST00000638076.1

CLN6-224, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 1 (best)

Gene CLN6, Length 2,323 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-224ENST00000638076 ZG16BQ96DA0 208 aa20.2■□□□□ 0.82
CLN6-224ENST00000638076 SMIM10Q96HG1 83 aa20.2■□□□□ 0.82
CLN6-224ENST00000638076 PRRC1Q96M27 445 aa20.2■□□□□ 0.82
CLN6-224ENST00000638076 SERINC2Q96SA4 455 aa20.2■□□□□ 0.82
CLN6-224ENST00000638076 ALOXE3Q9BYJ1 711 aa20.2■□□□□ 0.82
CLN6-224ENST00000638076 ROGDIQ9GZN7 287 aa20.2■□□□□ 0.82
CLN6-224ENST00000638076 SLC38A1Q9H2H9 487 aa20.2■□□□□ 0.82
CLN6-224ENST00000638076 ETAA1Q9NY74 926 aa20.2■□□□□ 0.82
CLN6-224ENST00000638076 FANCMQ8IYD8 2048 aa20.2■□□□□ 0.82
CLN6-224ENST00000638076 LOC105369274A0A096LPK9 316 aa20.2■□□□□ 0.82
CLN6-224ENST00000638076 LOC102723532A0A0G2JNH3 316 aa20.2■□□□□ 0.82
CLN6-224ENST00000638076 ASNA1O43681 348 aa20.2■□□□□ 0.82
CLN6-224ENST00000638076 DNAJB6O75190 326 aa20.2■□□□□ 0.82
CLN6-224ENST00000638076 PTHP01270 115 aa20.2■□□□□ 0.82
CLN6-224ENST00000638076 CCINQ13939 588 aa20.2■□□□□ 0.82
CLN6-224ENST00000638076 ZNF311Q5JNZ3 666 aa20.2■□□□□ 0.82
CLN6-224ENST00000638076 C6orf132Q5T0Z8 1188 aa20.2■□□□□ 0.82
CLN6-224ENST00000638076 OR4N4Q8N0Y3 316 aa20.2■□□□□ 0.82
CLN6-224ENST00000638076 FRMD1Q8N878 549 aa20.2■□□□□ 0.82
CLN6-224ENST00000638076 B4GALNT2Q8NHY0 566 aa20.2■□□□□ 0.82
CLN6-224ENST00000638076 SH3YL1Q96HL8 342 aaPredicted RBP20.2■□□□□ 0.82
CLN6-224ENST00000638076 ACTRT3Q9BYD9 372 aa20.2■□□□□ 0.82
CLN6-224ENST00000638076 TCEAL2Q9H3H9 227 aaPredicted RBP20.2■□□□□ 0.82
CLN6-224ENST00000638076 PHF11Q9UIL8 331 aa20.2■□□□□ 0.82
CLN6-224ENST00000638076 PILRAQ9UKJ1 303 aa20.2■□□□□ 0.82
CLN6-224ENST00000638076 EFCAB10A6NFE3 127 aa20.19■□□□□ 0.82
CLN6-224ENST00000638076 EFCAB9A8MZ26 197 aa20.19■□□□□ 0.82
CLN6-224ENST00000638076 NADKO95544 446 aaPredicted RBP20.19■□□□□ 0.82
CLN6-224ENST00000638076 TNFP01375 233 aa20.19■□□□□ 0.82
CLN6-224ENST00000638076 RUNX2Q13950 521 aa20.19■□□□□ 0.82
CLN6-224ENST00000638076 FBXO43Q4G163 708 aa20.19■□□□□ 0.82
CLN6-224ENST00000638076 SLX4IPQ5VYV7 408 aa20.19■□□□□ 0.82
CLN6-224ENST00000638076 FAM111BQ6SJ93 734 aa20.19■□□□□ 0.82
CLN6-224ENST00000638076 OR4N5Q8IXE1 308 aa20.19■□□□□ 0.82
CLN6-224ENST00000638076 OR7G2Q8NG99 324 aa20.19■□□□□ 0.82
CLN6-224ENST00000638076 URADA6NGE7 173 aa20.19■□□□□ 0.82
CLN6-224ENST00000638076 SLITRK5O94991 958 aa20.19■□□□□ 0.82
CLN6-224ENST00000638076 SIM1P81133 766 aaPredicted RBP20.19■□□□□ 0.82
CLN6-224ENST00000638076 IRF3Q14653 427 aa20.19■□□□□ 0.82
CLN6-224ENST00000638076 C16orf62Q7Z3J2 963 aa20.19■□□□□ 0.82
CLN6-224ENST00000638076 VRK2Q86Y07 508 aa20.19■□□□□ 0.82
CLN6-224ENST00000638076 SFTPA2Q8IWL1 248 aa20.19■□□□□ 0.82
CLN6-224ENST00000638076 OR4K5Q8NGD3 323 aa20.19■□□□□ 0.82
CLN6-224ENST00000638076 OR4K14Q8NGD5 310 aa20.19■□□□□ 0.82
CLN6-224ENST00000638076 TRNT1Q96Q11 434 aaKnown RBP20.19■□□□□ 0.82
CLN6-224ENST00000638076 TMEM74BQ9NUR3 256 aa20.19■□□□□ 0.82
CLN6-224ENST00000638076 TAS2R16Q9NYV7 291 aa20.19■□□□□ 0.82
CLN6-224ENST00000638076 CNOT2Q9NZN8 540 aaKnown RBP20.19■□□□□ 0.82
CLN6-224ENST00000638076 CPNE7Q9UBL6 633 aa20.19■□□□□ 0.82
CLN6-224ENST00000638076 NDOR1Q9UHB4 597 aa20.19■□□□□ 0.82
CLN6-224ENST00000638076 DAPP1Q9UN19 280 aa20.19■□□□□ 0.82
CLN6-224ENST00000638076 LIPT1Q9Y234 373 aa20.19■□□□□ 0.82
CLN6-224ENST00000638076 B3GALT2O43825 422 aa20.18■□□□□ 0.82
CLN6-224ENST00000638076 ENTPD6O75354 484 aa20.18■□□□□ 0.82
CLN6-224ENST00000638076 ALPPP05187 535 aa20.18■□□□□ 0.82
CLN6-224ENST00000638076 IGHV4-34P06331 123 aa20.18■□□□□ 0.82
CLN6-224ENST00000638076 TNNI3P19429 210 aa20.18■□□□□ 0.82
CLN6-224ENST00000638076 MMP11P24347 488 aa20.18■□□□□ 0.82
CLN6-224ENST00000638076 RABIFP47224 123 aa20.18■□□□□ 0.82
CLN6-224ENST00000638076 OLR1P78380 273 aa20.18■□□□□ 0.82
CLN6-224ENST00000638076 LSM11P83369 360 aaKnown RBP eCLIP20.18■□□□□ 0.82
CLN6-224ENST00000638076 ZNF542PQ5EBM4 170 aa20.18■□□□□ 0.82
CLN6-224ENST00000638076 ATAD3BQ5T9A4 648 aa20.18■□□□□ 0.82
CLN6-224ENST00000638076 C12orf73Q69YU5 71 aa20.18■□□□□ 0.82
CLN6-224ENST00000638076 ZER1Q7Z7L7 766 aa20.18■□□□□ 0.82
CLN6-224ENST00000638076 ADCK1Q86TW2 530 aa20.18■□□□□ 0.82
CLN6-224ENST00000638076 IQCHQ86VS3 1027 aa20.18■□□□□ 0.82
CLN6-224ENST00000638076 CAMKVQ8NCB2 501 aa20.18■□□□□ 0.82
CLN6-224ENST00000638076 ZFYVE21Q9BQ24 234 aa20.18■□□□□ 0.82
CLN6-224ENST00000638076 GIN1Q9NXP7 522 aa20.18■□□□□ 0.82
CLN6-224ENST00000638076 ARHGEF17Q96PE2 2063 aaPredicted RBP20.18■□□□□ 0.82
CLN6-224ENST00000638076 SHISA7A6NL88 538 aa20.18■□□□□ 0.82
CLN6-224ENST00000638076 MAGEB3O15480 346 aa20.18■□□□□ 0.82
CLN6-224ENST00000638076 AIREO43918 545 aa20.18■□□□□ 0.82
CLN6-224ENST00000638076 TP53P04637 393 aaPredicted RBP20.18■□□□□ 0.82
CLN6-224ENST00000638076 EIF2S1P05198 315 aaKnown RBP20.18■□□□□ 0.82
CLN6-224ENST00000638076 ADRA2AP08913 450 aa20.18■□□□□ 0.82
CLN6-224ENST00000638076 PVRP15151 417 aa20.18■□□□□ 0.82
CLN6-224ENST00000638076 CLK1P49759 484 aaKnown RBP20.18■□□□□ 0.82
CLN6-224ENST00000638076 SNRPGP62308 76 aaKnown RBP20.18■□□□□ 0.82
CLN6-224ENST00000638076 CASP12Q6UXS9 341 aa20.18■□□□□ 0.82
CLN6-224ENST00000638076 ABI3BPQ7Z7G0 1075 aa20.18■□□□□ 0.82
CLN6-224ENST00000638076 MORN4Q8NDC4 146 aa20.18■□□□□ 0.82
CLN6-224ENST00000638076 GPBAR1Q8TDU6 330 aa20.18■□□□□ 0.82
CLN6-224ENST00000638076 ADAMTS15Q8TE58 950 aa20.18■□□□□ 0.82
CLN6-224ENST00000638076 FAM3CQ92520 227 aa20.18■□□□□ 0.82
CLN6-224ENST00000638076 ZHX1-C8orf76Q96EF9 292 aa20.18■□□□□ 0.82
CLN6-224ENST00000638076 SLC35A4Q96G79 324 aa20.18■□□□□ 0.82
CLN6-224ENST00000638076 VMP1Q96GC9 406 aa20.18■□□□□ 0.82
CLN6-224ENST00000638076 PRR14Q9BWN1 585 aa20.18■□□□□ 0.82
CLN6-224ENST00000638076 ARMC7Q9H6L4 198 aa20.18■□□□□ 0.82
CLN6-224ENST00000638076 CALML5Q9NZT1 146 aa20.18■□□□□ 0.82
CLN6-224ENST00000638076 USP36Q9P275 1121 aaKnown RBP20.18■□□□□ 0.82
CLN6-224ENST00000638076 PMF1-BGLAPU3KQ54 211 aa20.18■□□□□ 0.82
CLN6-224ENST00000638076 ZNF860A6NHJ4 632 aa20.17■□□□□ 0.82
CLN6-224ENST00000638076 PRAMEF26H0Y7S4 382 aa20.17■□□□□ 0.82
CLN6-224ENST00000638076 H3BQ06 376 aaPredicted RBP20.17■□□□□ 0.82
CLN6-224ENST00000638076 LSSP48449 732 aa20.17■□□□□ 0.82
CLN6-224ENST00000638076 SERPINB10P48595 397 aa20.17■□□□□ 0.82
CLN6-224ENST00000638076 NR1D2Q14995 579 aa20.17■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms