RNA–Protein interactions for RNA: ENST00000626948.2

SOX2-OT-241, SOX2 overlapping transcript, humanhuman

TSL 5

Gene SOX2-OT, Length 836 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-241ENST00000626948 TMEM41AQ96HV5 264 aa12.34□□□□□ -0.43
SOX2-OT-241ENST00000626948 KCNA7Q96RP8 456 aa12.34□□□□□ -0.43
SOX2-OT-241ENST00000626948 G6PC3Q9BUM1 346 aa12.34□□□□□ -0.43
SOX2-OT-241ENST00000626948 ACPTQ9BZG2 426 aa12.34□□□□□ -0.43
SOX2-OT-241ENST00000626948 BRINP2Q9C0B6 783 aa12.34□□□□□ -0.43
SOX2-OT-241ENST00000626948 ELOVL6Q9H5J4 265 aa12.34□□□□□ -0.43
SOX2-OT-241ENST00000626948 BRF2Q9HAW0 419 aa12.34□□□□□ -0.43
SOX2-OT-241ENST00000626948 CRIM1Q9NZV1 1036 aa12.34□□□□□ -0.43
SOX2-OT-241ENST00000626948 MTRF1LQ9UGC7 380 aaKnown RBP12.34□□□□□ -0.43
SOX2-OT-241ENST00000626948 TRPS1Q9UHF7 1281 aa12.34□□□□□ -0.43
SOX2-OT-241ENST00000626948 TMCO1Q9UM00 188 aa12.34□□□□□ -0.43
SOX2-OT-241ENST00000626948 PCNX3Q9H6A9 2034 aa12.33□□□□□ -0.43
SOX2-OT-241ENST00000626948 AHRRA9YTQ3 701 aa12.33□□□□□ -0.44
SOX2-OT-241ENST00000626948 TP53I11O14683 189 aa12.33□□□□□ -0.44
SOX2-OT-241ENST00000626948 ICOSLGO75144 302 aa12.33□□□□□ -0.44
SOX2-OT-241ENST00000626948 TRAPPC6AO75865 159 aa12.33□□□□□ -0.44
SOX2-OT-241ENST00000626948 KRT38O76015 456 aa12.33□□□□□ -0.44
SOX2-OT-241ENST00000626948 SNX4O95219 450 aa12.33□□□□□ -0.44
SOX2-OT-241ENST00000626948 OTCP00480 354 aa12.33□□□□□ -0.44
SOX2-OT-241ENST00000626948 FAM153BP0C7A2 387 aa12.33□□□□□ -0.44
SOX2-OT-241ENST00000626948 BMP5P22003 454 aa12.33□□□□□ -0.44
SOX2-OT-241ENST00000626948 CNTFP26441 200 aa12.33□□□□□ -0.44
SOX2-OT-241ENST00000626948 AGFG1P52594 562 aaKnown RBP12.33□□□□□ -0.44
SOX2-OT-241ENST00000626948 FOXA1P55317 472 aa12.33□□□□□ -0.44
SOX2-OT-241ENST00000626948 MYBPHQ13203 477 aa12.33□□□□□ -0.44
SOX2-OT-241ENST00000626948 FAM153CQ494X1 144 aa12.33□□□□□ -0.44
SOX2-OT-241ENST00000626948 ZNF628Q5EBL2 1059 aa12.33□□□□□ -0.44
SOX2-OT-241ENST00000626948 C10orf62Q5T681 223 aaPredicted RBP12.33□□□□□ -0.44
SOX2-OT-241ENST00000626948 HLA-DQA1Q5Y7H0 255 aa12.33□□□□□ -0.44
SOX2-OT-241ENST00000626948 NPSR1Q6W5P4 371 aa12.33□□□□□ -0.44
SOX2-OT-241ENST00000626948 PAGE2Q7Z2X7 111 aa12.33□□□□□ -0.44
SOX2-OT-241ENST00000626948 YRDCQ86U90 279 aaKnown RBP12.33□□□□□ -0.44
SOX2-OT-241ENST00000626948 TMEM200AQ86VY9 491 aa12.33□□□□□ -0.44
SOX2-OT-241ENST00000626948 CLYBLQ8N0X4 340 aa12.33□□□□□ -0.44
SOX2-OT-241ENST00000626948 FAM83FQ8NEG4 500 aaPredicted RBP12.33□□□□□ -0.44
SOX2-OT-241ENST00000626948 OR52R1Q8NGF1 315 aa12.33□□□□□ -0.44
SOX2-OT-241ENST00000626948 OMA1Q96E52 524 aa12.33□□□□□ -0.44
SOX2-OT-241ENST00000626948 APIPQ96GX9 242 aa12.33□□□□□ -0.44
SOX2-OT-241ENST00000626948 GPATCH1Q9BRR8 931 aaKnown RBP12.33□□□□□ -0.44
SOX2-OT-241ENST00000626948 TXLNGYQ9BZA5 131 aa12.33□□□□□ -0.44
SOX2-OT-241ENST00000626948 AHSPQ9NZD4 102 aa12.33□□□□□ -0.44
SOX2-OT-241ENST00000626948 EMCNQ9ULC0 261 aa12.33□□□□□ -0.44
SOX2-OT-241ENST00000626948 NFU1Q9UMS0 254 aa12.33□□□□□ -0.44
SOX2-OT-241ENST00000626948 UBFD1O14562 309 aaKnown RBP12.32□□□□□ -0.44
SOX2-OT-241ENST00000626948 SNPHO15079 494 aa12.32□□□□□ -0.44
SOX2-OT-241ENST00000626948 IL3P08700 152 aa12.32□□□□□ -0.44
SOX2-OT-241ENST00000626948 SNRPAP09012 282 aaKnown RBP12.32□□□□□ -0.44
SOX2-OT-241ENST00000626948 CT45A8P0DMV1 189 aa12.32□□□□□ -0.44
SOX2-OT-241ENST00000626948 CT45A9P0DMV2 189 aa12.32□□□□□ -0.44
SOX2-OT-241ENST00000626948 NAGAP17050 411 aa12.32□□□□□ -0.44
SOX2-OT-241ENST00000626948 CSNK2A2P19784 350 aaPredicted RBP12.32□□□□□ -0.44
SOX2-OT-241ENST00000626948 TIMP3P35625 211 aa12.32□□□□□ -0.44
SOX2-OT-241ENST00000626948 CORO7P57737 925 aa12.32□□□□□ -0.44
SOX2-OT-241ENST00000626948 HMGCS1Q01581 520 aa12.32□□□□□ -0.44
SOX2-OT-241ENST00000626948 FOXF2Q12947 444 aa12.32□□□□□ -0.44
SOX2-OT-241ENST00000626948 FBXL19-AS1Q494R0 122 aa12.32□□□□□ -0.44
SOX2-OT-241ENST00000626948 CT45A2Q5DJT8 189 aa12.32□□□□□ -0.44
SOX2-OT-241ENST00000626948 CES4AQ5XG92 561 aa12.32□□□□□ -0.44
SOX2-OT-241ENST00000626948 NSUN5P2Q63ZY6 315 aa12.32□□□□□ -0.44
SOX2-OT-241ENST00000626948 ANGPTL8Q6UXH0 198 aa12.32□□□□□ -0.44
SOX2-OT-241ENST00000626948 ADGRE4PQ86SQ3 457 aa12.32□□□□□ -0.44
SOX2-OT-241ENST00000626948 CCDC116Q8IYX3 515 aa12.32□□□□□ -0.44
SOX2-OT-241ENST00000626948 LIX1Q8N485 282 aa12.32□□□□□ -0.44
SOX2-OT-241ENST00000626948 C9orf106Q8NAJ2 232 aa12.32□□□□□ -0.44
SOX2-OT-241ENST00000626948 RNF138Q8WVD3 245 aa12.32□□□□□ -0.44
SOX2-OT-241ENST00000626948 KLHL29Q96CT2 875 aa12.32□□□□□ -0.44
SOX2-OT-241ENST00000626948 LCORQ96JN0 433 aaPredicted RBP12.32□□□□□ -0.44
SOX2-OT-241ENST00000626948 TNFRSF12AQ9NP84 129 aa12.32□□□□□ -0.44
SOX2-OT-241ENST00000626948 RYDENQ9NUL5 291 aaKnown RBP12.32□□□□□ -0.44
SOX2-OT-241ENST00000626948 JKAMPQ9P055 326 aa12.32□□□□□ -0.44
SOX2-OT-241ENST00000626948 VPS29Q9UBQ0 182 aa12.32□□□□□ -0.44
SOX2-OT-241ENST00000626948 B4GALT7Q9UBV7 327 aa12.32□□□□□ -0.44
SOX2-OT-241ENST00000626948 FETUBQ9UGM5 382 aa12.32□□□□□ -0.44
SOX2-OT-241ENST00000626948 BCAP29Q9UHQ4 241 aa12.32□□□□□ -0.44
SOX2-OT-241ENST00000626948 SNX6Q9UNH7 406 aa12.32□□□□□ -0.44
SOX2-OT-241ENST00000626948 DLGAP4Q9Y2H0 992 aa12.32□□□□□ -0.44
SOX2-OT-241ENST00000626948 GPR55Q9Y2T6 319 aaPredicted RBP12.32□□□□□ -0.44
SOX2-OT-241ENST00000626948 TIMM22Q9Y584 194 aa12.32□□□□□ -0.44
SOX2-OT-241ENST00000626948 ACANP16112 2415 aa12.32□□□□□ -0.44
SOX2-OT-241ENST00000626948 MED12LQ86YW9 2145 aa12.32□□□□□ -0.44
SOX2-OT-241ENST00000626948 A0A087WUV0 522 aaPredicted RBP12.31□□□□□ -0.44
SOX2-OT-241ENST00000626948 MBD3L4A6NDZ8 208 aaPredicted RBP12.31□□□□□ -0.44
SOX2-OT-241ENST00000626948 MBD3L3A6NE82 208 aaPredicted RBP12.31□□□□□ -0.44
SOX2-OT-241ENST00000626948 MBD3L5A6NJ08 208 aaPredicted RBP12.31□□□□□ -0.44
SOX2-OT-241ENST00000626948 HSPB2A8KAH6 182 aa12.31□□□□□ -0.44
SOX2-OT-241ENST00000626948 CAPN14A8MX76 684 aa12.31□□□□□ -0.44
SOX2-OT-241ENST00000626948 GOLGA8RI6L899 631 aa12.31□□□□□ -0.44
SOX2-OT-241ENST00000626948 TO15178 435 aa12.31□□□□□ -0.44
SOX2-OT-241ENST00000626948 RIPK2O43353 540 aa12.31□□□□□ -0.44
SOX2-OT-241ENST00000626948 SUPT7LO94864 414 aa12.31□□□□□ -0.44
SOX2-OT-241ENST00000626948 DRD5P21918 477 aa12.31□□□□□ -0.44
SOX2-OT-241ENST00000626948 PPICP45877 212 aa12.31□□□□□ -0.44
SOX2-OT-241ENST00000626948 MASP1P48740 699 aa12.31□□□□□ -0.44
SOX2-OT-241ENST00000626948 ALDH9A1P49189 494 aa12.31□□□□□ -0.44
SOX2-OT-241ENST00000626948 TMED10P49755 219 aaKnown RBP12.31□□□□□ -0.44
SOX2-OT-241ENST00000626948 ART1P52961 327 aa12.31□□□□□ -0.44
SOX2-OT-241ENST00000626948 NRG3P56975 720 aa12.31□□□□□ -0.44
SOX2-OT-241ENST00000626948 CEBPEQ15744 281 aa12.31□□□□□ -0.44
SOX2-OT-241ENST00000626948 HSPB2Q16082 182 aa12.31□□□□□ -0.44
SOX2-OT-241ENST00000626948 TEX35Q5T0J7 233 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms