RNA–Protein interactions for RNA: ENST00000629380.2

SYNGAP1-208, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SYNGAP1, Length 9,862 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-208ENST00000629380 TWNKQ96RR1 684 aa12.6□□□□□ -0.39
SYNGAP1-208ENST00000629380 PPA2Q9H2U2 334 aa12.6□□□□□ -0.39
SYNGAP1-208ENST00000629380 GDI1P31150 447 aa12.6□□□□□ -0.39
SYNGAP1-208ENST00000629380 ARL16Q0P5N6 197 aa12.6□□□□□ -0.39
SYNGAP1-208ENST00000629380 PPA1Q15181 289 aa12.6□□□□□ -0.39
SYNGAP1-208ENST00000629380 TMEM173Q86WV6 379 aaPredicted RBP12.6□□□□□ -0.39
SYNGAP1-208ENST00000629380 OR1S1Q8NH92 325 aa12.6□□□□□ -0.39
SYNGAP1-208ENST00000629380 LMX1AQ8TE12 382 aa12.6□□□□□ -0.39
SYNGAP1-208ENST00000629380 DOCK2Q92608 1830 aa12.6□□□□□ -0.39
SYNGAP1-208ENST00000629380 SUOXP51687 545 aa12.6□□□□□ -0.39
SYNGAP1-208ENST00000629380 RPS13P62277 151 aaKnown RBP12.6□□□□□ -0.39
SYNGAP1-208ENST00000629380 OR52E8Q6IFG1 317 aa12.6□□□□□ -0.39
SYNGAP1-208ENST00000629380 GTPBP8Q8N3Z3 284 aaPredicted RBP12.6□□□□□ -0.39
SYNGAP1-208ENST00000629380 SUSD3Q96L08 255 aa12.6□□□□□ -0.39
SYNGAP1-208ENST00000629380 TEX51A0A1B0GUA7 166 aa12.6□□□□□ -0.39
SYNGAP1-208ENST00000629380 A8MT66 165 aa12.6□□□□□ -0.39
SYNGAP1-208ENST00000629380 GSRP00390 522 aa12.6□□□□□ -0.39
SYNGAP1-208ENST00000629380 HMGCS1Q01581 520 aa12.6□□□□□ -0.39
SYNGAP1-208ENST00000629380 CREB3L2Q70SY1 520 aa12.6□□□□□ -0.39
SYNGAP1-208ENST00000629380 RAB7BQ96AH8 199 aa12.6□□□□□ -0.39
SYNGAP1-208ENST00000629380 ZNF286AQ9HBT8 521 aa12.6□□□□□ -0.39
SYNGAP1-208ENST00000629380 H3BSH0 61 aa12.59□□□□□ -0.39
SYNGAP1-208ENST00000629380 OIP5O43482 229 aa12.59□□□□□ -0.39
SYNGAP1-208ENST00000629380 TAS2R39P59534 338 aa12.59□□□□□ -0.39
SYNGAP1-208ENST00000629380 HMGN3Q15651 99 aa12.59□□□□□ -0.39
SYNGAP1-208ENST00000629380 ZNF296Q8WUU4 475 aaPredicted RBP12.59□□□□□ -0.39
SYNGAP1-208ENST00000629380 PWWP2AQ96N64 755 aa12.59□□□□□ -0.39
SYNGAP1-208ENST00000629380 ACTRT3Q9BYD9 372 aa12.59□□□□□ -0.39
SYNGAP1-208ENST00000629380 C10orf71Q711Q0 1435 aa12.59□□□□□ -0.39
SYNGAP1-208ENST00000629380 MYOFQ9NZM1 2061 aa12.59□□□□□ -0.39
SYNGAP1-208ENST00000629380 HTR3AP46098 478 aa12.59□□□□□ -0.39
SYNGAP1-208ENST00000629380 RBM39Q14498 530 aaKnown RBP12.59□□□□□ -0.39
SYNGAP1-208ENST00000629380 LRIT3Q3SXY7 679 aa12.59□□□□□ -0.39
SYNGAP1-208ENST00000629380 COMMD7Q86VX2 200 aa12.59□□□□□ -0.39
SYNGAP1-208ENST00000629380 MAL2Q969L2 176 aa12.59□□□□□ -0.39
SYNGAP1-208ENST00000629380 BIRC7Q96CA5 298 aa12.59□□□□□ -0.39
SYNGAP1-208ENST00000629380 KLHDC7BQ96G42 594 aa12.59□□□□□ -0.39
SYNGAP1-208ENST00000629380 REV1Q9UBZ9 1251 aa12.59□□□□□ -0.39
SYNGAP1-208ENST00000629380 SUSD2Q9UGT4 822 aa12.59□□□□□ -0.39
SYNGAP1-208ENST00000629380 DOCK10Q96BY6 2186 aa12.59□□□□□ -0.39
SYNGAP1-208ENST00000629380 MC3RP41968 323 aa12.59□□□□□ -0.39
SYNGAP1-208ENST00000629380 EEF1A1P68104 462 aaKnown RBP12.59□□□□□ -0.39
SYNGAP1-208ENST00000629380 EEF1A1P5Q5VTE0 462 aa12.59□□□□□ -0.39
SYNGAP1-208ENST00000629380 UNC5DQ6UXZ4 953 aa12.59□□□□□ -0.39
SYNGAP1-208ENST00000629380 SGPP2Q8IWX5 399 aa12.59□□□□□ -0.39
SYNGAP1-208ENST00000629380 BOLLQ8N9W6 283 aaKnown RBP12.59□□□□□ -0.39
SYNGAP1-208ENST00000629380 OR6Q1Q8NGQ2 317 aa12.59□□□□□ -0.39
SYNGAP1-208ENST00000629380 CNOT9Q92600 299 aaKnown RBP12.59□□□□□ -0.39
SYNGAP1-208ENST00000629380 RSC1A1Q92681 617 aa12.59□□□□□ -0.39
SYNGAP1-208ENST00000629380 MCHR1Q99705 422 aa12.59□□□□□ -0.39
SYNGAP1-208ENST00000629380 GCM1Q9NP62 436 aa12.59□□□□□ -0.39
SYNGAP1-208ENST00000629380 A8MVM7 634 aa12.59□□□□□ -0.39
SYNGAP1-208ENST00000629380 EMC8O43402 210 aa12.59□□□□□ -0.39
SYNGAP1-208ENST00000629380 TSPAN6O43657 245 aa12.59□□□□□ -0.39
SYNGAP1-208ENST00000629380 RDH16O75452 317 aa12.59□□□□□ -0.39
SYNGAP1-208ENST00000629380 HTR2BP41595 481 aa12.59□□□□□ -0.39
SYNGAP1-208ENST00000629380 ZNF136P52737 540 aa12.59□□□□□ -0.39
SYNGAP1-208ENST00000629380 IL17AQ16552 155 aa12.59□□□□□ -0.39
SYNGAP1-208ENST00000629380 OR4F3Q6IEY1 312 aa12.59□□□□□ -0.39
SYNGAP1-208ENST00000629380 CHFRQ96EP1 664 aa12.59□□□□□ -0.39
SYNGAP1-208ENST00000629380 PRRT1Q99946 306 aa12.59□□□□□ -0.39
SYNGAP1-208ENST00000629380 P2RY13Q9BPV8 354 aa12.59□□□□□ -0.39
SYNGAP1-208ENST00000629380 BCL7BQ9BQE9 202 aa12.59□□□□□ -0.39
SYNGAP1-208ENST00000629380 HINT2Q9BX68 163 aa12.59□□□□□ -0.39
SYNGAP1-208ENST00000629380 ASF1BQ9NVP2 202 aa12.59□□□□□ -0.39
SYNGAP1-208ENST00000629380 PLEKHM1Q9Y4G2 1056 aa12.59□□□□□ -0.39
SYNGAP1-208ENST00000629380 ANKRD36A6QL64 1941 aa12.59□□□□□ -0.39
SYNGAP1-208ENST00000629380 PDCD11Q14690 1871 aaKnown RBP12.59□□□□□ -0.39
SYNGAP1-208ENST00000629380 HNRNPA1P09651 372 aaKnown RBP eCLIP12.59□□□□□ -0.39
SYNGAP1-208ENST00000629380 APLNRP35414 380 aa12.59□□□□□ -0.39
SYNGAP1-208ENST00000629380 CMIPQ8IY22 773 aa12.59□□□□□ -0.39
SYNGAP1-208ENST00000629380 HSPE1-MOB4S4R3N1 261 aa12.59□□□□□ -0.39
SYNGAP1-208ENST00000629380 HSFX4A0A1B0GTS1 333 aaPredicted RBP12.59□□□□□ -0.39
SYNGAP1-208ENST00000629380 HSFX3A0A1B0GWH4 333 aaPredicted RBP12.59□□□□□ -0.39
SYNGAP1-208ENST00000629380 MSMO1Q15800 293 aa12.59□□□□□ -0.39
SYNGAP1-208ENST00000629380 MMABQ96EY8 250 aaPredicted RBP12.59□□□□□ -0.39
SYNGAP1-208ENST00000629380 CENPOQ9BU64 300 aa12.59□□□□□ -0.39
SYNGAP1-208ENST00000629380 PCDHAC1Q9H158 963 aa12.59□□□□□ -0.39
SYNGAP1-208ENST00000629380 ATG4BQ9Y4P1 393 aa12.59□□□□□ -0.39
SYNGAP1-208ENST00000629380 UGT3A2Q3SY77 523 aa12.59□□□□□ -0.39
SYNGAP1-208ENST00000629380 ZNF695Q8IW36 515 aa12.59□□□□□ -0.39
SYNGAP1-208ENST00000629380 CADP27708 2225 aa12.59□□□□□ -0.39
SYNGAP1-208ENST00000629380 HOXB2P14652 356 aa12.58□□□□□ -0.39
SYNGAP1-208ENST00000629380 PROZP22891 400 aa12.58□□□□□ -0.39
SYNGAP1-208ENST00000629380 DCP2Q8IU60 420 aaKnown RBP12.58□□□□□ -0.39
SYNGAP1-208ENST00000629380 FNDC9Q8TBE3 224 aa12.58□□□□□ -0.39
SYNGAP1-208ENST00000629380 SCLYQ96I15 445 aa12.58□□□□□ -0.39
SYNGAP1-208ENST00000629380 IL23AQ9NPF7 189 aa12.58□□□□□ -0.39
SYNGAP1-208ENST00000629380 TUBG2Q9NRH3 451 aa12.58□□□□□ -0.39
SYNGAP1-208ENST00000629380 CCM2LQ9NUG4 571 aaPredicted RBP12.58□□□□□ -0.39
SYNGAP1-208ENST00000629380 A0A0G2JN53 185 aa12.58□□□□□ -0.4
SYNGAP1-208ENST00000629380 NPC1O15118 1278 aa12.58□□□□□ -0.4
SYNGAP1-208ENST00000629380 CRTAPO75718 401 aaPredicted RBP12.58□□□□□ -0.4
SYNGAP1-208ENST00000629380 SYN1P17600 705 aa12.58□□□□□ -0.4
SYNGAP1-208ENST00000629380 LSSP48449 732 aa12.58□□□□□ -0.4
SYNGAP1-208ENST00000629380 MEGF11A6BM72 1044 aa12.58□□□□□ -0.4
SYNGAP1-208ENST00000629380 INPPL1O15357 1258 aa12.58□□□□□ -0.4
SYNGAP1-208ENST00000629380 UBL4AP11441 157 aa12.58□□□□□ -0.4
SYNGAP1-208ENST00000629380 GABRA3P34903 492 aa12.58□□□□□ -0.4
SYNGAP1-208ENST00000629380 RPL23AP62750 156 aaKnown RBP12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms