RNA–Protein interactions for RNA: ENST00000621181.4

CLK1-215, Transcript of CDC like kinase 1, humanhuman

TSL 1 (best) BASIC

Gene CLK1, Length 1,843 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-215ENST00000621181 KIAA1191Q96A73 305 aa7.2□□□□□ -1.26
CLK1-215ENST00000621181 CERS2Q96G23 380 aa7.2□□□□□ -1.26
CLK1-215ENST00000621181 YIPF4Q9BSR8 244 aa7.2□□□□□ -1.26
CLK1-215ENST00000621181 NAT9Q9BTE0 207 aa7.2□□□□□ -1.26
CLK1-215ENST00000621181 SLC6A15Q9H2J7 730 aa7.2□□□□□ -1.26
CLK1-215ENST00000621181 ZFP64Q9NPA5 681 aa7.2□□□□□ -1.26
CLK1-215ENST00000621181 ZNF629Q9UEG4 869 aaPredicted RBP7.2□□□□□ -1.26
CLK1-215ENST00000621181 IKZF3Q9UKT9 509 aa7.2□□□□□ -1.26
CLK1-215ENST00000621181 NCKAP5O14513 1909 aa7.19□□□□□ -1.26
CLK1-215ENST00000621181 TLN2Q9Y4G6 2542 aa7.19□□□□□ -1.26
CLK1-215ENST00000621181 NPEPPSL1A6NEC2 478 aa7.19□□□□□ -1.26
CLK1-215ENST00000621181 FAM171A2A8MVW0 826 aa7.19□□□□□ -1.26
CLK1-215ENST00000621181 AHRRA9YTQ3 701 aa7.19□□□□□ -1.26
CLK1-215ENST00000621181 EEF1E1-BLOC1S5C9J1V9 151 aa7.19□□□□□ -1.26
CLK1-215ENST00000621181 CDC7O00311 574 aa7.19□□□□□ -1.26
CLK1-215ENST00000621181 EEF1E1O43324 174 aaKnown RBP7.19□□□□□ -1.26
CLK1-215ENST00000621181 DYRK3O43781 588 aa7.19□□□□□ -1.26
CLK1-215ENST00000621181 LYPLA1O75608 230 aaPredicted RBP7.19□□□□□ -1.26
CLK1-215ENST00000621181 ENO1P06733 434 aaKnown RBP7.19□□□□□ -1.26
CLK1-215ENST00000621181 NEFHP12036 1026 aa7.19□□□□□ -1.26
CLK1-215ENST00000621181 GDF1P27539 372 aa7.19□□□□□ -1.26
CLK1-215ENST00000621181 TIMP3P35625 211 aa7.19□□□□□ -1.26
CLK1-215ENST00000621181 CPA2P48052 419 aa7.19□□□□□ -1.26
CLK1-215ENST00000621181 KCNC1P48547 511 aa7.19□□□□□ -1.26
CLK1-215ENST00000621181 WNT3P56703 355 aa7.19□□□□□ -1.26
CLK1-215ENST00000621181 DCAF7P61962 342 aa7.19□□□□□ -1.26
CLK1-215ENST00000621181 ID2Q02363 134 aa7.19□□□□□ -1.26
CLK1-215ENST00000621181 ZNF791Q3KP31 576 aaPredicted RBP7.19□□□□□ -1.26
CLK1-215ENST00000621181 FBXL19-AS1Q494R0 122 aa7.19□□□□□ -1.26
CLK1-215ENST00000621181 ACSF3Q4G176 576 aaPredicted RBP7.19□□□□□ -1.26
CLK1-215ENST00000621181 PIGGQ5H8A4 983 aa7.19□□□□□ -1.26
CLK1-215ENST00000621181 SPANXN3Q5MJ09 141 aa7.19□□□□□ -1.26
CLK1-215ENST00000621181 TMEM198Q66K66 360 aa7.19□□□□□ -1.26
CLK1-215ENST00000621181 ABHD17CQ6PCB6 329 aa7.19□□□□□ -1.26
CLK1-215ENST00000621181 SLCO4C1Q6ZQN7 724 aa7.19□□□□□ -1.26
CLK1-215ENST00000621181 LRRC74BQ6ZQY2 392 aa7.19□□□□□ -1.26
CLK1-215ENST00000621181 CHSY3Q70JA7 882 aa7.19□□□□□ -1.26
CLK1-215ENST00000621181 GALNT7Q86SF2 657 aa7.19□□□□□ -1.26
CLK1-215ENST00000621181 LACC1Q8IV20 430 aa7.19□□□□□ -1.26
CLK1-215ENST00000621181 NUBPLQ8TB37 319 aa7.19□□□□□ -1.26
CLK1-215ENST00000621181 PAQR8Q8TEZ7 354 aa7.19□□□□□ -1.26
CLK1-215ENST00000621181 ZNF721Q8TF20 911 aa7.19□□□□□ -1.26
CLK1-215ENST00000621181 SPACA9Q96E40 222 aaPredicted RBP7.19□□□□□ -1.26
CLK1-215ENST00000621181 HSPBAP1Q96EW2 488 aa7.19□□□□□ -1.26
CLK1-215ENST00000621181 PDLIM5Q96HC4 596 aaKnown RBP7.19□□□□□ -1.26
CLK1-215ENST00000621181 QRFPRQ96P65 431 aa7.19□□□□□ -1.26
CLK1-215ENST00000621181 KCNC2Q96PR1 638 aa7.19□□□□□ -1.26
CLK1-215ENST00000621181 DOHHQ9BU89 302 aa7.19□□□□□ -1.26
CLK1-215ENST00000621181 ACKR4Q9NPB9 350 aa7.19□□□□□ -1.26
CLK1-215ENST00000621181 QPCTLQ9NXS2 382 aa7.19□□□□□ -1.26
CLK1-215ENST00000621181 TMEM216Q9P0N5 145 aa7.19□□□□□ -1.26
CLK1-215ENST00000621181 MARCOQ9UEW3 520 aaPredicted RBP7.19□□□□□ -1.26
CLK1-215ENST00000621181 DCDC2Q9UHG0 476 aa7.19□□□□□ -1.26
CLK1-215ENST00000621181 SLC7A8Q9UHI5 535 aa7.19□□□□□ -1.26
CLK1-215ENST00000621181 SPACA6W5XKT8 324 aa7.19□□□□□ -1.26
CLK1-215ENST00000621181 RTTNQ86VV8 2226 aa7.19□□□□□ -1.26
CLK1-215ENST00000621181 DPPA5A6NC42 116 aa7.18□□□□□ -1.26
CLK1-215ENST00000621181 NCF1BA6NI72 391 aaPredicted RBP7.18□□□□□ -1.26
CLK1-215ENST00000621181 CLCA1A8K7I4 914 aa7.18□□□□□ -1.26
CLK1-215ENST00000621181 NCF1CA8MVU1 366 aaPredicted RBP7.18□□□□□ -1.26
CLK1-215ENST00000621181 CLGNO14967 610 aa7.18□□□□□ -1.26
CLK1-215ENST00000621181 CCNT2O60583 730 aaKnown RBP7.18□□□□□ -1.26
CLK1-215ENST00000621181 ETHE1O95571 254 aa7.18□□□□□ -1.26
CLK1-215ENST00000621181 EPPINO95925 133 aa7.18□□□□□ -1.26
CLK1-215ENST00000621181 HEXAP06865 529 aa7.18□□□□□ -1.26
CLK1-215ENST00000621181 NCF1P14598 390 aaPredicted RBP7.18□□□□□ -1.26
CLK1-215ENST00000621181 GRK2P25098 689 aa7.18□□□□□ -1.26
CLK1-215ENST00000621181 GP5P40197 560 aa7.18□□□□□ -1.26
CLK1-215ENST00000621181 SLC1A6P48664 564 aa7.18□□□□□ -1.26
CLK1-215ENST00000621181 IDH3AP50213 366 aa7.18□□□□□ -1.26
CLK1-215ENST00000621181 NKX6-1P78426 367 aaPredicted RBP7.18□□□□□ -1.26
CLK1-215ENST00000621181 CDKL1Q00532 357 aa7.18□□□□□ -1.26
CLK1-215ENST00000621181 DUSP8Q13202 625 aa7.18□□□□□ -1.26
CLK1-215ENST00000621181 TRMT5Q32P41 509 aaKnown RBP7.18□□□□□ -1.26
CLK1-215ENST00000621181 ADPRMQ3LIE5 342 aa7.18□□□□□ -1.26
CLK1-215ENST00000621181 DNAL1Q4LDG9 190 aa7.18□□□□□ -1.26
CLK1-215ENST00000621181 OR52E8Q6IFG1 317 aa7.18□□□□□ -1.26
CLK1-215ENST00000621181 C10orf107Q8IVU9 208 aa7.18□□□□□ -1.26
CLK1-215ENST00000621181 C9orf40Q8IXQ3 194 aa7.18□□□□□ -1.26
CLK1-215ENST00000621181 PM20D2Q8IYS1 436 aa7.18□□□□□ -1.26
CLK1-215ENST00000621181 LRRC25Q8N386 305 aaPredicted RBP7.18□□□□□ -1.26
CLK1-215ENST00000621181 TMEM151AQ8N4L1 468 aa7.18□□□□□ -1.26
CLK1-215ENST00000621181 NKAPQ8N5F7 415 aaKnown RBP7.18□□□□□ -1.26
CLK1-215ENST00000621181 OR10G3Q8NGC4 313 aa7.18□□□□□ -1.26
CLK1-215ENST00000621181 LINC01560Q8TB33 94 aa7.18□□□□□ -1.26
CLK1-215ENST00000621181 PIWIL2Q8TC59 973 aaKnown RBP7.18□□□□□ -1.26
CLK1-215ENST00000621181 NUDT8Q8WV74 236 aa7.18□□□□□ -1.26
CLK1-215ENST00000621181 MCUR1Q96AQ8 359 aa7.18□□□□□ -1.26
CLK1-215ENST00000621181 RBM18Q96H35 190 aaKnown RBP7.18□□□□□ -1.26
CLK1-215ENST00000621181 SENP5Q96HI0 755 aaPredicted RBP7.18□□□□□ -1.26
CLK1-215ENST00000621181 CLPTM1LQ96KA5 538 aa7.18□□□□□ -1.26
CLK1-215ENST00000621181 DGAT2Q96PD7 388 aa7.18□□□□□ -1.26
CLK1-215ENST00000621181 GAL3ST4Q96RP7 486 aa7.18□□□□□ -1.26
CLK1-215ENST00000621181 CPNE1Q99829 537 aa7.18□□□□□ -1.26
CLK1-215ENST00000621181 PITHD1Q9GZP4 211 aaPredicted RBP7.18□□□□□ -1.26
CLK1-215ENST00000621181 PLEKHF2Q9H8W4 249 aa7.18□□□□□ -1.26
CLK1-215ENST00000621181 LYRM4Q9HD34 91 aa7.18□□□□□ -1.26
CLK1-215ENST00000621181 SH2D2AQ9NP31 389 aa7.18□□□□□ -1.26
CLK1-215ENST00000621181 PNPOQ9NVS9 261 aa7.18□□□□□ -1.26
CLK1-215ENST00000621181 SDAD1Q9NVU7 687 aaKnown RBP eCLIP7.18□□□□□ -1.265e-6■□□□□ 10.5
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms