RNA–Protein interactions for RNA: ENST00000621967.4

FAM3A-222, Transcript of family with sequence similarity 3 member A, humanhuman

TSL 2

Gene FAM3A, Length 1,901 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3A-222ENST00000621967 TLR4O00206 839 aa16.45■□□□□ 0.22
FAM3A-222ENST00000621967 HMGN4O00479 90 aa16.45■□□□□ 0.22
FAM3A-222ENST00000621967 DLL1O00548 723 aa16.45■□□□□ 0.22
FAM3A-222ENST00000621967 AQP9O43315 295 aa16.45■□□□□ 0.22
FAM3A-222ENST00000621967 WNT1P04628 370 aa16.45■□□□□ 0.22
FAM3A-222ENST00000621967 RPN2P04844 631 aa16.45■□□□□ 0.22
FAM3A-222ENST00000621967 CEACAM5P06731 702 aa16.45■□□□□ 0.22
FAM3A-222ENST00000621967 KCNJ5P48544 419 aa16.45■□□□□ 0.22
FAM3A-222ENST00000621967 CD300CQ08708 224 aa16.45■□□□□ 0.22
FAM3A-222ENST00000621967 SEC23BQ15437 767 aa16.45■□□□□ 0.22
FAM3A-222ENST00000621967 SOWAHCQ53LP3 525 aaPredicted RBP16.45■□□□□ 0.22
FAM3A-222ENST00000621967 SLX4IPQ5VYV7 408 aa16.45■□□□□ 0.22
FAM3A-222ENST00000621967 METRNLQ641Q3 311 aa16.45■□□□□ 0.22
FAM3A-222ENST00000621967 C6orf120Q7Z4R8 191 aa16.45■□□□□ 0.22
FAM3A-222ENST00000621967 LRRTM4Q86VH4 590 aa16.45■□□□□ 0.22
FAM3A-222ENST00000621967 SMPDL3AQ92484 453 aa16.45■□□□□ 0.22
FAM3A-222ENST00000621967 MGLLQ99685 303 aa16.45■□□□□ 0.22
FAM3A-222ENST00000621967 NRTNQ99748 197 aa16.45■□□□□ 0.22
FAM3A-222ENST00000621967 FUZQ9BT04 418 aa16.45■□□□□ 0.22
FAM3A-222ENST00000621967 UCK2Q9BZX2 261 aa16.45■□□□□ 0.22
FAM3A-222ENST00000621967 RMI1Q9H9A7 625 aa16.45■□□□□ 0.22
FAM3A-222ENST00000621967 ADAM29Q9UKF5 820 aa16.45■□□□□ 0.22
FAM3A-222ENST00000621967 PILRBQ9UKJ0 227 aa16.45■□□□□ 0.22
FAM3A-222ENST00000621967 TNRC6BQ9UPQ9 1833 aaKnown RBP16.45■□□□□ 0.22
FAM3A-222ENST00000621967 CACNA1HO95180 2353 aa16.44■□□□□ 0.22
FAM3A-222ENST00000621967 SPTY2D1-AS1A0A0U1RR47 76 aa16.44■□□□□ 0.22
FAM3A-222ENST00000621967 PRSS38A1L453 326 aa16.44■□□□□ 0.22
FAM3A-222ENST00000621967 FAAHO00519 579 aa16.44■□□□□ 0.22
FAM3A-222ENST00000621967 ETV6P41212 452 aa16.44■□□□□ 0.22
FAM3A-222ENST00000621967 CSNK1EP49674 416 aaKnown RBP16.44■□□□□ 0.22
FAM3A-222ENST00000621967 CCR8P51685 355 aa16.44■□□□□ 0.22
FAM3A-222ENST00000621967 MLC1Q15049 377 aa16.44■□□□□ 0.22
FAM3A-222ENST00000621967 TIMM50Q3ZCQ8 353 aa16.44■□□□□ 0.22
FAM3A-222ENST00000621967 C12orf73Q69YU5 71 aa16.44■□□□□ 0.22
FAM3A-222ENST00000621967 RD3Q7Z3Z2 195 aa16.44■□□□□ 0.22
FAM3A-222ENST00000621967 TRIM73Q86UV7 250 aa16.44■□□□□ 0.22
FAM3A-222ENST00000621967 PARGQ86W56 976 aa16.44■□□□□ 0.22
FAM3A-222ENST00000621967 NUDT13Q86X67 352 aa16.44■□□□□ 0.22
FAM3A-222ENST00000621967 RASSF5Q8WWW0 418 aa16.44■□□□□ 0.22
FAM3A-222ENST00000621967 ZBED6CLQ96FA7 236 aaPredicted RBP16.44■□□□□ 0.22
FAM3A-222ENST00000621967 ZNF354BQ96LW1 612 aa16.44■□□□□ 0.22
FAM3A-222ENST00000621967 CHCHD6Q9BRQ6 235 aa16.44■□□□□ 0.22
FAM3A-222ENST00000621967 SERHL2Q9H4I8 314 aa16.44■□□□□ 0.22
FAM3A-222ENST00000621967 POLE4Q9NR33 117 aa16.44■□□□□ 0.22
FAM3A-222ENST00000621967 GPR27Q9NS67 375 aa16.44■□□□□ 0.22
FAM3A-222ENST00000621967 ACSS1Q9NUB1 689 aaPredicted RBP16.44■□□□□ 0.22
FAM3A-222ENST00000621967 TMEM74BQ9NUR3 256 aa16.44■□□□□ 0.22
FAM3A-222ENST00000621967 PAIP2BQ9ULR5 123 aaKnown RBP16.44■□□□□ 0.22
FAM3A-222ENST00000621967 TMCC3Q9ULS5 477 aa16.44■□□□□ 0.22
FAM3A-222ENST00000621967 FANCMQ8IYD8 2048 aa16.44■□□□□ 0.22
FAM3A-222ENST00000621967 CCRL2O00421 344 aa16.43■□□□□ 0.22
FAM3A-222ENST00000621967 TNFRSF10CO14798 259 aa16.43■□□□□ 0.22
FAM3A-222ENST00000621967 TMPRSS11DO60235 418 aa16.43■□□□□ 0.22
FAM3A-222ENST00000621967 HSPB3Q12988 150 aa16.43■□□□□ 0.22
FAM3A-222ENST00000621967 DOC2BQ14184 412 aa16.43■□□□□ 0.22
FAM3A-222ENST00000621967 RAB8BQ92930 207 aa16.43■□□□□ 0.22
FAM3A-222ENST00000621967 ABCB10Q9NRK6 738 aa16.43■□□□□ 0.22
FAM3A-222ENST00000621967 TAS2R7Q9NYW3 318 aa16.43■□□□□ 0.22
FAM3A-222ENST00000621967 LSM2Q9Y333 95 aaKnown RBP16.43■□□□□ 0.22
FAM3A-222ENST00000621967 DNMT3AQ9Y6K1 912 aaPredicted RBP16.43■□□□□ 0.22
FAM3A-222ENST00000621967 FEZF1A0PJY2 475 aa16.43■□□□□ 0.22
FAM3A-222ENST00000621967 NDUFS4O43181 175 aa16.43■□□□□ 0.22
FAM3A-222ENST00000621967 HSMCR30P0CW71 290 aa16.43■□□□□ 0.22
FAM3A-222ENST00000621967 PSMB5P28074 263 aa16.43■□□□□ 0.22
FAM3A-222ENST00000621967 HOXD12P35452 270 aa16.43■□□□□ 0.22
FAM3A-222ENST00000621967 SRP54P61011 504 aaKnown RBP16.43■□□□□ 0.22
FAM3A-222ENST00000621967 RHAGQ02094 409 aa16.43■□□□□ 0.22
FAM3A-222ENST00000621967 SSX1Q16384 188 aa16.43■□□□□ 0.22
FAM3A-222ENST00000621967 TSTQ16762 297 aaKnown RBP16.43■□□□□ 0.22
FAM3A-222ENST00000621967 DCST1Q5T197 706 aa16.43■□□□□ 0.22
FAM3A-222ENST00000621967 STEAP3Q658P3 488 aa16.43■□□□□ 0.22
FAM3A-222ENST00000621967 UBE3DQ7Z6J8 389 aa16.43■□□□□ 0.22
FAM3A-222ENST00000621967 RABEPKQ7Z6M1 372 aa16.43■□□□□ 0.22
FAM3A-222ENST00000621967 PRSS33Q8NF86 280 aa16.43■□□□□ 0.22
FAM3A-222ENST00000621967 OR4D11Q8NGI4 311 aa16.43■□□□□ 0.22
FAM3A-222ENST00000621967 OR1E3Q8WZA6 343 aa16.43■□□□□ 0.22
FAM3A-222ENST00000621967 TSACCQ96A04 125 aaPredicted RBP16.43■□□□□ 0.22
FAM3A-222ENST00000621967 RGMAQ96B86 450 aa16.43■□□□□ 0.22
FAM3A-222ENST00000621967 Q96MT0 163 aa16.43■□□□□ 0.22
FAM3A-222ENST00000621967 ZNF607Q96SK3 696 aa16.43■□□□□ 0.22
FAM3A-222ENST00000621967 TEX10Q9NXF1 929 aaPredicted RBP16.43■□□□□ 0.22
FAM3A-222ENST00000621967 C5AR2Q9P296 337 aa16.43■□□□□ 0.22
FAM3A-222ENST00000621967 PEX16Q9Y5Y5 336 aa16.43■□□□□ 0.22
FAM3A-222ENST00000621967 H7BY64 318 aa16.42■□□□□ 0.22
FAM3A-222ENST00000621967 ARHGAP33O14559 1287 aa16.42■□□□□ 0.22
FAM3A-222ENST00000621967 ENTPD6O75354 484 aa16.42■□□□□ 0.22
FAM3A-222ENST00000621967 SLITRK5O94991 958 aa16.42■□□□□ 0.22
FAM3A-222ENST00000621967 H1F0P07305 194 aaKnown RBP16.42■□□□□ 0.22
FAM3A-222ENST00000621967 POU1F1P28069 291 aa16.42■□□□□ 0.22
FAM3A-222ENST00000621967 S100A5P33763 92 aa16.42■□□□□ 0.22
FAM3A-222ENST00000621967 NXPH1P58417 271 aa16.42■□□□□ 0.22
FAM3A-222ENST00000621967 TRA2BP62995 288 aaKnown RBP16.42■□□□□ 0.22
FAM3A-222ENST00000621967 KHDRBS1Q07666 443 aaKnown RBP eCLIP16.42■□□□□ 0.22
FAM3A-222ENST00000621967 TCF15Q12870 199 aa16.42■□□□□ 0.22
FAM3A-222ENST00000621967 FZD2Q14332 565 aa16.42■□□□□ 0.22
FAM3A-222ENST00000621967 MED22Q15528 200 aa16.42■□□□□ 0.22
FAM3A-222ENST00000621967 ALG11Q2TAA5 492 aa16.42■□□□□ 0.22
FAM3A-222ENST00000621967 MEDAGQ5VYS4 303 aa16.42■□□□□ 0.22
FAM3A-222ENST00000621967 CYP4Z2PQ8N1L4 340 aa16.42■□□□□ 0.22
FAM3A-222ENST00000621967 PARP16Q8N5Y8 322 aa16.42■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms