RNA–Protein interactions for RNA: ENST00000637494.1

CLN6-221, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5 BASIC

Gene CLN6, Length 765 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-221ENST00000637494 PPICP45877 212 aa17.38■□□□□ 0.37
CLN6-221ENST00000637494 ZFP36L2P47974 494 aaKnown RBP17.38■□□□□ 0.37
CLN6-221ENST00000637494 NAGLUP54802 743 aa17.38■□□□□ 0.37
CLN6-221ENST00000637494 PSPHP78330 225 aa17.38■□□□□ 0.37
CLN6-221ENST00000637494 MGAT2Q10469 447 aa17.38■□□□□ 0.37
CLN6-221ENST00000637494 TRMT12Q53H54 448 aaKnown RBP17.38■□□□□ 0.37
CLN6-221ENST00000637494 CDC26Q8NHZ8 85 aa17.38■□□□□ 0.37
CLN6-221ENST00000637494 ZNF675Q8TD23 568 aa17.38■□□□□ 0.37
CLN6-221ENST00000637494 CTHRC1Q96CG8 243 aa17.38■□□□□ 0.37
CLN6-221ENST00000637494 OMA1Q96E52 524 aa17.38■□□□□ 0.37
CLN6-221ENST00000637494 DTNBP1Q96EV8 351 aa17.38■□□□□ 0.37
CLN6-221ENST00000637494 APIPQ96GX9 242 aa17.38■□□□□ 0.37
CLN6-221ENST00000637494 ZNF681Q96N22 645 aa17.38■□□□□ 0.37
CLN6-221ENST00000637494 BBS4Q96RK4 519 aa17.38■□□□□ 0.37
CLN6-221ENST00000637494 KCNA7Q96RP8 456 aa17.38■□□□□ 0.37
CLN6-221ENST00000637494 TRIM8Q9BZR9 551 aa17.38■□□□□ 0.37
CLN6-221ENST00000637494 IQCGQ9H095 443 aaKnown RBP17.38■□□□□ 0.37
CLN6-221ENST00000637494 ENKD1Q9H0I2 346 aa17.38■□□□□ 0.37
CLN6-221ENST00000637494 SLC6A15Q9H2J7 730 aa17.38■□□□□ 0.37
CLN6-221ENST00000637494 RRAGDQ9NQL2 400 aaPredicted RBP17.38■□□□□ 0.37
CLN6-221ENST00000637494 EHD3Q9NZN3 535 aa17.38■□□□□ 0.37
CLN6-221ENST00000637494 HEY2Q9UBP5 337 aa17.38■□□□□ 0.37
CLN6-221ENST00000637494 DTX4Q9Y2E6 619 aa17.38■□□□□ 0.37
CLN6-221ENST00000637494 CENPEQ02224 2701 aa17.38■□□□□ 0.37
CLN6-221ENST00000637494 NKX2-6A6NCS4 301 aa17.37■□□□□ 0.37
CLN6-221ENST00000637494 PLIN3O60664 434 aa17.37■□□□□ 0.37
CLN6-221ENST00000637494 CBX7O95931 251 aa17.37■□□□□ 0.37
CLN6-221ENST00000637494 SHBGP04278 402 aa17.37■□□□□ 0.37
CLN6-221ENST00000637494 GLI4P10075 376 aa17.37■□□□□ 0.37
CLN6-221ENST00000637494 CPA3P15088 417 aa17.37■□□□□ 0.37
CLN6-221ENST00000637494 PCSK2P16519 638 aa17.37■□□□□ 0.37
CLN6-221ENST00000637494 DRD5P21918 477 aa17.37■□□□□ 0.37
CLN6-221ENST00000637494 DNAJB13P59910 316 aa17.37■□□□□ 0.37
CLN6-221ENST00000637494 RAE1P78406 368 aaKnown RBP17.37■□□□□ 0.37
CLN6-221ENST00000637494 ZNF763Q0D2J5 394 aa17.37■□□□□ 0.37
CLN6-221ENST00000637494 DUSP8Q13202 625 aa17.37■□□□□ 0.37
CLN6-221ENST00000637494 LTB4RQ15722 352 aa17.37■□□□□ 0.37
CLN6-221ENST00000637494 BICRALQ6AI39 1079 aa17.37■□□□□ 0.37
CLN6-221ENST00000637494 SLC30A6Q6NXT4 461 aa17.37■□□□□ 0.37
CLN6-221ENST00000637494 FAM180BQ6P0A1 224 aa17.37■□□□□ 0.37
CLN6-221ENST00000637494 GALNT18Q6P9A2 607 aa17.37■□□□□ 0.37
CLN6-221ENST00000637494 SCIMPQ6UWF3 145 aa17.37■□□□□ 0.37
CLN6-221ENST00000637494 FRMD7Q6ZUT3 714 aa17.37■□□□□ 0.37
CLN6-221ENST00000637494 PM20D2Q8IYS1 436 aa17.37■□□□□ 0.37
CLN6-221ENST00000637494 FAM9CQ8IZT9 166 aa17.37■□□□□ 0.37
CLN6-221ENST00000637494 OR1J4Q8NGS1 313 aa17.37■□□□□ 0.37
CLN6-221ENST00000637494 TMCO6Q96DC7 493 aa17.37■□□□□ 0.37
CLN6-221ENST00000637494 TMEM41AQ96HV5 264 aa17.37■□□□□ 0.37
CLN6-221ENST00000637494 OSBPL11Q9BXB4 747 aa17.37■□□□□ 0.37
CLN6-221ENST00000637494 EBPLQ9BY08 206 aa17.37■□□□□ 0.37
CLN6-221ENST00000637494 SLC24A3Q9HC58 644 aa17.37■□□□□ 0.37
CLN6-221ENST00000637494 MIEF1Q9NQG6 463 aa17.37■□□□□ 0.37
CLN6-221ENST00000637494 SLC35C2Q9NQQ7 365 aa17.37■□□□□ 0.37
CLN6-221ENST00000637494 SIRT5Q9NXA8 310 aa17.37■□□□□ 0.37
CLN6-221ENST00000637494 KLRF1Q9NZS2 232 aa17.37■□□□□ 0.37
CLN6-221ENST00000637494 SPRR3Q9UBC9 169 aa17.37■□□□□ 0.37
CLN6-221ENST00000637494 EMCNQ9ULC0 261 aa17.37■□□□□ 0.37
CLN6-221ENST00000637494 C15orf41Q9Y2V0 281 aa17.37■□□□□ 0.37
CLN6-221ENST00000637494 FAM215AQ9Y5M1 114 aa17.37■□□□□ 0.37
CLN6-221ENST00000637494 FRG2CA6NGY1 282 aa17.36■□□□□ 0.37
CLN6-221ENST00000637494 KRT4P19013 534 aa17.36■□□□□ 0.37
CLN6-221ENST00000637494 ENDOUP21128 410 aaKnown RBP17.36■□□□□ 0.37
CLN6-221ENST00000637494 CDK9P50750 372 aaKnown RBP17.36■□□□□ 0.37
CLN6-221ENST00000637494 MRPS35P82673 323 aaKnown RBP17.36■□□□□ 0.37
CLN6-221ENST00000637494 DUSP2Q05923 314 aa17.36■□□□□ 0.37
CLN6-221ENST00000637494 C2orf80Q0P641 193 aa17.36■□□□□ 0.37
CLN6-221ENST00000637494 SNTA1Q13424 505 aa17.36■□□□□ 0.37
CLN6-221ENST00000637494 FAM219BQ5XKK7 198 aa17.36■□□□□ 0.37
CLN6-221ENST00000637494 TMEM81Q6P7N7 255 aa17.36■□□□□ 0.37
CLN6-221ENST00000637494 HOMEZQ8IX15 550 aa17.36■□□□□ 0.37
CLN6-221ENST00000637494 CLYBLQ8N0X4 340 aa17.36■□□□□ 0.37
CLN6-221ENST00000637494 LRRN4CLQ8ND94 238 aa17.36■□□□□ 0.37
CLN6-221ENST00000637494 C14orf79Q96F83 325 aa17.36■□□□□ 0.37
CLN6-221ENST00000637494 LURAP1Q96LR2 239 aa17.36■□□□□ 0.37
CLN6-221ENST00000637494 UCK2Q9BZX2 261 aa17.36■□□□□ 0.37
CLN6-221ENST00000637494 STMN4Q9H169 189 aaPredicted RBP17.36■□□□□ 0.37
CLN6-221ENST00000637494 OXSMQ9NWU1 459 aa17.36■□□□□ 0.37
CLN6-221ENST00000637494 AHRRA9YTQ3 701 aa17.35■□□□□ 0.37
CLN6-221ENST00000637494 GNB5O14775 395 aa17.35■□□□□ 0.37
CLN6-221ENST00000637494 ABCB7O75027 752 aa17.35■□□□□ 0.37
CLN6-221ENST00000637494 REM1O75628 298 aa17.35■□□□□ 0.37
CLN6-221ENST00000637494 HPNP05981 417 aa17.35■□□□□ 0.37
CLN6-221ENST00000637494 UROSP10746 265 aa17.35■□□□□ 0.37
CLN6-221ENST00000637494 DDCP20711 480 aa17.35■□□□□ 0.37
CLN6-221ENST00000637494 EMDP50402 254 aa17.35■□□□□ 0.37
CLN6-221ENST00000637494 ZNF628Q5EBL2 1059 aa17.35■□□□□ 0.37
CLN6-221ENST00000637494 RIPPLY2Q5TAB7 128 aa17.35■□□□□ 0.37
CLN6-221ENST00000637494 LIPMQ5VYY2 423 aa17.35■□□□□ 0.37
CLN6-221ENST00000637494 ANGPTL8Q6UXH0 198 aa17.35■□□□□ 0.37
CLN6-221ENST00000637494 ULK2Q8IYT8 1036 aa17.35■□□□□ 0.37
CLN6-221ENST00000637494 OR9A2Q8NGT5 310 aa17.35■□□□□ 0.37
CLN6-221ENST00000637494 FAM76AQ8TAV0 307 aa17.35■□□□□ 0.37
CLN6-221ENST00000637494 EPS8L3Q8TE67 593 aaKnown RBP17.35■□□□□ 0.37
CLN6-221ENST00000637494 KAT2AQ92830 837 aa17.35■□□□□ 0.37
CLN6-221ENST00000637494 LRRC46Q96FV0 321 aa17.35■□□□□ 0.37
CLN6-221ENST00000637494 GNRHR2Q96P88 292 aa17.35■□□□□ 0.37
CLN6-221ENST00000637494 L2HGDHQ9H9P8 463 aa17.35■□□□□ 0.37
CLN6-221ENST00000637494 TAS2R9Q9NYW1 312 aa17.35■□□□□ 0.37
CLN6-221ENST00000637494 WBP11Q9Y2W2 641 aaKnown RBP17.35■□□□□ 0.37
CLN6-221ENST00000637494 ITPR2Q14571 2701 aa17.35■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms