RNA–Protein interactions for RNA: ENST00000622697.4

GABRB3-215, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 5 BASIC

Gene GABRB3, Length 5,876 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-215ENST00000622697 UNC5DQ6UXZ4 953 aa15.33■□□□□ 0.04
GABRB3-215ENST00000622697 LIPIQ6XZB0 460 aa15.33■□□□□ 0.04
GABRB3-215ENST00000622697 TMEM173Q86WV6 379 aaPredicted RBP15.33■□□□□ 0.04
GABRB3-215ENST00000622697 CSNK1A1LQ8N752 337 aa15.33■□□□□ 0.04
GABRB3-215ENST00000622697 ANKLE1Q8NAG6 615 aa15.33■□□□□ 0.04
GABRB3-215ENST00000622697 KLHDC7BQ96G42 594 aa15.33■□□□□ 0.04
GABRB3-215ENST00000622697 SPEF1Q9Y4P9 236 aa15.33■□□□□ 0.04
GABRB3-215ENST00000622697 TRBV2A0A0J9YWF9 115 aa15.33■□□□□ 0.04
GABRB3-215ENST00000622697 C13orf42A0A1B0GVH6 325 aa15.33■□□□□ 0.04
GABRB3-215ENST00000622697 C1SP09871 688 aa15.33■□□□□ 0.04
GABRB3-215ENST00000622697 S100GP29377 79 aa15.33■□□□□ 0.04
GABRB3-215ENST00000622697 RUNX3Q13761 415 aa15.33■□□□□ 0.04
GABRB3-215ENST00000622697 FBXO42Q6P3S6 717 aa15.33■□□□□ 0.04
GABRB3-215ENST00000622697 SLC39A11Q8N1S5 342 aa15.33■□□□□ 0.04
GABRB3-215ENST00000622697 PELI3Q8N2H9 469 aa15.33■□□□□ 0.04
GABRB3-215ENST00000622697 LINC01465Q8N7H1 131 aa15.33■□□□□ 0.04
GABRB3-215ENST00000622697 CYB561A3Q8NBI2 242 aa15.33■□□□□ 0.04
GABRB3-215ENST00000622697 ZNF548Q8NEK5 533 aaPredicted RBP15.33■□□□□ 0.04
GABRB3-215ENST00000622697 OR56A3Q8NH54 315 aa15.33■□□□□ 0.04
GABRB3-215ENST00000622697 AKAP1Q92667 903 aaKnown RBP eCLIP15.33■□□□□ 0.04
GABRB3-215ENST00000622697 C12orf4Q9NQ89 552 aa15.33■□□□□ 0.04
GABRB3-215ENST00000622697 TNRC6CQ9HCJ0 1690 aaKnown RBP15.33■□□□□ 0.04
GABRB3-215ENST00000622697 L7N2F9 121 aa15.33■□□□□ 0.04
GABRB3-215ENST00000622697 SCO2O43819 266 aa15.33■□□□□ 0.04
GABRB3-215ENST00000622697 HBA1P69905 142 aa15.33■□□□□ 0.04
GABRB3-215ENST00000622697 SEC23BQ15437 767 aa15.33■□□□□ 0.04
GABRB3-215ENST00000622697 ASCC1Q8N9N2 400 aaKnown RBP15.33■□□□□ 0.04
GABRB3-215ENST00000622697 DPH1Q9BZG8 443 aa15.33■□□□□ 0.04
GABRB3-215ENST00000622697 NPIPA5A0A0B4J1W7 369 aa15.32■□□□□ 0.04
GABRB3-215ENST00000622697 NPIPA7E9PJI5 369 aa15.32■□□□□ 0.04
GABRB3-215ENST00000622697 UGDHO60701 494 aa15.32■□□□□ 0.04
GABRB3-215ENST00000622697 NPIPA8P0DM63 369 aa15.32■□□□□ 0.04
GABRB3-215ENST00000622697 METTL25Q8N6Q8 603 aa15.32■□□□□ 0.04
GABRB3-215ENST00000622697 HAVCR1Q96D42 359 aa15.32■□□□□ 0.04
GABRB3-215ENST00000622697 SLC41A3Q96GZ6 507 aa15.32■□□□□ 0.04
GABRB3-215ENST00000622697 MMP28Q9H239 520 aa15.32■□□□□ 0.04
GABRB3-215ENST00000622697 GON4LQ3T8J9 2241 aa15.32■□□□□ 0.04
GABRB3-215ENST00000622697 NUMA1Q14980 2115 aa15.32■□□□□ 0.04
GABRB3-215ENST00000622697 SH3D21A4FU49 640 aa15.32■□□□□ 0.04
GABRB3-215ENST00000622697 LDOC1O95751 146 aaPredicted RBP15.32■□□□□ 0.04
GABRB3-215ENST00000622697 CFIP05156 583 aa15.32■□□□□ 0.04
GABRB3-215ENST00000622697 HNRNPA1P09651 372 aaKnown RBP eCLIP15.32■□□□□ 0.04
GABRB3-215ENST00000622697 GGT2P36268 569 aa15.32■□□□□ 0.04
GABRB3-215ENST00000622697 SNRPD2P62316 118 aaKnown RBP15.32■□□□□ 0.04
GABRB3-215ENST00000622697 LEXMQ3ZCV2 418 aa15.32■□□□□ 0.04
GABRB3-215ENST00000622697 GAB3Q8WWW8 586 aa15.32■□□□□ 0.04
GABRB3-215ENST00000622697 SLC17A9Q9BYT1 436 aa15.32■□□□□ 0.04
GABRB3-215ENST00000622697 SLC6A15Q9H2J7 730 aa15.32■□□□□ 0.04
GABRB3-215ENST00000622697 MRPS17Q9Y2R5 130 aaKnown RBP15.32■□□□□ 0.04
GABRB3-215ENST00000622697 WRBO00258 174 aa15.32■□□□□ 0.04
GABRB3-215ENST00000622697 JRKO75564 520 aa15.32■□□□□ 0.04
GABRB3-215ENST00000622697 MAPK14Q16539 360 aa15.32■□□□□ 0.04
GABRB3-215ENST00000622697 TMEM35AQ53FP2 167 aa15.32■□□□□ 0.04
GABRB3-215ENST00000622697 PNCKQ6P2M8 343 aa15.32■□□□□ 0.04
GABRB3-215ENST00000622697 EGFL6Q8IUX8 553 aa15.32■□□□□ 0.04
GABRB3-215ENST00000622697 ANKK1Q8NFD2 765 aa15.32■□□□□ 0.04
GABRB3-215ENST00000622697 CCDC120Q96HB5 630 aa15.32■□□□□ 0.04
GABRB3-215ENST00000622697 TMEM121BQ9BXQ6 578 aaPredicted RBP15.32■□□□□ 0.04
GABRB3-215ENST00000622697 NOP16Q9Y3C1 178 aaKnown RBP15.32■□□□□ 0.04
GABRB3-215ENST00000622697 FAM171A2A8MVW0 826 aa15.32■□□□□ 0.04
GABRB3-215ENST00000622697 CEBPBP17676 345 aa15.32■□□□□ 0.04
GABRB3-215ENST00000622697 COL22A1Q8NFW1 1626 aaPredicted RBP15.32■□□□□ 0.04
GABRB3-215ENST00000622697 AHSA1O95433 338 aa15.32■□□□□ 0.04
GABRB3-215ENST00000622697 DDCP20711 480 aa15.32■□□□□ 0.04
GABRB3-215ENST00000622697 DHPSP49366 369 aaPredicted RBP15.32■□□□□ 0.04
GABRB3-215ENST00000622697 RELAQ04206 551 aa15.32■□□□□ 0.04
GABRB3-215ENST00000622697 DESI1Q6ICB0 168 aa15.32■□□□□ 0.04
GABRB3-215ENST00000622697 ZNF550Q7Z398 422 aa15.32■□□□□ 0.04
GABRB3-215ENST00000622697 CASTOR1Q8WTX7 329 aa15.32■□□□□ 0.04
GABRB3-215ENST00000622697 TGM7Q96PF1 710 aa15.32■□□□□ 0.04
GABRB3-215ENST00000622697 SLC5A12Q1EHB4 618 aa15.31■□□□□ 0.04
GABRB3-215ENST00000622697 LRRC37A5PQ49AS3 106 aa15.31■□□□□ 0.04
GABRB3-215ENST00000622697 PHF19Q5T6S3 580 aa15.31■□□□□ 0.04
GABRB3-215ENST00000622697 DCDC5Q6ZRR9 648 aa15.31■□□□□ 0.04
GABRB3-215ENST00000622697 HTR3DQ70Z44 454 aa15.31■□□□□ 0.04
GABRB3-215ENST00000622697 KCTD9Q7L273 389 aa15.31■□□□□ 0.04
GABRB3-215ENST00000622697 RASGRP3Q8IV61 690 aa15.31■□□□□ 0.04
GABRB3-215ENST00000622697 CCDC107Q8WV48 283 aa15.31■□□□□ 0.04
GABRB3-215ENST00000622697 PEX11GQ96HA9 241 aa15.31■□□□□ 0.04
GABRB3-215ENST00000622697 SERINC1Q9NRX5 453 aa15.31■□□□□ 0.04
GABRB3-215ENST00000622697 SLC7A7Q9UM01 511 aa15.31■□□□□ 0.04
GABRB3-215ENST00000622697 GRXCR2A6NFK2 248 aa15.31■□□□□ 0.04
GABRB3-215ENST00000622697 NUAK1O60285 661 aa15.31■□□□□ 0.04
GABRB3-215ENST00000622697 CDC40O60508 579 aaKnown RBP eCLIP15.31■□□□□ 0.04
GABRB3-215ENST00000622697 FAM219BQ5XKK7 198 aa15.31■□□□□ 0.04
GABRB3-215ENST00000622697 ALG1LQ6GMV1 187 aa15.31■□□□□ 0.04
GABRB3-215ENST00000622697 TTLL10Q6ZVT0 673 aa15.31■□□□□ 0.04
GABRB3-215ENST00000622697 VRK3Q8IV63 474 aa15.31■□□□□ 0.04
GABRB3-215ENST00000622697 GPR78Q96P69 363 aa15.31■□□□□ 0.04
GABRB3-215ENST00000622697 RDH8Q9NYR8 311 aa15.31■□□□□ 0.04
GABRB3-215ENST00000622697 ATXN7L1Q9ULK2 861 aaPredicted RBP15.31■□□□□ 0.04
GABRB3-215ENST00000622697 GKN3PP0CG01 181 aa15.31■□□□□ 0.04
GABRB3-215ENST00000622697 BMPR1AP36894 532 aa15.31■□□□□ 0.04
GABRB3-215ENST00000622697 NR4A2P43354 598 aa15.31■□□□□ 0.04
GABRB3-215ENST00000622697 RPS15AP62244 130 aaKnown RBP15.31■□□□□ 0.04
GABRB3-215ENST00000622697 CBLL1Q75N03 491 aa15.31■□□□□ 0.04
GABRB3-215ENST00000622697 GPAT4Q86UL3 456 aa15.31■□□□□ 0.04
GABRB3-215ENST00000622697 CPOQ8IVL8 374 aa15.31■□□□□ 0.04
GABRB3-215ENST00000622697 THAP4Q8WY91 577 aa15.31■□□□□ 0.04
GABRB3-215ENST00000622697 CCDC115Q96NT0 180 aa15.31■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms