RNA–Protein interactions for RNA: ENST00000636214.1

PNKP-225, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 805 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-225ENST00000636214 HSPB2A8KAH6 182 aa16.42■□□□□ 0.22
PNKP-225ENST00000636214 AHRRA9YTQ3 701 aa16.42■□□□□ 0.22
PNKP-225ENST00000636214 GNB5O14775 395 aa16.42■□□□□ 0.22
PNKP-225ENST00000636214 IL3P08700 152 aa16.42■□□□□ 0.22
PNKP-225ENST00000636214 MYL2P10916 166 aa16.42■□□□□ 0.22
PNKP-225ENST00000636214 PYGBP11216 843 aa16.42■□□□□ 0.22
PNKP-225ENST00000636214 DRD2P14416 443 aa16.42■□□□□ 0.22
PNKP-225ENST00000636214 GCAP28676 217 aa16.42■□□□□ 0.22
PNKP-225ENST00000636214 CASP3P42574 277 aa16.42■□□□□ 0.22
PNKP-225ENST00000636214 PRKAA2P54646 552 aa16.42■□□□□ 0.22
PNKP-225ENST00000636214 NAA20P61599 178 aa16.42■□□□□ 0.22
PNKP-225ENST00000636214 SLC29A2Q14542 456 aa16.42■□□□□ 0.22
PNKP-225ENST00000636214 HSPB2Q16082 182 aa16.42■□□□□ 0.22
PNKP-225ENST00000636214 IMPG1Q17R60 797 aa16.42■□□□□ 0.22
PNKP-225ENST00000636214 RTL6Q6ICC9 239 aa16.42■□□□□ 0.22
PNKP-225ENST00000636214 NUP54Q7Z3B4 507 aa16.42■□□□□ 0.22
PNKP-225ENST00000636214 MMP21Q8N119 569 aa16.42■□□□□ 0.22
PNKP-225ENST00000636214 ACBD4Q8NC06 268 aa16.42■□□□□ 0.22
PNKP-225ENST00000636214 OR1J4Q8NGS1 313 aa16.42■□□□□ 0.22
PNKP-225ENST00000636214 OMA1Q96E52 524 aa16.42■□□□□ 0.22
PNKP-225ENST00000636214 TMEM41AQ96HV5 264 aa16.42■□□□□ 0.22
PNKP-225ENST00000636214 TREX2Q9BQ50 279 aaPredicted RBP16.42■□□□□ 0.22
PNKP-225ENST00000636214 OSBPL11Q9BXB4 747 aa16.42■□□□□ 0.22
PNKP-225ENST00000636214 NPDC1Q9NQX5 325 aaPredicted RBP16.42■□□□□ 0.22
PNKP-225ENST00000636214 Q9UFV3 132 aa16.42■□□□□ 0.22
PNKP-225ENST00000636214 DTX4Q9Y2E6 619 aa16.42■□□□□ 0.22
PNKP-225ENST00000636214 C15orf41Q9Y2V0 281 aa16.42■□□□□ 0.22
PNKP-225ENST00000636214 PLLPQ9Y342 182 aa16.42■□□□□ 0.22
PNKP-225ENST00000636214 ANKHD1Q8IWZ3 2542 aaKnown RBP16.42■□□□□ 0.22
PNKP-225ENST00000636214 OTOGQ6ZRI0 2925 aa16.42■□□□□ 0.22
PNKP-225ENST00000636214 F8P00451 2351 aa16.41■□□□□ 0.22
PNKP-225ENST00000636214 GLRA3O75311 464 aa16.41■□□□□ 0.22
PNKP-225ENST00000636214 ABCB1P08183 1280 aaPredicted RBP16.41■□□□□ 0.22
PNKP-225ENST00000636214 IGFBP2P18065 325 aa16.41■□□□□ 0.22
PNKP-225ENST00000636214 S1PR1P21453 382 aa16.41■□□□□ 0.22
PNKP-225ENST00000636214 KRT20P35900 424 aa16.41■□□□□ 0.22
PNKP-225ENST00000636214 GSTM5P46439 218 aa16.41■□□□□ 0.22
PNKP-225ENST00000636214 CDK9P50750 372 aaKnown RBP16.41■□□□□ 0.22
PNKP-225ENST00000636214 BTKQ06187 659 aa16.41■□□□□ 0.22
PNKP-225ENST00000636214 TFF3Q07654 80 aa16.41■□□□□ 0.22
PNKP-225ENST00000636214 CFAP157Q5JU67 520 aa16.41■□□□□ 0.22
PNKP-225ENST00000636214 SLC30A6Q6NXT4 461 aa16.41■□□□□ 0.22
PNKP-225ENST00000636214 ANGPTL8Q6UXH0 198 aa16.41■□□□□ 0.22
PNKP-225ENST00000636214 CDH24Q86UP0 819 aa16.41■□□□□ 0.22
PNKP-225ENST00000636214 TMEM200AQ86VY9 491 aa16.41■□□□□ 0.22
PNKP-225ENST00000636214 DMRTC2Q8IXT2 367 aaPredicted RBP16.41■□□□□ 0.22
PNKP-225ENST00000636214 CCDC63Q8NA47 563 aa16.41■□□□□ 0.22
PNKP-225ENST00000636214 CDC26Q8NHZ8 85 aa16.41■□□□□ 0.22
PNKP-225ENST00000636214 EXOSC8Q96B26 276 aaKnown RBP16.41■□□□□ 0.22
PNKP-225ENST00000636214 TMCO6Q96DC7 493 aa16.41■□□□□ 0.22
PNKP-225ENST00000636214 ERP27Q96DN0 273 aa16.41■□□□□ 0.22
PNKP-225ENST00000636214 L3HYPDHQ96EM0 354 aa16.41■□□□□ 0.22
PNKP-225ENST00000636214 ACPTQ9BZG2 426 aa16.41■□□□□ 0.22
PNKP-225ENST00000636214 MID1IP1Q9NPA3 183 aa16.41■□□□□ 0.22
PNKP-225ENST00000636214 KCNN3Q9UGI6 736 aa16.41■□□□□ 0.22
PNKP-225ENST00000636214 CAMK2AQ9UQM7 478 aa16.41■□□□□ 0.22
PNKP-225ENST00000636214 PDZD2O15018 2839 aa16.4■□□□□ 0.22
PNKP-225ENST00000636214 DVL2O14641 736 aa16.4■□□□□ 0.22
PNKP-225ENST00000636214 ZWINTO95229 277 aa16.4■□□□□ 0.22
PNKP-225ENST00000636214 CBX7O95931 251 aa16.4■□□□□ 0.22
PNKP-225ENST00000636214 IL2RAP01589 272 aa16.4■□□□□ 0.22
PNKP-225ENST00000636214 HPNP05981 417 aa16.4■□□□□ 0.22
PNKP-225ENST00000636214 PCSK2P16519 638 aa16.4■□□□□ 0.22
PNKP-225ENST00000636214 TIA1P31483 386 aaKnown RBP eCLIP16.4■□□□□ 0.22
PNKP-225ENST00000636214 ADH7P40394 386 aa16.4■□□□□ 0.22
PNKP-225ENST00000636214 PEX19P40855 299 aa16.4■□□□□ 0.22
PNKP-225ENST00000636214 PSPHP78330 225 aa16.4■□□□□ 0.22
PNKP-225ENST00000636214 MRPS35P82673 323 aaKnown RBP16.4■□□□□ 0.22
PNKP-225ENST00000636214 HMGCS1Q01581 520 aa16.4■□□□□ 0.22
PNKP-225ENST00000636214 LTB4RQ15722 352 aa16.4■□□□□ 0.22
PNKP-225ENST00000636214 TRMT12Q53H54 448 aaKnown RBP16.4■□□□□ 0.22
PNKP-225ENST00000636214 SPDYAQ5MJ70 313 aa16.4■□□□□ 0.22
PNKP-225ENST00000636214 FAM180BQ6P0A1 224 aa16.4■□□□□ 0.22
PNKP-225ENST00000636214 CCDC116Q8IYX3 515 aa16.4■□□□□ 0.22
PNKP-225ENST00000636214 ZNF675Q8TD23 568 aa16.4■□□□□ 0.22
PNKP-225ENST00000636214 CNRIP1Q96F85 164 aaPredicted RBP16.4■□□□□ 0.22
PNKP-225ENST00000636214 GNRHR2Q96P88 292 aa16.4■□□□□ 0.22
PNKP-225ENST00000636214 BBS4Q96RK4 519 aa16.4■□□□□ 0.22
PNKP-225ENST00000636214 EBPLQ9BY08 206 aa16.4■□□□□ 0.22
PNKP-225ENST00000636214 SHCBP1LQ9BZQ2 653 aa16.4■□□□□ 0.22
PNKP-225ENST00000636214 PRAMEF25A6NGN4 478 aa16.39■□□□□ 0.21
PNKP-225ENST00000636214 FRG2CA6NGY1 282 aa16.39■□□□□ 0.21
PNKP-225ENST00000636214 H3BQF6 201 aa16.39■□□□□ 0.21
PNKP-225ENST00000636214 ABCB7O75027 752 aa16.39■□□□□ 0.21
PNKP-225ENST00000636214 REM1O75628 298 aa16.39■□□□□ 0.21
PNKP-225ENST00000636214 ANXA4P09525 319 aaPredicted RBP16.39■□□□□ 0.21
PNKP-225ENST00000636214 FAM153BP0C7A2 387 aa16.39■□□□□ 0.21
PNKP-225ENST00000636214 CHN1P15882 459 aa16.39■□□□□ 0.21
PNKP-225ENST00000636214 IL12BP29460 328 aa16.39■□□□□ 0.21
PNKP-225ENST00000636214 PPICP45877 212 aa16.39■□□□□ 0.21
PNKP-225ENST00000636214 HTR6P50406 440 aa16.39■□□□□ 0.21
PNKP-225ENST00000636214 CRYZQ08257 329 aaKnown RBP16.39■□□□□ 0.21
PNKP-225ENST00000636214 MGAT2Q10469 447 aa16.39■□□□□ 0.21
PNKP-225ENST00000636214 SNTA1Q13424 505 aa16.39■□□□□ 0.21
PNKP-225ENST00000636214 FAM153CQ494X1 144 aa16.39■□□□□ 0.21
PNKP-225ENST00000636214 TIGD3Q6B0B8 471 aa16.39■□□□□ 0.21
PNKP-225ENST00000636214 LACC1Q8IV20 430 aa16.39■□□□□ 0.21
PNKP-225ENST00000636214 FAM9CQ8IZT9 166 aa16.39■□□□□ 0.21
PNKP-225ENST00000636214 C16orf78Q8WTQ4 265 aa16.39■□□□□ 0.21
PNKP-225ENST00000636214 UBLCP1Q8WVY7 318 aaPredicted RBP16.39■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms