RNA–Protein interactions for RNA: ENST00000634433.1

BRCA1-230, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 2,534 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-230ENST00000634433 C6orf106Q9H6K1 298 aaPredicted RBP6.75□□□□□ -1.33
BRCA1-230ENST00000634433 C3orf14Q9HBI5 128 aa6.75□□□□□ -1.33
BRCA1-230ENST00000634433 SLAMF7Q9NQ25 335 aa6.75□□□□□ -1.33
BRCA1-230ENST00000634433 GLRX2Q9NS18 164 aa6.75□□□□□ -1.33
BRCA1-230ENST00000634433 EXD2Q9NVH0 621 aa6.75□□□□□ -1.33
BRCA1-230ENST00000634433 QPCTLQ9NXS2 382 aa6.75□□□□□ -1.33
BRCA1-230ENST00000634433 VNN3Q9NY84 501 aa6.75□□□□□ -1.33
BRCA1-230ENST00000634433 WSB2Q9NYS7 404 aaPredicted RBP6.75□□□□□ -1.33
BRCA1-230ENST00000634433 PTTG2Q9NZH5 202 aa6.75□□□□□ -1.33
BRCA1-230ENST00000634433 NDUFAF4Q9P032 175 aa6.75□□□□□ -1.33
BRCA1-230ENST00000634433 P2RX2Q9UBL9 471 aa6.75□□□□□ -1.33
BRCA1-230ENST00000634433 MALT1Q9UDY8 824 aa6.75□□□□□ -1.33
BRCA1-230ENST00000634433 PHF11Q9UIL8 331 aa6.75□□□□□ -1.33
BRCA1-230ENST00000634433 RAB23Q9ULC3 237 aa6.75□□□□□ -1.33
BRCA1-230ENST00000634433 KLK4Q9Y5K2 254 aa6.75□□□□□ -1.33
BRCA1-230ENST00000634433 ZNF780BQ9Y6R6 833 aa6.75□□□□□ -1.33
BRCA1-230ENST00000634433 HEATR5BQ9P2D3 2071 aa6.75□□□□□ -1.33
BRCA1-230ENST00000634433 TRBV23OR9-2A0A075B6M9 112 aa6.74□□□□□ -1.33
BRCA1-230ENST00000634433 A0A0G2JN53 185 aa6.74□□□□□ -1.33
BRCA1-230ENST00000634433 OR2A25A4D2G3 310 aa6.74□□□□□ -1.33
BRCA1-230ENST00000634433 ZNF701M0R085 212 aaPredicted RBP6.74□□□□□ -1.33
BRCA1-230ENST00000634433 BTN3A3O00478 584 aa6.74□□□□□ -1.33
BRCA1-230ENST00000634433 VILLO15195 856 aa6.74□□□□□ -1.33
BRCA1-230ENST00000634433 NARSO43776 548 aaKnown RBP6.74□□□□□ -1.33
BRCA1-230ENST00000634433 DNAJB5O75953 348 aa6.74□□□□□ -1.33
BRCA1-230ENST00000634433 EML2O95834 649 aa6.74□□□□□ -1.33
BRCA1-230ENST00000634433 IGHV4-34P06331 123 aa6.74□□□□□ -1.33
BRCA1-230ENST00000634433 RRM2P31350 389 aa6.74□□□□□ -1.33
BRCA1-230ENST00000634433 BUD31P41223 144 aaPredicted RBP6.74□□□□□ -1.33
BRCA1-230ENST00000634433 CASP9P55211 416 aa6.74□□□□□ -1.33
BRCA1-230ENST00000634433 CDH15P55291 814 aa6.74□□□□□ -1.33
BRCA1-230ENST00000634433 SMIM11AP58511 58 aa6.74□□□□□ -1.33
BRCA1-230ENST00000634433 PRR5P85299 388 aa6.74□□□□□ -1.33
BRCA1-230ENST00000634433 PPP1R8Q12972 351 aaKnown RBP6.74□□□□□ -1.33
BRCA1-230ENST00000634433 IQCCQ4KMZ1 466 aa6.74□□□□□ -1.33
BRCA1-230ENST00000634433 KRBOX4Q5JUW0 171 aa6.74□□□□□ -1.33
BRCA1-230ENST00000634433 TPRG1LQ5T0D9 272 aa6.74□□□□□ -1.33
BRCA1-230ENST00000634433 FAHD1Q6P587 224 aa6.74□□□□□ -1.33
BRCA1-230ENST00000634433 NLRC3Q7RTR2 1065 aa6.74□□□□□ -1.33
BRCA1-230ENST00000634433 CYP4Z1Q86W10 505 aa6.74□□□□□ -1.33
BRCA1-230ENST00000634433 FAM20CQ8IXL6 584 aa6.74□□□□□ -1.33
BRCA1-230ENST00000634433 PRR18Q8N4B5 295 aa6.74□□□□□ -1.33
BRCA1-230ENST00000634433 HORMAD2Q8N7B1 307 aa6.74□□□□□ -1.33
BRCA1-230ENST00000634433 TTC29Q8NA56 475 aaPredicted RBP6.74□□□□□ -1.33
BRCA1-230ENST00000634433 TSTD1Q8NFU3 115 aa6.74□□□□□ -1.33
BRCA1-230ENST00000634433 PROX1Q92786 737 aa6.74□□□□□ -1.33
BRCA1-230ENST00000634433 MAGED4Q96JG8 741 aa6.74□□□□□ -1.33
BRCA1-230ENST00000634433 OR2A14Q96R47 310 aa6.74□□□□□ -1.33
BRCA1-230ENST00000634433 ZNF300Q96RE9 604 aaPredicted RBP6.74□□□□□ -1.33
BRCA1-230ENST00000634433 PIP5K1AQ99755 562 aa6.74□□□□□ -1.33
BRCA1-230ENST00000634433 RBM38Q9H0Z9 239 aaKnown RBP6.74□□□□□ -1.33
BRCA1-230ENST00000634433 RIBC2Q9H4K1 309 aa6.74□□□□□ -1.33
BRCA1-230ENST00000634433 ZNF556Q9HAH1 456 aa6.74□□□□□ -1.33
BRCA1-230ENST00000634433 CD93Q9NPY3 652 aa6.74□□□□□ -1.33
BRCA1-230ENST00000634433 SIRT3Q9NTG7 399 aaPredicted RBP6.74□□□□□ -1.33
BRCA1-230ENST00000634433 MS4A12Q9NXJ0 267 aa6.74□□□□□ -1.33
BRCA1-230ENST00000634433 CPNE7Q9UBL6 633 aa6.74□□□□□ -1.33
BRCA1-230ENST00000634433 RSL24D1Q9UHA3 163 aaKnown RBP6.74□□□□□ -1.33
BRCA1-230ENST00000634433 FBXW2Q9UKT8 454 aa6.74□□□□□ -1.33
BRCA1-230ENST00000634433 CYP8B1Q9UNU6 501 aa6.74□□□□□ -1.33
BRCA1-230ENST00000634433 PRELID1Q9Y255 219 aa6.74□□□□□ -1.33
BRCA1-230ENST00000634433 GMPPBQ9Y5P6 360 aa6.74□□□□□ -1.33
BRCA1-230ENST00000634433 ENPP4Q9Y6X5 453 aa6.74□□□□□ -1.33
BRCA1-230ENST00000634433 CDH23Q9H251 3354 aa6.74□□□□□ -1.33
BRCA1-230ENST00000634433 TRBV23-1A0A0A0MS06 115 aa6.74□□□□□ -1.33
BRCA1-230ENST00000634433 SPTY2D1-AS1A0A0U1RR47 76 aa6.74□□□□□ -1.33
BRCA1-230ENST00000634433 A0A1W2PR48 441 aa6.74□□□□□ -1.33
BRCA1-230ENST00000634433 GSAPA4D1B5 854 aa6.74□□□□□ -1.33
BRCA1-230ENST00000634433 OR6C74A6NCV1 312 aa6.74□□□□□ -1.33
BRCA1-230ENST00000634433 AP3D1O14617 1153 aa6.74□□□□□ -1.33
BRCA1-230ENST00000634433 SLC28A2O43868 658 aa6.74□□□□□ -1.33
BRCA1-230ENST00000634433 OR6B1O95007 311 aa6.74□□□□□ -1.33
BRCA1-230ENST00000634433 DIRAS1O95057 198 aa6.74□□□□□ -1.33
BRCA1-230ENST00000634433 IFNW1P05000 195 aa6.74□□□□□ -1.33
BRCA1-230ENST00000634433 TFPTP0C1Z6 253 aa6.74□□□□□ -1.33
BRCA1-230ENST00000634433 CHRNB1P11230 501 aa6.74□□□□□ -1.33
BRCA1-230ENST00000634433 UGT2B7P16662 529 aa6.74□□□□□ -1.33
BRCA1-230ENST00000634433 POLR2CP19387 275 aaPredicted RBP6.74□□□□□ -1.33
BRCA1-230ENST00000634433 MATN1P21941 496 aa6.74□□□□□ -1.33
BRCA1-230ENST00000634433 SOX6P35712 828 aa6.74□□□□□ -1.33
BRCA1-230ENST00000634433 CDK9P50750 372 aaKnown RBP6.74□□□□□ -1.33
BRCA1-230ENST00000634433 CRYBA2P53672 197 aa6.74□□□□□ -1.33
BRCA1-230ENST00000634433 CXCR4P61073 352 aa6.74□□□□□ -1.33
BRCA1-230ENST00000634433 CSNK2BP67870 215 aa6.74□□□□□ -1.33
BRCA1-230ENST00000634433 BTN3A2P78410 334 aa6.74□□□□□ -1.33
BRCA1-230ENST00000634433 SPIBQ01892 262 aa6.74□□□□□ -1.33
BRCA1-230ENST00000634433 TP53BP2Q13625 1128 aa6.74□□□□□ -1.33
BRCA1-230ENST00000634433 PRAMEF8Q5VWM4 474 aa6.74□□□□□ -1.33
BRCA1-230ENST00000634433 PRAMEF7Q5VXH5 474 aa6.74□□□□□ -1.33
BRCA1-230ENST00000634433 SLC48A1Q6P1K1 146 aa6.74□□□□□ -1.33
BRCA1-230ENST00000634433 FBXO42Q6P3S6 717 aa6.74□□□□□ -1.33
BRCA1-230ENST00000634433 TNFAIP8L2Q6P589 184 aaPredicted RBP6.74□□□□□ -1.33
BRCA1-230ENST00000634433 ABHD13Q7L211 337 aa6.74□□□□□ -1.33
BRCA1-230ENST00000634433 TAF8Q7Z7C8 310 aa6.74□□□□□ -1.33
BRCA1-230ENST00000634433 TSPYL5Q86VY4 417 aaPredicted RBP6.74□□□□□ -1.33
BRCA1-230ENST00000634433 GALNT15Q8N3T1 639 aa6.74□□□□□ -1.33
BRCA1-230ENST00000634433 AMER3Q8N944 861 aa6.74□□□□□ -1.33
BRCA1-230ENST00000634433 PRSS33Q8NF86 280 aa6.74□□□□□ -1.33
BRCA1-230ENST00000634433 CCL4L1Q8NHW4 92 aa6.74□□□□□ -1.33
BRCA1-230ENST00000634433 SLC38A5Q8WUX1 472 aa6.74□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms