RNA–Protein interactions for RNA: ENST00000624887.1

PCDHB11-202, Transcript of protocadherin beta 11, humanhuman

TSL 2 BASIC

Gene PCDHB11, Length 1,973 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB11-202ENST00000624887 THEGLP0DJG4 465 aa18.51■□□□□ 0.55
PCDHB11-202ENST00000624887 PSMB9P28065 219 aa18.51■□□□□ 0.55
PCDHB11-202ENST00000624887 TLX1P31314 330 aaPredicted RBP18.51■□□□□ 0.55
PCDHB11-202ENST00000624887 LSSP48449 732 aa18.51■□□□□ 0.55
PCDHB11-202ENST00000624887 XKP51811 444 aa18.51■□□□□ 0.55
PCDHB11-202ENST00000624887 FZD2Q14332 565 aa18.51■□□□□ 0.55
PCDHB11-202ENST00000624887 SPCS2Q15005 226 aa18.51■□□□□ 0.55
PCDHB11-202ENST00000624887 UBE2UQ5VVX9 321 aa18.51■□□□□ 0.55
PCDHB11-202ENST00000624887 NLGN4XQ8N0W4 816 aa18.51■□□□□ 0.55
PCDHB11-202ENST00000624887 FRMD1Q8N878 549 aa18.51■□□□□ 0.55
PCDHB11-202ENST00000624887 OR4K14Q8NGD5 310 aa18.51■□□□□ 0.55
PCDHB11-202ENST00000624887 OR6T1Q8NGN1 323 aa18.51■□□□□ 0.55
PCDHB11-202ENST00000624887 FCGR1BQ92637 280 aa18.51■□□□□ 0.55
PCDHB11-202ENST00000624887 HLA-CQ95604 372 aa18.51■□□□□ 0.55
PCDHB11-202ENST00000624887 RERGQ96A58 199 aaPredicted RBP18.51■□□□□ 0.55
PCDHB11-202ENST00000624887 TRNT1Q96Q11 434 aaKnown RBP18.51■□□□□ 0.55
PCDHB11-202ENST00000624887 SLC38A1Q9H2H9 487 aa18.51■□□□□ 0.55
PCDHB11-202ENST00000624887 HRASLS2Q9NWW9 162 aa18.51■□□□□ 0.55
PCDHB11-202ENST00000624887 WSB2Q9NYS7 404 aaPredicted RBP18.51■□□□□ 0.55
PCDHB11-202ENST00000624887 CALML5Q9NZT1 146 aa18.51■□□□□ 0.55
PCDHB11-202ENST00000624887 TRIOBPQ9H2D6 2365 aa18.51■□□□□ 0.55
PCDHB11-202ENST00000624887 SH3PXD2BA1X283 911 aa18.51■□□□□ 0.55
PCDHB11-202ENST00000624887 H0YGG7 62 aa18.51■□□□□ 0.55
PCDHB11-202ENST00000624887 ZSCAN9O15535 394 aaPredicted RBP18.51■□□□□ 0.55
PCDHB11-202ENST00000624887 MPZL2O60487 215 aa18.51■□□□□ 0.55
PCDHB11-202ENST00000624887 ZBTB11O95625 1053 aaPredicted RBP18.51■□□□□ 0.55
PCDHB11-202ENST00000624887 CDK1P06493 297 aa18.51■□□□□ 0.55
PCDHB11-202ENST00000624887 NR4A1P22736 598 aa18.51■□□□□ 0.55
PCDHB11-202ENST00000624887 ENTPD1P49961 510 aa18.51■□□□□ 0.55
PCDHB11-202ENST00000624887 ARF3P61204 181 aaPredicted RBP18.51■□□□□ 0.55
PCDHB11-202ENST00000624887 ILKQ13418 452 aa18.51■□□□□ 0.55
PCDHB11-202ENST00000624887 LEXMQ3ZCV2 418 aa18.51■□□□□ 0.55
PCDHB11-202ENST00000624887 ZNF542PQ5EBM4 170 aa18.51■□□□□ 0.55
PCDHB11-202ENST00000624887 TMEM236Q5W0B7 351 aa18.51■□□□□ 0.55
PCDHB11-202ENST00000624887 PGBD2Q6P3X8 592 aa18.51■□□□□ 0.55
PCDHB11-202ENST00000624887 TAF8Q7Z7C8 310 aa18.51■□□□□ 0.55
PCDHB11-202ENST00000624887 SFTPA2Q8IWL1 248 aa18.51■□□□□ 0.55
PCDHB11-202ENST00000624887 RBM12BQ8IXT5 1001 aaKnown RBP18.51■□□□□ 0.55
PCDHB11-202ENST00000624887 GPR174Q9BXC1 333 aa18.51■□□□□ 0.55
PCDHB11-202ENST00000624887 AMBNQ9NP70 447 aa18.51■□□□□ 0.55
PCDHB11-202ENST00000624887 GIN1Q9NXP7 522 aa18.51■□□□□ 0.55
PCDHB11-202ENST00000624887 SLC22A7Q9Y694 548 aa18.51■□□□□ 0.55
PCDHB11-202ENST00000624887 A0A0J9YY10 115 aa18.5■□□□□ 0.55
PCDHB11-202ENST00000624887 SLITRK5O94991 958 aa18.5■□□□□ 0.55
PCDHB11-202ENST00000624887 IMPDH2P12268 514 aa18.5■□□□□ 0.55
PCDHB11-202ENST00000624887 PVRP15151 417 aa18.5■□□□□ 0.55
PCDHB11-202ENST00000624887 ALOX12P18054 663 aa18.5■□□□□ 0.55
PCDHB11-202ENST00000624887 UGT2B15P54855 530 aa18.5■□□□□ 0.55
PCDHB11-202ENST00000624887 TBCEQ15813 527 aaPredicted RBP18.5■□□□□ 0.55
PCDHB11-202ENST00000624887 ATAD3BQ5T9A4 648 aa18.5■□□□□ 0.55
PCDHB11-202ENST00000624887 RNF44Q7L0R7 432 aa18.5■□□□□ 0.55
PCDHB11-202ENST00000624887 SYT13Q7L8C5 426 aa18.5■□□□□ 0.55
PCDHB11-202ENST00000624887 HMGN2P46Q86SG4 172 aa18.5■□□□□ 0.55
PCDHB11-202ENST00000624887 OR7G2Q8NG99 324 aa18.5■□□□□ 0.55
PCDHB11-202ENST00000624887 CDX2Q99626 313 aaPredicted RBP18.5■□□□□ 0.55
PCDHB11-202ENST00000624887 FNDC11Q9BVV2 318 aa18.5■□□□□ 0.55
PCDHB11-202ENST00000624887 PLGRKTQ9HBL7 147 aa18.5■□□□□ 0.55
PCDHB11-202ENST00000624887 LYRM4Q9HD34 91 aa18.5■□□□□ 0.55
PCDHB11-202ENST00000624887 SLC6A14Q9UN76 642 aa18.5■□□□□ 0.55
PCDHB11-202ENST00000624887 SYT5O00445 386 aa18.5■□□□□ 0.55
PCDHB11-202ENST00000624887 FOXD2O60548 495 aaPredicted RBP18.5■□□□□ 0.55
PCDHB11-202ENST00000624887 DNAJB6O75190 326 aa18.5■□□□□ 0.55
PCDHB11-202ENST00000624887 CHRNB1P11230 501 aa18.5■□□□□ 0.55
PCDHB11-202ENST00000624887 SRFP11831 508 aa18.5■□□□□ 0.55
PCDHB11-202ENST00000624887 C21orf33P30042 268 aaPredicted RBP18.5■□□□□ 0.55
PCDHB11-202ENST00000624887 CNR2P34972 360 aa18.5■□□□□ 0.55
PCDHB11-202ENST00000624887 NUDT1P36639 197 aa18.5■□□□□ 0.55
PCDHB11-202ENST00000624887 NUDT6P53370 316 aa18.5■□□□□ 0.55
PCDHB11-202ENST00000624887 SIM1P81133 766 aaPredicted RBP18.5■□□□□ 0.55
PCDHB11-202ENST00000624887 MANEAQ5SRI9 462 aa18.5■□□□□ 0.55
PCDHB11-202ENST00000624887 FAM111BQ6SJ93 734 aa18.5■□□□□ 0.55
PCDHB11-202ENST00000624887 USP53Q70EK8 1073 aa18.5■□□□□ 0.55
PCDHB11-202ENST00000624887 P2RY8Q86VZ1 359 aa18.5■□□□□ 0.55
PCDHB11-202ENST00000624887 PRRC1Q96M27 445 aa18.5■□□□□ 0.55
PCDHB11-202ENST00000624887 MS4A4EQ96PG1 132 aa18.5■□□□□ 0.55
PCDHB11-202ENST00000624887 QRSL1Q9H0R6 528 aaKnown RBP18.5■□□□□ 0.55
PCDHB11-202ENST00000624887 SLC2A4RGQ9NR83 387 aa18.5■□□□□ 0.55
PCDHB11-202ENST00000624887 DNAAF2Q9NVR5 837 aaKnown RBP18.5■□□□□ 0.55
PCDHB11-202ENST00000624887 NDOR1Q9UHB4 597 aa18.5■□□□□ 0.55
PCDHB11-202ENST00000624887 PRUNE2Q8WUY3 3088 aa18.49■□□□□ 0.55
PCDHB11-202ENST00000624887 A0A1W2PPC4 97 aa18.49■□□□□ 0.55
PCDHB11-202ENST00000624887 SH3D21A4FU49 640 aa18.49■□□□□ 0.55
PCDHB11-202ENST00000624887 DUXAA6NLW8 204 aa18.49■□□□□ 0.55
PCDHB11-202ENST00000624887 M0R129 80 aa18.49■□□□□ 0.55
PCDHB11-202ENST00000624887 LCKP06239 509 aa18.49■□□□□ 0.55
PCDHB11-202ENST00000624887 CTSEP14091 401 aa18.49■□□□□ 0.55
PCDHB11-202ENST00000624887 POU1F1P28069 291 aa18.49■□□□□ 0.55
PCDHB11-202ENST00000624887 CHRNEQ04844 493 aa18.49■□□□□ 0.55
PCDHB11-202ENST00000624887 C6orf132Q5T0Z8 1188 aa18.49■□□□□ 0.55
PCDHB11-202ENST00000624887 HEPHL1Q6MZM0 1159 aa18.49■□□□□ 0.55
PCDHB11-202ENST00000624887 MFSD12Q6NUT3 480 aa18.49■□□□□ 0.55
PCDHB11-202ENST00000624887 PODNL1Q6PEZ8 512 aa18.49■□□□□ 0.55
PCDHB11-202ENST00000624887 C16orf62Q7Z3J2 963 aa18.49■□□□□ 0.55
PCDHB11-202ENST00000624887 OR2L13Q8N349 312 aa18.49■□□□□ 0.55
PCDHB11-202ENST00000624887 LINC00471Q8N535 108 aa18.49■□□□□ 0.55
PCDHB11-202ENST00000624887 ZNF655Q8N720 491 aaPredicted RBP18.49■□□□□ 0.55
PCDHB11-202ENST00000624887 FAM46DQ8NEK8 389 aa18.49■□□□□ 0.55
PCDHB11-202ENST00000624887 COL26A1Q96A83 441 aa18.49■□□□□ 0.55
PCDHB11-202ENST00000624887 NECTIN3Q9NQS3 549 aa18.49■□□□□ 0.55
PCDHB11-202ENST00000624887 MAN2C1Q9NTJ4 1040 aa18.49■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms