RNA–Protein interactions for RNA: ENST00000622183.1

CPNE3-213, Transcript of copine 3, humanhuman

TSL 3

Gene CPNE3, Length 156 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-213ENST00000622183 FCGR3AP08637 254 aa4□□□□□ -1.77
CPNE3-213ENST00000622183 TNNI3P19429 210 aa4□□□□□ -1.77
CPNE3-213ENST00000622183 ZNF10P21506 573 aaPredicted RBP4□□□□□ -1.77
CPNE3-213ENST00000622183 PAICSP22234 425 aaKnown RBP4□□□□□ -1.77
CPNE3-213ENST00000622183 UCP1P25874 307 aa4□□□□□ -1.77
CPNE3-213ENST00000622183 AXLP30530 894 aa4□□□□□ -1.77
CPNE3-213ENST00000622183 RFC2P35250 354 aa4□□□□□ -1.77
CPNE3-213ENST00000622183 ATP4BP51164 291 aa4□□□□□ -1.77
CPNE3-213ENST00000622183 MRPS6P82932 125 aaKnown RBP4□□□□□ -1.77
CPNE3-213ENST00000622183 ZP4Q12836 540 aa4□□□□□ -1.77
CPNE3-213ENST00000622183 ANKRD55Q3KP44 614 aa4□□□□□ -1.77
CPNE3-213ENST00000622183 DMKNQ6E0U4 476 aaPredicted RBP4□□□□□ -1.77
CPNE3-213ENST00000622183 ABRAXAS1Q6UWZ7 409 aa4□□□□□ -1.77
CPNE3-213ENST00000622183 CATSPER3Q86XQ3 398 aa4□□□□□ -1.77
CPNE3-213ENST00000622183 GCNT2Q8N0V5 402 aa4□□□□□ -1.77
CPNE3-213ENST00000622183 NFAM1Q8NET5 270 aaPredicted RBP4□□□□□ -1.77
CPNE3-213ENST00000622183 NR4A3Q92570 626 aa4□□□□□ -1.77
CPNE3-213ENST00000622183 DLX4Q92988 240 aaPredicted RBP4□□□□□ -1.77
CPNE3-213ENST00000622183 LHX4Q969G2 390 aa4□□□□□ -1.77
CPNE3-213ENST00000622183 BIRC7Q96CA5 298 aa4□□□□□ -1.77
CPNE3-213ENST00000622183 C18orf12Q96KH6 178 aa4□□□□□ -1.77
CPNE3-213ENST00000622183 CHCHD5Q9BSY4 110 aa4□□□□□ -1.77
CPNE3-213ENST00000622183 CABLES2Q9BTV7 478 aa4□□□□□ -1.77
CPNE3-213ENST00000622183 APOOQ9BUR5 198 aa4□□□□□ -1.77
CPNE3-213ENST00000622183 ZNF416Q9BWM5 594 aa4□□□□□ -1.77
CPNE3-213ENST00000622183 MRPL13Q9BYD1 178 aaKnown RBP4□□□□□ -1.77
CPNE3-213ENST00000622183 KRTAP9-8Q9BYQ0 159 aa4□□□□□ -1.77
CPNE3-213ENST00000622183 TUBB1Q9H4B7 451 aa4□□□□□ -1.77
CPNE3-213ENST00000622183 KAT8Q9H7Z6 458 aaKnown RBP4□□□□□ -1.77
CPNE3-213ENST00000622183 JPT2Q9H910 190 aa4□□□□□ -1.77
CPNE3-213ENST00000622183 IL1RL2Q9HB29 575 aa4□□□□□ -1.77
CPNE3-213ENST00000622183 ELL3Q9HB65 397 aaPredicted RBP4□□□□□ -1.77
CPNE3-213ENST00000622183 TAS2R16Q9NYV7 291 aa4□□□□□ -1.77
CPNE3-213ENST00000622183 GTSE1Q9NYZ3 720 aa4□□□□□ -1.77
CPNE3-213ENST00000622183 CTSZQ9UBR2 303 aa4□□□□□ -1.77
CPNE3-213ENST00000622183 ATP6V1HQ9UI12 483 aa4□□□□□ -1.77
CPNE3-213ENST00000622183 TMCC3Q9ULS5 477 aa4□□□□□ -1.77
CPNE3-213ENST00000622183 MFHAS1Q9Y4C4 1052 aa4□□□□□ -1.77
CPNE3-213ENST00000622183 RNF115Q9Y4L5 304 aa4□□□□□ -1.77
CPNE3-213ENST00000622183 A0A0J9YVX5 310 aa3.99□□□□□ -1.77
CPNE3-213ENST00000622183 H3BMH7 237 aa3.99□□□□□ -1.77
CPNE3-213ENST00000622183 ALOX15BO15296 676 aa3.99□□□□□ -1.77
CPNE3-213ENST00000622183 RANBP6O60518 1105 aaKnown RBP3.99□□□□□ -1.77
CPNE3-213ENST00000622183 KRT8P05787 483 aa3.99□□□□□ -1.77
CPNE3-213ENST00000622183 LMO2P25791 158 aa3.99□□□□□ -1.77
CPNE3-213ENST00000622183 OXTRP30559 389 aa3.99□□□□□ -1.77
CPNE3-213ENST00000622183 SPRP35270 261 aaPredicted RBP3.99□□□□□ -1.77
CPNE3-213ENST00000622183 SAA4P35542 130 aa3.99□□□□□ -1.77
CPNE3-213ENST00000622183 PRELPP51888 382 aa3.99□□□□□ -1.77
CPNE3-213ENST00000622183 VCPP55072 806 aaKnown RBP3.99□□□□□ -1.77
CPNE3-213ENST00000622183 NOP14P78316 857 aaKnown RBP3.99□□□□□ -1.77
CPNE3-213ENST00000622183 GSTO1P78417 241 aa3.99□□□□□ -1.77
CPNE3-213ENST00000622183 EXOSC2Q13868 293 aaKnown RBP3.99□□□□□ -1.77
CPNE3-213ENST00000622183 CD226Q15762 336 aa3.99□□□□□ -1.77
CPNE3-213ENST00000622183 CCL14Q16627 93 aa3.99□□□□□ -1.77
CPNE3-213ENST00000622183 MRGPRG-AS1Q2M3A8 158 aa3.99□□□□□ -1.77
CPNE3-213ENST00000622183 CEP85LQ5SZL2 805 aa3.99□□□□□ -1.77
CPNE3-213ENST00000622183 LINC00242Q5T6M2 205 aa3.99□□□□□ -1.77
CPNE3-213ENST00000622183 TAF3Q5VWG9 929 aa3.99□□□□□ -1.77
CPNE3-213ENST00000622183 SLC39A4Q6P5W5 647 aa3.99□□□□□ -1.77
CPNE3-213ENST00000622183 LRRC8BQ6P9F7 803 aa3.99□□□□□ -1.77
CPNE3-213ENST00000622183 ZNF562Q6V9R5 426 aa3.99□□□□□ -1.77
CPNE3-213ENST00000622183 STOX1Q6ZVD7 989 aa3.99□□□□□ -1.77
CPNE3-213ENST00000622183 ERASQ7Z444 233 aa3.99□□□□□ -1.77
CPNE3-213ENST00000622183 NET1Q7Z628 596 aaPredicted RBP3.99□□□□□ -1.77
CPNE3-213ENST00000622183 CBWD2Q8IUF1 395 aa3.99□□□□□ -1.77
CPNE3-213ENST00000622183 CCDC36Q8IYA8 594 aa3.99□□□□□ -1.77
CPNE3-213ENST00000622183 CENPSQ8N2Z9 138 aa3.99□□□□□ -1.77
CPNE3-213ENST00000622183 FADS6Q8N9I5 356 aa3.99□□□□□ -1.77
CPNE3-213ENST00000622183 BEST4Q8NFU0 473 aa3.99□□□□□ -1.77
CPNE3-213ENST00000622183 OR4F17Q8NGA8 305 aa3.99□□□□□ -1.77
CPNE3-213ENST00000622183 DTNBP1Q96EV8 351 aa3.99□□□□□ -1.77
CPNE3-213ENST00000622183 ZNF597Q96LX8 424 aa3.99□□□□□ -1.77
CPNE3-213ENST00000622183 OR4F4Q96R69 305 aa3.99□□□□□ -1.77
CPNE3-213ENST00000622183 CCDC28BQ9BUN5 200 aa3.99□□□□□ -1.77
CPNE3-213ENST00000622183 LRRC61Q9BV99 259 aa3.99□□□□□ -1.77
CPNE3-213ENST00000622183 CARD6Q9BX69 1037 aa3.99□□□□□ -1.77
CPNE3-213ENST00000622183 TSPY26PQ9H489 355 aa3.99□□□□□ -1.77
CPNE3-213ENST00000622183 RPAP3Q9H6T3 665 aaPredicted RBP3.99□□□□□ -1.77
CPNE3-213ENST00000622183 COG4Q9H9E3 785 aa3.99□□□□□ -1.77
CPNE3-213ENST00000622183 TRPV5Q9NQA5 729 aa3.99□□□□□ -1.77
CPNE3-213ENST00000622183 FAM114A2Q9NRY5 505 aa3.99□□□□□ -1.77
CPNE3-213ENST00000622183 CGNQ9P2M7 1197 aaKnown RBP3.99□□□□□ -1.77
CPNE3-213ENST00000622183 LAMP5Q9UJQ1 280 aa3.99□□□□□ -1.77
CPNE3-213ENST00000622183 ZNF346Q9UL40 294 aaKnown RBP3.99□□□□□ -1.77
CPNE3-213ENST00000622183 CHMP2BQ9UQN3 213 aa3.99□□□□□ -1.77
CPNE3-213ENST00000622183 CPQQ9Y646 472 aa3.99□□□□□ -1.77
CPNE3-213ENST00000622183 PARD3Q8TEW0 1356 aa3.99□□□□□ -1.77
CPNE3-213ENST00000622183 TEX48A0A1B0GUV7 120 aa3.98□□□□□ -1.77
CPNE3-213ENST00000622183 TTC26A0AVF1 554 aa3.98□□□□□ -1.77
CPNE3-213ENST00000622183 NPIPA2E9PIF3 369 aa3.98□□□□□ -1.77
CPNE3-213ENST00000622183 H0YL77 283 aa3.98□□□□□ -1.77
CPNE3-213ENST00000622183 IMPA2O14732 288 aa3.98□□□□□ -1.77
CPNE3-213ENST00000622183 PDE5AO76074 875 aa3.98□□□□□ -1.77
CPNE3-213ENST00000622183 OR4F21O95013 312 aa3.98□□□□□ -1.77
CPNE3-213ENST00000622183 IGSF6O95976 241 aa3.98□□□□□ -1.77
CPNE3-213ENST00000622183 GOT2P00505 430 aaKnown RBP3.98□□□□□ -1.77
CPNE3-213ENST00000622183 ANXA4P09525 319 aaPredicted RBP3.98□□□□□ -1.77
CPNE3-213ENST00000622183 TSPY4P0CV99 314 aa3.98□□□□□ -1.77
CPNE3-213ENST00000622183 TSPY10P0CW01 314 aa3.98□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms