RNA–Protein interactions for RNA: ENST00000637774.1

CACNA1A-248, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 3,381 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-248ENST00000637774 MAT2BQ9NZL9 334 aa9.11□□□□□ -0.95
CACNA1A-248ENST00000637774 EHD3Q9NZN3 535 aa9.11□□□□□ -0.95
CACNA1A-248ENST00000637774 NTNG1Q9Y2I2 539 aa9.11□□□□□ -0.95
CACNA1A-248ENST00000637774 PADI2Q9Y2J8 665 aa9.11□□□□□ -0.95
CACNA1A-248ENST00000637774 PRAMEF25A6NGN4 478 aa9.1□□□□□ -0.95
CACNA1A-248ENST00000637774 MFN2O95140 757 aa9.1□□□□□ -0.95
CACNA1A-248ENST00000637774 NTN1O95631 604 aa9.1□□□□□ -0.95
CACNA1A-248ENST00000637774 DCNP07585 359 aaKnown RBP9.1□□□□□ -0.95
CACNA1A-248ENST00000637774 TFPTP0C1Z6 253 aa9.1□□□□□ -0.95
CACNA1A-248ENST00000637774 ENTPD1P49961 510 aa9.1□□□□□ -0.95
CACNA1A-248ENST00000637774 PCBP4P57723 403 aaKnown RBP9.1□□□□□ -0.95
CACNA1A-248ENST00000637774 YPEL5P62699 121 aa9.1□□□□□ -0.95
CACNA1A-248ENST00000637774 PCDH1Q08174 1060 aa9.1□□□□□ -0.95
CACNA1A-248ENST00000637774 MAP4K2Q12851 820 aa9.1□□□□□ -0.95
CACNA1A-248ENST00000637774 PTGES3Q15185 160 aaKnown RBP9.1□□□□□ -0.95
CACNA1A-248ENST00000637774 PTCRAQ6ISU1 281 aaPredicted RBP9.1□□□□□ -0.95
CACNA1A-248ENST00000637774 KLHL35Q6PF15 583 aa9.1□□□□□ -0.95
CACNA1A-248ENST00000637774 TSPYL5Q86VY4 417 aaPredicted RBP9.1□□□□□ -0.95
CACNA1A-248ENST00000637774 NATD1Q8N6N6 113 aa9.1□□□□□ -0.95
CACNA1A-248ENST00000637774 OR56A1Q8NGH5 318 aa9.1□□□□□ -0.95
CACNA1A-248ENST00000637774 MAP3K3Q99759 626 aa9.1□□□□□ -0.95
CACNA1A-248ENST00000637774 YTHDF1Q9BYJ9 559 aaKnown RBP9.1□□□□□ -0.95
CACNA1A-248ENST00000637774 SERHL2Q9H4I8 314 aa9.1□□□□□ -0.95
CACNA1A-248ENST00000637774 TAS2R16Q9NYV7 291 aa9.1□□□□□ -0.95
CACNA1A-248ENST00000637774 SLC6A14Q9UN76 642 aa9.1□□□□□ -0.95
CACNA1A-248ENST00000637774 RNF6Q9Y252 685 aa9.1□□□□□ -0.95
CACNA1A-248ENST00000637774 ALPK3Q96L96 1907 aa9.1□□□□□ -0.95
CACNA1A-248ENST00000637774 LAMA1P25391 3075 aa9.1□□□□□ -0.95
CACNA1A-248ENST00000637774 KRBA1A5PL33 1030 aa9.1□□□□□ -0.95
CACNA1A-248ENST00000637774 RHPN2P1A8MT19 583 aa9.1□□□□□ -0.95
CACNA1A-248ENST00000637774 J3QRK9 145 aa9.1□□□□□ -0.95
CACNA1A-248ENST00000637774 PROM1O43490 865 aa9.1□□□□□ -0.95
CACNA1A-248ENST00000637774 TLX2O43763 284 aaPredicted RBP9.1□□□□□ -0.95
CACNA1A-248ENST00000637774 CNOT3O75175 753 aaKnown RBP9.1□□□□□ -0.95
CACNA1A-248ENST00000637774 IGHV4-34P06331 123 aa9.1□□□□□ -0.95
CACNA1A-248ENST00000637774 CTSBP07858 339 aa9.1□□□□□ -0.95
CACNA1A-248ENST00000637774 CHRM4P08173 479 aa9.1□□□□□ -0.95
CACNA1A-248ENST00000637774 GKN3PP0CG01 181 aa9.1□□□□□ -0.95
CACNA1A-248ENST00000637774 LSSP48449 732 aa9.1□□□□□ -0.95
CACNA1A-248ENST00000637774 AGERQ15109 404 aa9.1□□□□□ -0.95
CACNA1A-248ENST00000637774 SNAPC1Q16533 368 aa9.1□□□□□ -0.95
CACNA1A-248ENST00000637774 TCTN3Q6NUS6 607 aa9.1□□□□□ -0.95
CACNA1A-248ENST00000637774 PIWIL3Q7Z3Z3 882 aaKnown RBP9.1□□□□□ -0.95
CACNA1A-248ENST00000637774 PAQR7Q86WK9 346 aa9.1□□□□□ -0.95
CACNA1A-248ENST00000637774 SLC34A3Q8N130 599 aa9.1□□□□□ -0.95
CACNA1A-248ENST00000637774 GPR32P1Q8NGA4 272 aa9.1□□□□□ -0.95
CACNA1A-248ENST00000637774 ELP4Q96EB1 424 aa9.1□□□□□ -0.95
CACNA1A-248ENST00000637774 MMABQ96EY8 250 aaPredicted RBP9.1□□□□□ -0.95
CACNA1A-248ENST00000637774 EPYCQ99645 322 aa9.1□□□□□ -0.95
CACNA1A-248ENST00000637774 CNIH4Q9P003 139 aa9.1□□□□□ -0.95
CACNA1A-248ENST00000637774 ADAM29Q9UKF5 820 aa9.1□□□□□ -0.95
CACNA1A-248ENST00000637774 TTC28Q96AY4 2481 aa9.1□□□□□ -0.95
CACNA1A-248ENST00000637774 DBTP11182 482 aaKnown RBP9.1□□□□□ -0.95
CACNA1A-248ENST00000637774 CCR4P51679 360 aa9.1□□□□□ -0.95
CACNA1A-248ENST00000637774 C21orf58P58505 322 aa9.1□□□□□ -0.95
CACNA1A-248ENST00000637774 E2F2Q14209 437 aa9.1□□□□□ -0.95
CACNA1A-248ENST00000637774 GNA13Q14344 377 aa9.1□□□□□ -0.95
CACNA1A-248ENST00000637774 SMARCD3Q6STE5 483 aa9.1□□□□□ -0.95
CACNA1A-248ENST00000637774 TRIM69Q86WT6 500 aa9.1□□□□□ -0.95
CACNA1A-248ENST00000637774 ERI1Q8IV48 349 aaKnown RBP9.1□□□□□ -0.95
CACNA1A-248ENST00000637774 ENTHD1Q8IYW4 607 aa9.1□□□□□ -0.95
CACNA1A-248ENST00000637774 DEPDC4Q8N2C3 294 aa9.1□□□□□ -0.95
CACNA1A-248ENST00000637774 SVOPQ8N4V2 548 aa9.1□□□□□ -0.95
CACNA1A-248ENST00000637774 PJA1Q8NG27 643 aa9.1□□□□□ -0.95
CACNA1A-248ENST00000637774 OR7G2Q8NG99 324 aa9.1□□□□□ -0.95
CACNA1A-248ENST00000637774 OR4K5Q8NGD3 323 aa9.1□□□□□ -0.95
CACNA1A-248ENST00000637774 UCK2Q9BZX2 261 aa9.1□□□□□ -0.95
CACNA1A-248ENST00000637774 EPB41L1Q9H4G0 881 aa9.1□□□□□ -0.95
CACNA1A-248ENST00000637774 FAM60AQ9NP50 221 aa9.1□□□□□ -0.95
CACNA1A-248ENST00000637774 TMEM74BQ9NUR3 256 aa9.1□□□□□ -0.95
CACNA1A-248ENST00000637774 PAK1IP1Q9NWT1 392 aaPredicted RBP9.1□□□□□ -0.95
CACNA1A-248ENST00000637774 CLN6Q9NWW5 311 aa9.1□□□□□ -0.95
CACNA1A-248ENST00000637774 PHF11Q9UIL8 331 aa9.1□□□□□ -0.95
CACNA1A-248ENST00000637774 WBP11Q9Y2W2 641 aaKnown RBP9.1□□□□□ -0.95
CACNA1A-248ENST00000637774 OR10H1Q9Y4A9 318 aa9.1□□□□□ -0.95
CACNA1A-248ENST00000637774 MDC1Q14676 2089 aaKnown RBP9.09□□□□□ -0.95
CACNA1A-248ENST00000637774 SPTY2D1-AS1A0A0U1RR47 76 aa9.09□□□□□ -0.95
CACNA1A-248ENST00000637774 SLC16A6O15403 523 aa9.09□□□□□ -0.95
CACNA1A-248ENST00000637774 HCRTR1O43613 425 aa9.09□□□□□ -0.95
CACNA1A-248ENST00000637774 PFDN1O60925 122 aa9.09□□□□□ -0.95
CACNA1A-248ENST00000637774 CKMT1AP12532 417 aa9.09□□□□□ -0.95
CACNA1A-248ENST00000637774 PORP16435 677 aaPredicted RBP9.09□□□□□ -0.95
CACNA1A-248ENST00000637774 CD36P16671 472 aa9.09□□□□□ -0.95
CACNA1A-248ENST00000637774 CD38P28907 300 aa9.09□□□□□ -0.95
CACNA1A-248ENST00000637774 GABRA3P34903 492 aa9.09□□□□□ -0.95
CACNA1A-248ENST00000637774 ST3GAL4Q11206 333 aa9.09□□□□□ -0.95
CACNA1A-248ENST00000637774 EIF2B5Q13144 721 aaKnown RBP9.09□□□□□ -0.95
CACNA1A-248ENST00000637774 FZD2Q14332 565 aa9.09□□□□□ -0.95
CACNA1A-248ENST00000637774 FAM214AQ32MH5 1076 aa9.09□□□□□ -0.95
CACNA1A-248ENST00000637774 ZNF425Q6IV72 752 aa9.09□□□□□ -0.95
CACNA1A-248ENST00000637774 GATAD2AQ86YP4 633 aa9.09□□□□□ -0.95
CACNA1A-248ENST00000637774 OR52P1PQ8NH57 321 aa9.09□□□□□ -0.95
CACNA1A-248ENST00000637774 WDR36Q8NI36 951 aaKnown RBP9.09□□□□□ -0.95
CACNA1A-248ENST00000637774 SLC7A13Q8TCU3 470 aa9.09□□□□□ -0.95
CACNA1A-248ENST00000637774 GRHL3Q8TE85 626 aa9.09□□□□□ -0.95
CACNA1A-248ENST00000637774 RASSF5Q8WWW0 418 aa9.09□□□□□ -0.95
CACNA1A-248ENST00000637774 SLC38A4Q969I6 547 aa9.09□□□□□ -0.95
CACNA1A-248ENST00000637774 TBC1D20Q96BZ9 403 aa9.09□□□□□ -0.95
CACNA1A-248ENST00000637774 DNAJA3Q96EY1 480 aa9.09□□□□□ -0.95
CACNA1A-248ENST00000637774 ZNF354BQ96LW1 612 aa9.09□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms