RNA–Protein interactions for RNA: ENST00000636020.1

CLN6-212, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2

Gene CLN6, Length 894 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-212ENST00000636020 LIPNQ5VXI9 398 aa16.31■□□□□ 0.2
CLN6-212ENST00000636020 OR4C11Q6IEV9 310 aa16.31■□□□□ 0.2
CLN6-212ENST00000636020 RAD9BQ6WBX8 426 aa16.31■□□□□ 0.2
CLN6-212ENST00000636020 PLCZ1Q86YW0 608 aa16.31■□□□□ 0.2
CLN6-212ENST00000636020 EFCAB11Q9BUY7 163 aa16.31■□□□□ 0.2
CLN6-212ENST00000636020 NXF5Q9H1B4 397 aaKnown RBP16.31■□□□□ 0.2
CLN6-212ENST00000636020 KLRF1Q9NZS2 232 aa16.31■□□□□ 0.2
CLN6-212ENST00000636020 PHF11Q9UIL8 331 aa16.31■□□□□ 0.2
CLN6-212ENST00000636020 FBXL2Q9UKC9 423 aa16.31■□□□□ 0.2
CLN6-212ENST00000636020 CAPN6Q9Y6Q1 641 aa16.31■□□□□ 0.2
CLN6-212ENST00000636020 MALRD1Q5VYJ5 2156 aa16.31■□□□□ 0.2
CLN6-212ENST00000636020 DYSFO75923 2080 aa16.31■□□□□ 0.2
CLN6-212ENST00000636020 FAM234BA2RU67 622 aa16.3■□□□□ 0.2
CLN6-212ENST00000636020 SAP18O00422 153 aaKnown RBP16.3■□□□□ 0.2
CLN6-212ENST00000636020 ZIC3O60481 467 aa16.3■□□□□ 0.2
CLN6-212ENST00000636020 TNFRSF21O75509 655 aa16.3■□□□□ 0.2
CLN6-212ENST00000636020 TGFB1P01137 390 aa16.3■□□□□ 0.2
CLN6-212ENST00000636020 CNTFP26441 200 aa16.3■□□□□ 0.2
CLN6-212ENST00000636020 CASP2P42575 452 aa16.3■□□□□ 0.2
CLN6-212ENST00000636020 FAPQ12884 760 aa16.3■□□□□ 0.2
CLN6-212ENST00000636020 BHLHB9Q6PI77 547 aa16.3■□□□□ 0.2
CLN6-212ENST00000636020 GALNT7Q86SF2 657 aa16.3■□□□□ 0.2
CLN6-212ENST00000636020 CNTN4Q8IWV2 1026 aa16.3■□□□□ 0.2
CLN6-212ENST00000636020 RNF214Q8ND24 703 aa16.3■□□□□ 0.2
CLN6-212ENST00000636020 NEUROG1Q92886 237 aa16.3■□□□□ 0.2
CLN6-212ENST00000636020 OR10A5Q9H207 317 aa16.3■□□□□ 0.2
CLN6-212ENST00000636020 PLSCR4Q9NRQ2 329 aa16.3■□□□□ 0.2
CLN6-212ENST00000636020 DNAJC11Q9NVH1 559 aa16.3■□□□□ 0.2
CLN6-212ENST00000636020 RNF115Q9Y4L5 304 aa16.3■□□□□ 0.2
CLN6-212ENST00000636020 CADP27708 2225 aa16.29■□□□□ 0.2
CLN6-212ENST00000636020 A0A1W2PP18 115 aa16.29■□□□□ 0.2
CLN6-212ENST00000636020 PRAMEF25A6NGN4 478 aa16.29■□□□□ 0.2
CLN6-212ENST00000636020 TAPBPO15533 448 aa16.29■□□□□ 0.2
CLN6-212ENST00000636020 SSX4O60224 188 aa16.29■□□□□ 0.2
CLN6-212ENST00000636020 LMX1BO60663 402 aa16.29■□□□□ 0.2
CLN6-212ENST00000636020 CT62P0C5K7 136 aa16.29■□□□□ 0.2
CLN6-212ENST00000636020 PEPDP12955 493 aa16.29■□□□□ 0.2
CLN6-212ENST00000636020 ZNF37AP17032 561 aaPredicted RBP16.29■□□□□ 0.2
CLN6-212ENST00000636020 B3GALT5-AS1P59052 145 aa16.29■□□□□ 0.2
CLN6-212ENST00000636020 LAPTM5Q13571 262 aa16.29■□□□□ 0.2
CLN6-212ENST00000636020 CRYMQ14894 314 aa16.29■□□□□ 0.2
CLN6-212ENST00000636020 CYP1B1Q16678 543 aa16.29■□□□□ 0.2
CLN6-212ENST00000636020 PGGHGQ32M88 737 aa16.29■□□□□ 0.2
CLN6-212ENST00000636020 CYB5R2Q6BCY4 276 aa16.29■□□□□ 0.2
CLN6-212ENST00000636020 FAM45BPQ6NSW5 357 aa16.29■□□□□ 0.2
CLN6-212ENST00000636020 DNAJC14Q6Y2X3 702 aaPredicted RBP16.29■□□□□ 0.2
CLN6-212ENST00000636020 FAM214BQ7L5A3 538 aa16.29■□□□□ 0.2
CLN6-212ENST00000636020 UBQLNLQ8IYU4 475 aa16.29■□□□□ 0.2
CLN6-212ENST00000636020 FNDC9Q8TBE3 224 aa16.29■□□□□ 0.2
CLN6-212ENST00000636020 FAM45AQ8TCE6 357 aa16.29■□□□□ 0.2
CLN6-212ENST00000636020 C11orf24Q96F05 449 aaPredicted RBP16.29■□□□□ 0.2
CLN6-212ENST00000636020 GRPEL1Q9HAV7 217 aa16.29■□□□□ 0.2
CLN6-212ENST00000636020 SLC17A6Q9P2U8 582 aa16.29■□□□□ 0.2
CLN6-212ENST00000636020 ZKSCAN5Q9Y2L8 839 aa16.29■□□□□ 0.2
CLN6-212ENST00000636020 ZNF175Q9Y473 711 aa16.29■□□□□ 0.2
CLN6-212ENST00000636020 A0A1W2PS29 197 aa16.28■□□□□ 0.2
CLN6-212ENST00000636020 GLOD5A6NK44 160 aa16.28■□□□□ 0.2
CLN6-212ENST00000636020 ELOA3DA6NLF2 546 aaPredicted RBP16.28■□□□□ 0.2
CLN6-212ENST00000636020 UBFD1O14562 309 aaKnown RBP16.28■□□□□ 0.2
CLN6-212ENST00000636020 UGT2B11O75310 529 aa16.28■□□□□ 0.2
CLN6-212ENST00000636020 CD8AP01732 235 aa16.28■□□□□ 0.2
CLN6-212ENST00000636020 GPX3P22352 226 aa16.28■□□□□ 0.2
CLN6-212ENST00000636020 TCEA1P23193 301 aaKnown RBP16.28■□□□□ 0.2
CLN6-212ENST00000636020 IGFBP5P24593 272 aa16.28■□□□□ 0.2
CLN6-212ENST00000636020 BUD31P41223 144 aaPredicted RBP16.28■□□□□ 0.2
CLN6-212ENST00000636020 TSNQ15631 228 aaKnown RBP16.28■□□□□ 0.2
CLN6-212ENST00000636020 ELOA3BQ3SY89 546 aa16.28■□□□□ 0.2
CLN6-212ENST00000636020 PAGE2BQ5JRK9 111 aa16.28■□□□□ 0.2
CLN6-212ENST00000636020 DEPDC1Q5TB30 811 aa16.28■□□□□ 0.2
CLN6-212ENST00000636020 KHDRBS2Q5VWX1 349 aaKnown RBP16.28■□□□□ 0.2
CLN6-212ENST00000636020 MEX3DQ86XN8 651 aaKnown RBP16.28■□□□□ 0.2
CLN6-212ENST00000636020 ELOA3Q8NG57 546 aa16.28■□□□□ 0.2
CLN6-212ENST00000636020 OMA1Q96E52 524 aa16.28■□□□□ 0.2
CLN6-212ENST00000636020 TMEM79Q9BSE2 394 aa16.28■□□□□ 0.2
CLN6-212ENST00000636020 TRAF4Q9BUZ4 470 aaPredicted RBP16.28■□□□□ 0.2
CLN6-212ENST00000636020 NTMT1Q9BV86 223 aa16.28■□□□□ 0.2
CLN6-212ENST00000636020 PINK1Q9BXM7 581 aa16.28■□□□□ 0.2
CLN6-212ENST00000636020 ACTR6Q9GZN1 396 aa16.28■□□□□ 0.2
CLN6-212ENST00000636020 ADAM19Q9H013 955 aa16.28■□□□□ 0.2
CLN6-212ENST00000636020 OR10A4Q9H209 315 aa16.28■□□□□ 0.2
CLN6-212ENST00000636020 OR51B5Q9H339 312 aa16.28■□□□□ 0.2
CLN6-212ENST00000636020 CORO1CQ9ULV4 474 aaPredicted RBP16.28■□□□□ 0.2
CLN6-212ENST00000636020 A0A1W2PR48 441 aa16.27■□□□□ 0.2
CLN6-212ENST00000636020 H0YC42 278 aa16.27■□□□□ 0.2
CLN6-212ENST00000636020 CLOCKO15516 846 aa16.27■□□□□ 0.2
CLN6-212ENST00000636020 GGT5P36269 586 aa16.27■□□□□ 0.2
CLN6-212ENST00000636020 SUCLG1P53597 346 aaKnown RBP16.27■□□□□ 0.2
CLN6-212ENST00000636020 TPD52P55327 224 aaPredicted RBP16.27■□□□□ 0.2
CLN6-212ENST00000636020 HMGCS1Q01581 520 aa16.27■□□□□ 0.2
CLN6-212ENST00000636020 NNATQ16517 81 aa16.27■□□□□ 0.2
CLN6-212ENST00000636020 HIST2H2ACQ16777 129 aaPredicted RBP16.27■□□□□ 0.2
CLN6-212ENST00000636020 ZNF672Q499Z4 452 aaPredicted RBP16.27■□□□□ 0.2
CLN6-212ENST00000636020 NCMAPQ5T1S8 102 aa16.27■□□□□ 0.2
CLN6-212ENST00000636020 HIST2H2AA3Q6FI13 130 aa16.27■□□□□ 0.2
CLN6-212ENST00000636020 IL17RELQ6ZVW7 336 aa16.27■□□□□ 0.2
CLN6-212ENST00000636020 FRA10AC1Q70Z53 315 aa16.27■□□□□ 0.2
CLN6-212ENST00000636020 ADAMTSL2Q86TH1 951 aa16.27■□□□□ 0.2
CLN6-212ENST00000636020 GALNT12Q8IXK2 581 aa16.27■□□□□ 0.2
CLN6-212ENST00000636020 ZCCHC7Q8N3Z6 543 aaKnown RBP16.27■□□□□ 0.2
CLN6-212ENST00000636020 NKAPQ8N5F7 415 aaKnown RBP16.27■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms