RNA–Protein interactions for RNA: ENST00000620676.4

VPS13D-214, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene VPS13D, Length 16,320 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-214ENST00000620676 SNTB1Q13884 538 aaKnown RBP4.8□□□□□ -1.64
VPS13D-214ENST00000620676 MAPK14Q16539 360 aa4.8□□□□□ -1.64
VPS13D-214ENST00000620676 TMPRSS12Q86WS5 348 aa4.8□□□□□ -1.64
VPS13D-214ENST00000620676 NEK7Q8TDX7 302 aa4.8□□□□□ -1.64
VPS13D-214ENST00000620676 MAPKAP1Q9BPZ7 522 aa4.8□□□□□ -1.64
VPS13D-214ENST00000620676 UNC13BO14795 1591 aa4.8□□□□□ -1.64
VPS13D-214ENST00000620676 A0A087WZY1 265 aa4.8□□□□□ -1.64
VPS13D-214ENST00000620676 TEX13DA0A0J9YY54 714 aaPredicted RBP4.8□□□□□ -1.64
VPS13D-214ENST00000620676 H7C0S8 307 aa4.8□□□□□ -1.64
VPS13D-214ENST00000620676 FGF10O15520 208 aaPredicted RBP4.8□□□□□ -1.64
VPS13D-214ENST00000620676 B3GALT4O96024 378 aa4.8□□□□□ -1.64
VPS13D-214ENST00000620676 PCSK2P16519 638 aa4.8□□□□□ -1.64
VPS13D-214ENST00000620676 HTR1EP28566 365 aa4.8□□□□□ -1.64
VPS13D-214ENST00000620676 QSOX2Q6ZRP7 698 aa4.8□□□□□ -1.64
VPS13D-214ENST00000620676 RIPK3Q9Y572 518 aa4.8□□□□□ -1.64
VPS13D-214ENST00000620676 CDC42BPAQ5VT25 1732 aa4.8□□□□□ -1.64
VPS13D-214ENST00000620676 TRAV18A0A075B6X5 111 aa4.8□□□□□ -1.64
VPS13D-214ENST00000620676 GABRR3A8MPY1 467 aa4.8□□□□□ -1.64
VPS13D-214ENST00000620676 A8MVJ9 347 aa4.8□□□□□ -1.64
VPS13D-214ENST00000620676 D6RAR5 112 aa4.8□□□□□ -1.64
VPS13D-214ENST00000620676 H0Y8G0 127 aa4.8□□□□□ -1.64
VPS13D-214ENST00000620676 S1PR4O95977 384 aa4.8□□□□□ -1.64
VPS13D-214ENST00000620676 OR4Q2P0C623 313 aa4.8□□□□□ -1.64
VPS13D-214ENST00000620676 UBE2KP61086 200 aa4.8□□□□□ -1.64
VPS13D-214ENST00000620676 GHRHRQ02643 423 aa4.8□□□□□ -1.64
VPS13D-214ENST00000620676 OR7A5Q15622 319 aa4.8□□□□□ -1.64
VPS13D-214ENST00000620676 CTF1Q16619 201 aa4.8□□□□□ -1.64
VPS13D-214ENST00000620676 CTXN3Q4LDR2 81 aa4.8□□□□□ -1.64
VPS13D-214ENST00000620676 TMEM268Q5VZI3 342 aa4.8□□□□□ -1.64
VPS13D-214ENST00000620676 TMEM71Q6P5X7 295 aa4.8□□□□□ -1.64
VPS13D-214ENST00000620676 ZFAND4Q86XD8 727 aa4.8□□□□□ -1.64
VPS13D-214ENST00000620676 OR1J4Q8NGS1 313 aa4.8□□□□□ -1.64
VPS13D-214ENST00000620676 OR6F1Q8NGZ6 308 aa4.8□□□□□ -1.64
VPS13D-214ENST00000620676 SPRYD4Q8WW59 207 aaPredicted RBP4.8□□□□□ -1.64
VPS13D-214ENST00000620676 LINC00597Q9H2U6 94 aa4.8□□□□□ -1.64
VPS13D-214ENST00000620676 MIOXQ9UGB7 285 aa4.8□□□□□ -1.64
VPS13D-214ENST00000620676 MCIDASD6RGH6 385 aa4.8□□□□□ -1.64
VPS13D-214ENST00000620676 CHP2O43745 196 aa4.8□□□□□ -1.64
VPS13D-214ENST00000620676 HTR3BO95264 441 aa4.8□□□□□ -1.64
VPS13D-214ENST00000620676 THP07101 528 aa4.8□□□□□ -1.64
VPS13D-214ENST00000620676 ADH1AP07327 375 aa4.8□□□□□ -1.64
VPS13D-214ENST00000620676 OMGP23515 440 aa4.8□□□□□ -1.64
VPS13D-214ENST00000620676 PBX2P40425 430 aa4.8□□□□□ -1.64
VPS13D-214ENST00000620676 GCGRP47871 477 aa4.8□□□□□ -1.64
VPS13D-214ENST00000620676 EPHA4P54764 986 aa4.8□□□□□ -1.64
VPS13D-214ENST00000620676 HNF4GQ14541 408 aa4.8□□□□□ -1.64
VPS13D-214ENST00000620676 ACTBL2Q562R1 376 aa4.8□□□□□ -1.64
VPS13D-214ENST00000620676 C9orf57Q5W0N0 161 aa4.8□□□□□ -1.64
VPS13D-214ENST00000620676 ESPNLQ6ZVH7 1005 aa4.8□□□□□ -1.64
VPS13D-214ENST00000620676 SEMA6DQ8NFY4 1073 aa4.8□□□□□ -1.64
VPS13D-214ENST00000620676 SPNS1Q9H2V7 528 aa4.8□□□□□ -1.64
VPS13D-214ENST00000620676 CDH10Q9Y6N8 788 aa4.8□□□□□ -1.64
VPS13D-214ENST00000620676 CNTNAP4Q9C0A0 1308 aa4.8□□□□□ -1.64
VPS13D-214ENST00000620676 TCF21O43680 179 aa4.8□□□□□ -1.64
VPS13D-214ENST00000620676 TBL1XO60907 577 aa4.8□□□□□ -1.64
VPS13D-214ENST00000620676 GPR1P46091 355 aa4.8□□□□□ -1.64
VPS13D-214ENST00000620676 RPIAP49247 311 aa4.8□□□□□ -1.64
VPS13D-214ENST00000620676 CLEC12BQ2HXU8 276 aa4.8□□□□□ -1.64
VPS13D-214ENST00000620676 STEAP2Q8NFT2 490 aa4.8□□□□□ -1.64
VPS13D-214ENST00000620676 FRZBQ92765 325 aa4.8□□□□□ -1.64
VPS13D-214ENST00000620676 ZNF599Q96NL3 588 aa4.8□□□□□ -1.64
VPS13D-214ENST00000620676 FAM103A1Q9BTL3 118 aaKnown RBP4.8□□□□□ -1.64
VPS13D-214ENST00000620676 PBDC1Q9BVG4 233 aa4.8□□□□□ -1.64
VPS13D-214ENST00000620676 RBM38Q9H0Z9 239 aaKnown RBP4.8□□□□□ -1.64
VPS13D-214ENST00000620676 TCEAL2Q9H3H9 227 aaPredicted RBP4.8□□□□□ -1.64
VPS13D-214ENST00000620676 THSD1Q9NS62 852 aa4.8□□□□□ -1.64
VPS13D-214ENST00000620676 EFCAB7A8K855 629 aa4.8□□□□□ -1.64
VPS13D-214ENST00000620676 KNG1P01042 644 aa4.8□□□□□ -1.64
VPS13D-214ENST00000620676 JUNBP17275 347 aaPredicted RBP4.8□□□□□ -1.64
VPS13D-214ENST00000620676 MAOAP21397 527 aa4.8□□□□□ -1.64
VPS13D-214ENST00000620676 BDKRB1P46663 353 aa4.8□□□□□ -1.64
VPS13D-214ENST00000620676 CRISP1P54107 249 aa4.8□□□□□ -1.64
VPS13D-214ENST00000620676 PITX1P78337 314 aaPredicted RBP4.8□□□□□ -1.64
VPS13D-214ENST00000620676 SHEQ5VZ18 495 aa4.8□□□□□ -1.64
VPS13D-214ENST00000620676 SEZ6L2Q6UXD5 910 aa4.8□□□□□ -1.64
VPS13D-214ENST00000620676 LSMEM2Q8N112 164 aa4.8□□□□□ -1.64
VPS13D-214ENST00000620676 OR9A1PQ8NGU1 263 aa4.8□□□□□ -1.64
VPS13D-214ENST00000620676 PHB2Q99623 299 aa4.8□□□□□ -1.64
VPS13D-214ENST00000620676 TOLLIPQ9H0E2 274 aa4.8□□□□□ -1.64
VPS13D-214ENST00000620676 PCDHB8Q9UN66 801 aa4.8□□□□□ -1.64
VPS13D-214ENST00000620676 URADA6NGE7 173 aa4.8□□□□□ -1.64
VPS13D-214ENST00000620676 YJEFN3A6XGL0 299 aa4.8□□□□□ -1.64
VPS13D-214ENST00000620676 GTPBP1O00178 669 aaKnown RBP4.8□□□□□ -1.64
VPS13D-214ENST00000620676 NXPH3O95157 252 aa4.8□□□□□ -1.64
VPS13D-214ENST00000620676 PCDH8O95206 1070 aa4.8□□□□□ -1.64
VPS13D-214ENST00000620676 LATS1O95835 1130 aa4.8□□□□□ -1.64
VPS13D-214ENST00000620676 CTRB1P17538 263 aa4.8□□□□□ -1.64
VPS13D-214ENST00000620676 TP53I3Q53FA7 332 aa4.8□□□□□ -1.64
VPS13D-214ENST00000620676 CTRB2Q6GPI1 263 aa4.8□□□□□ -1.64
VPS13D-214ENST00000620676 C15orf52Q6ZUT6 534 aaKnown RBP4.8□□□□□ -1.64
VPS13D-214ENST00000620676 C1orf127Q8N9H9 656 aa4.8□□□□□ -1.64
VPS13D-214ENST00000620676 LSM5Q9Y4Y9 91 aaKnown RBP4.8□□□□□ -1.64
VPS13D-214ENST00000620676 STYXL1Q9Y6J8 313 aa4.8□□□□□ -1.64
VPS13D-214ENST00000620676 B4GALT4O60513 344 aa4.8□□□□□ -1.64
VPS13D-214ENST00000620676 CSF3P09919 207 aa4.8□□□□□ -1.64
VPS13D-214ENST00000620676 ITGAMP11215 1152 aa4.8□□□□□ -1.64
VPS13D-214ENST00000620676 FABP4P15090 132 aa4.8□□□□□ -1.64
VPS13D-214ENST00000620676 CD1DP15813 335 aa4.8□□□□□ -1.64
VPS13D-214ENST00000620676 ZNF25P17030 456 aaPredicted RBP4.8□□□□□ -1.64
VPS13D-214ENST00000620676 CLDN8P56748 225 aa4.8□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms