RNA–Protein interactions for RNA: ENST00000637823.1

CLN6-223, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 717 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-223ENST00000637823 IFNA14P01570 189 aa10.98□□□□□ -0.65
CLN6-223ENST00000637823 HEXBP07686 556 aa10.98□□□□□ -0.65
CLN6-223ENST00000637823 ALOX5P09917 674 aa10.98□□□□□ -0.65
CLN6-223ENST00000637823 JMJD7P0C870 316 aa10.98□□□□□ -0.65
CLN6-223ENST00000637823 NR2F1P10589 423 aa10.98□□□□□ -0.65
CLN6-223ENST00000637823 ZNF28P17035 718 aa10.98□□□□□ -0.65
CLN6-223ENST00000637823 ITIH1P19827 911 aa10.98□□□□□ -0.65
CLN6-223ENST00000637823 ETV5P41161 510 aa10.98□□□□□ -0.65
CLN6-223ENST00000637823 CLCN2P51788 898 aa10.98□□□□□ -0.65
CLN6-223ENST00000637823 CHRNB3Q05901 458 aa10.98□□□□□ -0.65
CLN6-223ENST00000637823 FUT7Q11130 342 aa10.98□□□□□ -0.65
CLN6-223ENST00000637823 ZNF267Q14586 743 aaPredicted RBP10.98□□□□□ -0.65
CLN6-223ENST00000637823 EXOSC7Q15024 291 aaKnown RBP10.98□□□□□ -0.65
CLN6-223ENST00000637823 ELAVL1Q15717 326 aaKnown RBP10.98□□□□□ -0.65
CLN6-223ENST00000637823 NSDHLQ15738 373 aa10.98□□□□□ -0.65
CLN6-223ENST00000637823 NKG7Q16617 165 aa10.98□□□□□ -0.65
CLN6-223ENST00000637823 FAM98BQ52LJ0 330 aaKnown RBP10.98□□□□□ -0.65
CLN6-223ENST00000637823 CRB2Q5IJ48 1285 aa10.98□□□□□ -0.65
CLN6-223ENST00000637823 EXOSC6Q5RKV6 272 aaKnown RBP10.98□□□□□ -0.65
CLN6-223ENST00000637823 ATAD3BQ5T9A4 648 aa10.98□□□□□ -0.65
CLN6-223ENST00000637823 HES3Q5TGS1 186 aa10.98□□□□□ -0.65
CLN6-223ENST00000637823 PRAMEF8Q5VWM4 474 aa10.98□□□□□ -0.65
CLN6-223ENST00000637823 MLIPQ5VWP3 458 aa10.98□□□□□ -0.65
CLN6-223ENST00000637823 PRAMEF7Q5VXH5 474 aa10.98□□□□□ -0.65
CLN6-223ENST00000637823 EIF3MQ7L2H7 374 aaKnown RBP10.98□□□□□ -0.65
CLN6-223ENST00000637823 ASCL5Q7RTU5 278 aa10.98□□□□□ -0.65
CLN6-223ENST00000637823 CDRT4Q8N9R6 151 aa10.98□□□□□ -0.65
CLN6-223ENST00000637823 OR7G1Q8NGA0 311 aa10.98□□□□□ -0.65
CLN6-223ENST00000637823 WDR36Q8NI36 951 aaKnown RBP10.98□□□□□ -0.65
CLN6-223ENST00000637823 FBXO30Q8TB52 745 aa10.98□□□□□ -0.65
CLN6-223ENST00000637823 PTPMT1Q8WUK0 201 aaPredicted RBP10.98□□□□□ -0.65
CLN6-223ENST00000637823 RNF31Q96EP0 1072 aa10.98□□□□□ -0.65
CLN6-223ENST00000637823 SLC35A4Q96G79 324 aa10.98□□□□□ -0.65
CLN6-223ENST00000637823 RNF145Q96MT1 663 aa10.98□□□□□ -0.65
CLN6-223ENST00000637823 ULBP3Q9BZM4 244 aa10.98□□□□□ -0.65
CLN6-223ENST00000637823 WDR54Q9H977 334 aa10.98□□□□□ -0.65
CLN6-223ENST00000637823 ADAP2Q9NPF8 381 aa10.98□□□□□ -0.65
CLN6-223ENST00000637823 EQTNQ9NQ60 294 aa10.98□□□□□ -0.65
CLN6-223ENST00000637823 EXD2Q9NVH0 621 aa10.98□□□□□ -0.65
CLN6-223ENST00000637823 ADPRHL2Q9NX46 363 aa10.98□□□□□ -0.65
CLN6-223ENST00000637823 GIN1Q9NXP7 522 aa10.98□□□□□ -0.65
CLN6-223ENST00000637823 CALML5Q9NZT1 146 aa10.98□□□□□ -0.65
CLN6-223ENST00000637823 PCDHGB3Q9Y5G1 929 aa10.98□□□□□ -0.65
CLN6-223ENST00000637823 B3GALT1Q9Y5Z6 326 aa10.98□□□□□ -0.65
CLN6-223ENST00000637823 DMDP11532 3685 aa10.97□□□□□ -0.65
CLN6-223ENST00000637823 A0A0G2JPF8 293 aa10.97□□□□□ -0.65
CLN6-223ENST00000637823 TTC36A6NLP5 189 aa10.97□□□□□ -0.65
CLN6-223ENST00000637823 C17orf105B2RV13 164 aa10.97□□□□□ -0.65
CLN6-223ENST00000637823 HNRNPCL2B2RXH8 293 aa10.97□□□□□ -0.65
CLN6-223ENST00000637823 HNRNPCL3B7ZW38 293 aa10.97□□□□□ -0.65
CLN6-223ENST00000637823 PRAMEF2O60811 474 aa10.97□□□□□ -0.65
CLN6-223ENST00000637823 PDE9AO76083 593 aa10.97□□□□□ -0.65
CLN6-223ENST00000637823 PRKD3O94806 890 aa10.97□□□□□ -0.65
CLN6-223ENST00000637823 BCHEP06276 602 aa10.97□□□□□ -0.65
CLN6-223ENST00000637823 CD63P08962 238 aa10.97□□□□□ -0.65
CLN6-223ENST00000637823 FTH1P19P0C7X4 201 aa10.97□□□□□ -0.65
CLN6-223ENST00000637823 HNRNPCL4P0DMR1 293 aa10.97□□□□□ -0.65
CLN6-223ENST00000637823 GCKP35557 465 aa10.97□□□□□ -0.65
CLN6-223ENST00000637823 MAP3K8P41279 467 aa10.97□□□□□ -0.65
CLN6-223ENST00000637823 EMP2P54851 167 aa10.97□□□□□ -0.65
CLN6-223ENST00000637823 CLDN6P56747 220 aa10.97□□□□□ -0.65
CLN6-223ENST00000637823 PCBP3P57721 371 aaKnown RBP10.97□□□□□ -0.65
CLN6-223ENST00000637823 MAPK11Q15759 364 aa10.97□□□□□ -0.65
CLN6-223ENST00000637823 SYPL1Q16563 259 aa10.97□□□□□ -0.65
CLN6-223ENST00000637823 LRRC23Q53EV4 343 aaPredicted RBP10.97□□□□□ -0.65
CLN6-223ENST00000637823 TBCELQ5QJ74 424 aa10.97□□□□□ -0.65
CLN6-223ENST00000637823 LCN10Q6JVE6 187 aa10.97□□□□□ -0.65
CLN6-223ENST00000637823 MRPL14Q6P1L8 145 aaKnown RBP10.97□□□□□ -0.65
CLN6-223ENST00000637823 CBLL1Q75N03 491 aa10.97□□□□□ -0.65
CLN6-223ENST00000637823 PRSS58Q8IYP2 241 aa10.97□□□□□ -0.65
CLN6-223ENST00000637823 SLC16A11Q8NCK7 471 aa10.97□□□□□ -0.65
CLN6-223ENST00000637823 SIMC1Q8NDZ2 872 aa10.97□□□□□ -0.65
CLN6-223ENST00000637823 OR52R1Q8NGF1 315 aa10.97□□□□□ -0.65
CLN6-223ENST00000637823 OR5D16Q8NGK9 328 aa10.97□□□□□ -0.65
CLN6-223ENST00000637823 OR14A16Q8NHC5 309 aa10.97□□□□□ -0.65
CLN6-223ENST00000637823 DOK4Q8TEW6 326 aa10.97□□□□□ -0.65
CLN6-223ENST00000637823 METTL21AQ8WXB1 218 aa10.97□□□□□ -0.65
CLN6-223ENST00000637823 SLC9A6Q92581 669 aa10.97□□□□□ -0.65
CLN6-223ENST00000637823 HOXB13Q92826 284 aaPredicted RBP10.97□□□□□ -0.65
CLN6-223ENST00000637823 DAZLQ92904 295 aaKnown RBP10.97□□□□□ -0.65
CLN6-223ENST00000637823 MR1Q95460 341 aa10.97□□□□□ -0.65
CLN6-223ENST00000637823 TSLPQ969D9 159 aa10.97□□□□□ -0.65
CLN6-223ENST00000637823 TMEM19Q96HH6 336 aa10.97□□□□□ -0.65
CLN6-223ENST00000637823 SENP5Q96HI0 755 aaPredicted RBP10.97□□□□□ -0.65
CLN6-223ENST00000637823 PYURFQ96I23 114 aa10.97□□□□□ -0.65
CLN6-223ENST00000637823 ART5Q96L15 291 aa10.97□□□□□ -0.65
CLN6-223ENST00000637823 TRNT1Q96Q11 434 aaKnown RBP10.97□□□□□ -0.65
CLN6-223ENST00000637823 ZNF607Q96SK3 696 aa10.97□□□□□ -0.65
CLN6-223ENST00000637823 STACQ99469 402 aa10.97□□□□□ -0.65
CLN6-223ENST00000637823 B3GNT4Q9C0J1 378 aa10.97□□□□□ -0.65
CLN6-223ENST00000637823 PIGUQ9H490 435 aa10.97□□□□□ -0.65
CLN6-223ENST00000637823 MAGIXQ9H6Y5 334 aa10.97□□□□□ -0.65
CLN6-223ENST00000637823 YY1AP1Q9H869 796 aa10.97□□□□□ -0.65
CLN6-223ENST00000637823 BCL2L10Q9HD36 194 aa10.97□□□□□ -0.65
CLN6-223ENST00000637823 DUSP22Q9NRW4 184 aa10.97□□□□□ -0.65
CLN6-223ENST00000637823 C6orf203Q9P0P8 240 aaPredicted RBP10.97□□□□□ -0.65
CLN6-223ENST00000637823 STOML1Q9UBI4 398 aa10.97□□□□□ -0.65
CLN6-223ENST00000637823 PISDQ9UG56 409 aa10.97□□□□□ -0.65
CLN6-223ENST00000637823 NXT1Q9UKK6 140 aaKnown RBP10.97□□□□□ -0.65
CLN6-223ENST00000637823 AURKCQ9UQB9 309 aa10.97□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms