RNA–Protein interactions for RNA: ENST00000622020.4

NPHP4-211, Transcript of nephrocystin 4, humanhuman

TSL 5 BASIC

Gene NPHP4, Length 3,004 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-211ENST00000622020 SAP130Q9H0E3 1048 aa14.88□□□□□ -0.03
NPHP4-211ENST00000622020 HDHD2Q9H0R4 259 aa14.88□□□□□ -0.03
NPHP4-211ENST00000622020 AP1M2Q9Y6Q5 423 aa14.88□□□□□ -0.03
NPHP4-211ENST00000622020 ZNF106Q9H2Y7 1883 aaKnown RBP14.88□□□□□ -0.03
NPHP4-211ENST00000622020 C12orf71A8MTZ7 269 aa14.87□□□□□ -0.03
NPHP4-211ENST00000622020 MMP20O60882 483 aa14.87□□□□□ -0.03
NPHP4-211ENST00000622020 MTNR1AP48039 350 aa14.87□□□□□ -0.03
NPHP4-211ENST00000622020 SREBF2Q12772 1141 aa14.87□□□□□ -0.03
NPHP4-211ENST00000622020 ELOAQ14241 798 aaKnown RBP14.87□□□□□ -0.03
NPHP4-211ENST00000622020 PLK5Q496M5 336 aa14.87□□□□□ -0.03
NPHP4-211ENST00000622020 PARS2Q7L3T8 475 aaKnown RBP14.87□□□□□ -0.03
NPHP4-211ENST00000622020 OR5H6Q8NGV6 325 aa14.87□□□□□ -0.03
NPHP4-211ENST00000622020 SUN5Q8TC36 379 aa14.87□□□□□ -0.03
NPHP4-211ENST00000622020 PHF21AQ96BD5 680 aa14.87□□□□□ -0.03
NPHP4-211ENST00000622020 SENP5Q96HI0 755 aaPredicted RBP14.87□□□□□ -0.03
NPHP4-211ENST00000622020 SIRT3Q9NTG7 399 aaPredicted RBP14.87□□□□□ -0.03
NPHP4-211ENST00000622020 KCNE3Q9Y6H6 103 aa14.87□□□□□ -0.03
NPHP4-211ENST00000622020 ZSCAN5BA6NJL1 495 aa14.87□□□□□ -0.03
NPHP4-211ENST00000622020 SCAMP1O15126 338 aa14.87□□□□□ -0.03
NPHP4-211ENST00000622020 ICMTO60725 284 aa14.87□□□□□ -0.03
NPHP4-211ENST00000622020 SLC2A10O95528 541 aa14.87□□□□□ -0.03
NPHP4-211ENST00000622020 C8AP07357 584 aa14.87□□□□□ -0.03
NPHP4-211ENST00000622020 SYN1P17600 705 aa14.87□□□□□ -0.03
NPHP4-211ENST00000622020 IRS1P35568 1242 aa14.87□□□□□ -0.03
NPHP4-211ENST00000622020 TCEA2Q15560 299 aa14.87□□□□□ -0.03
NPHP4-211ENST00000622020 TMEM201Q5SNT2 666 aa14.87□□□□□ -0.03
NPHP4-211ENST00000622020 TMC8Q8IU68 726 aa14.87□□□□□ -0.03
NPHP4-211ENST00000622020 ZNF547Q8IVP9 402 aa14.87□□□□□ -0.03
NPHP4-211ENST00000622020 BBS1Q8NFJ9 593 aa14.87□□□□□ -0.03
NPHP4-211ENST00000622020 OR8D4Q8NGM9 314 aa14.87□□□□□ -0.03
NPHP4-211ENST00000622020 NEIL3Q8TAT5 605 aa14.87□□□□□ -0.03
NPHP4-211ENST00000622020 ZNF558Q96NG5 402 aa14.87□□□□□ -0.03
NPHP4-211ENST00000622020 C17orf62Q9BQA9 187 aa14.87□□□□□ -0.03
NPHP4-211ENST00000622020 SGPP1Q9BX95 441 aa14.87□□□□□ -0.03
NPHP4-211ENST00000622020 SLA2Q9H6Q3 261 aa14.87□□□□□ -0.03
NPHP4-211ENST00000622020 TDP1Q9NUW8 608 aa14.87□□□□□ -0.03
NPHP4-211ENST00000622020 ACOXLQ9NUZ1 547 aa14.87□□□□□ -0.03
NPHP4-211ENST00000622020 TESQ9UGI8 421 aaKnown RBP14.87□□□□□ -0.03
NPHP4-211ENST00000622020 IL36AQ9UHA7 158 aa14.87□□□□□ -0.03
NPHP4-211ENST00000622020 GSTK1Q9Y2Q3 226 aa14.87□□□□□ -0.03
NPHP4-211ENST00000622020 ANTXRLA6NF34 631 aa14.87□□□□□ -0.03
NPHP4-211ENST00000622020 LYRM1O43325 122 aa14.87□□□□□ -0.03
NPHP4-211ENST00000622020 ZNF780AO75290 641 aaPredicted RBP14.87□□□□□ -0.03
NPHP4-211ENST00000622020 NNMTP40261 264 aa14.87□□□□□ -0.03
NPHP4-211ENST00000622020 MESP2Q0VG99 397 aa14.87□□□□□ -0.03
NPHP4-211ENST00000622020 PRICKLE2Q7Z3G6 844 aa14.87□□□□□ -0.03
NPHP4-211ENST00000622020 SLC38A6Q8IZM9 456 aa14.87□□□□□ -0.03
NPHP4-211ENST00000622020 FAM26EQ8N5C1 309 aa14.87□□□□□ -0.03
NPHP4-211ENST00000622020 CLDN22Q8N7P3 220 aa14.87□□□□□ -0.03
NPHP4-211ENST00000622020 DNAJC5GQ8N7S2 189 aa14.87□□□□□ -0.03
NPHP4-211ENST00000622020 ANKK1Q8NFD2 765 aa14.87□□□□□ -0.03
NPHP4-211ENST00000622020 C16orf58Q96GQ5 468 aa14.87□□□□□ -0.03
NPHP4-211ENST00000622020 MAN2C1Q9NTJ4 1040 aa14.87□□□□□ -0.03
NPHP4-211ENST00000622020 CSNK1G3Q9Y6M4 447 aa14.87□□□□□ -0.03
NPHP4-211ENST00000622020 ZC3H12DA2A288 527 aaKnown RBP14.86□□□□□ -0.03
NPHP4-211ENST00000622020 LATO43561 262 aa14.86□□□□□ -0.03
NPHP4-211ENST00000622020 OR1F1O43749 312 aa14.86□□□□□ -0.03
NPHP4-211ENST00000622020 OR2B3O76000 313 aa14.86□□□□□ -0.03
NPHP4-211ENST00000622020 CRYZL1O95825 349 aa14.86□□□□□ -0.03
NPHP4-211ENST00000622020 EPPINO95925 133 aa14.86□□□□□ -0.03
NPHP4-211ENST00000622020 EFEMP2O95967 443 aa14.86□□□□□ -0.03
NPHP4-211ENST00000622020 INHAP05111 366 aa14.86□□□□□ -0.03
NPHP4-211ENST00000622020 ALPPP05187 535 aa14.86□□□□□ -0.03
NPHP4-211ENST00000622020 SRPRAP08240 638 aaKnown RBP14.86□□□□□ -0.03
NPHP4-211ENST00000622020 LIMS3P0CW19 117 aa14.86□□□□□ -0.03
NPHP4-211ENST00000622020 LIMS4P0CW20 117 aa14.86□□□□□ -0.03
NPHP4-211ENST00000622020 SP3Q02447 781 aa14.86□□□□□ -0.03
NPHP4-211ENST00000622020 OCLNQ16625 522 aa14.86□□□□□ -0.03
NPHP4-211ENST00000622020 ZNF628Q5EBL2 1059 aa14.86□□□□□ -0.03
NPHP4-211ENST00000622020 KHDRBS2Q5VWX1 349 aaKnown RBP14.86□□□□□ -0.03
NPHP4-211ENST00000622020 OR5P2Q8WZ92 322 aa14.86□□□□□ -0.03
NPHP4-211ENST00000622020 ZNF689Q96CS4 500 aaPredicted RBP14.86□□□□□ -0.03
NPHP4-211ENST00000622020 ARPC5LQ9BPX5 153 aa14.86□□□□□ -0.03
NPHP4-211ENST00000622020 POLDIP3Q9BY77 421 aaKnown RBP14.86□□□□□ -0.03
NPHP4-211ENST00000622020 LOC105378220A0A1B0GUY1 285 aaPredicted RBP14.86□□□□□ -0.03
NPHP4-211ENST00000622020 ARRDC5A6NEK1 342 aa14.86□□□□□ -0.03
NPHP4-211ENST00000622020 RB1P06400 928 aa14.86□□□□□ -0.03
NPHP4-211ENST00000622020 SLC7A9P82251 487 aa14.86□□□□□ -0.03
NPHP4-211ENST00000622020 CHRNEQ04844 493 aa14.86□□□□□ -0.03
NPHP4-211ENST00000622020 IDNKQ5T6J7 187 aa14.86□□□□□ -0.03
NPHP4-211ENST00000622020 RRM2BQ7LG56 351 aa14.86□□□□□ -0.03
NPHP4-211ENST00000622020 KLBQ86Z14 1044 aa14.86□□□□□ -0.03
NPHP4-211ENST00000622020 TEX47Q8TBZ9 253 aa14.86□□□□□ -0.03
NPHP4-211ENST00000622020 DOK4Q8TEW6 326 aa14.86□□□□□ -0.03
NPHP4-211ENST00000622020 IRF7Q92985 503 aa14.86□□□□□ -0.03
NPHP4-211ENST00000622020 ZNF717Q9BY31 904 aaPredicted RBP14.86□□□□□ -0.03
NPHP4-211ENST00000622020 SF3B6Q9Y3B4 125 aaKnown RBP14.86□□□□□ -0.03
NPHP4-211ENST00000622020 TRAV6A0A075B6T7 132 aa14.85□□□□□ -0.03
NPHP4-211ENST00000622020 A0A087WUU8 490 aa14.85□□□□□ -0.03
NPHP4-211ENST00000622020 ARHGEF9O43307 516 aa14.85□□□□□ -0.03
NPHP4-211ENST00000622020 LZTS3O60299 673 aaPredicted RBP14.85□□□□□ -0.03
NPHP4-211ENST00000622020 ALDH1A1P00352 501 aa14.85□□□□□ -0.03
NPHP4-211ENST00000622020 GPR4P46093 362 aa14.85□□□□□ -0.03
NPHP4-211ENST00000622020 TAS2R41P59536 307 aa14.85□□□□□ -0.03
NPHP4-211ENST00000622020 ZNF805Q5CZA5 627 aa14.85□□□□□ -0.03
NPHP4-211ENST00000622020 PIP5KL1Q5T9C9 394 aa14.85□□□□□ -0.03
NPHP4-211ENST00000622020 SIGIRRQ6IA17 410 aa14.85□□□□□ -0.03
NPHP4-211ENST00000622020 HSDL2Q6YN16 418 aa14.85□□□□□ -0.03
NPHP4-211ENST00000622020 CCDC116Q8IYX3 515 aa14.85□□□□□ -0.03
NPHP4-211ENST00000622020 ELMOD2Q8IZ81 293 aa14.85□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms