RNA–Protein interactions for RNA: ENST00000618469.1

BRCA1-228, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 718 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-228ENST00000618469 CCT7Q99832 543 aa14.72□□□□□ -0.05
BRCA1-228ENST00000618469 NXF5Q9H1B4 397 aaKnown RBP14.72□□□□□ -0.05
BRCA1-228ENST00000618469 ANKRA2Q9H9E1 313 aa14.72□□□□□ -0.05
BRCA1-228ENST00000618469 SH2D2AQ9NP31 389 aa14.72□□□□□ -0.05
BRCA1-228ENST00000618469 KCNK9Q9NPC2 374 aa14.72□□□□□ -0.05
BRCA1-228ENST00000618469 ZNF639Q9UID6 485 aa14.72□□□□□ -0.05
BRCA1-228ENST00000618469 ACTL7BQ9Y614 415 aa14.72□□□□□ -0.05
BRCA1-228ENST00000618469 PKDREJQ9NTG1 2253 aa14.72□□□□□ -0.05
BRCA1-228ENST00000618469 AKAP9Q99996 3911 aa14.72□□□□□ -0.05
BRCA1-228ENST00000618469 A0A1B0GUH1 482 aa14.71□□□□□ -0.05
BRCA1-228ENST00000618469 LSM1O15116 133 aaKnown RBP14.71□□□□□ -0.05
BRCA1-228ENST00000618469 ZNHIT1O43257 154 aa14.71□□□□□ -0.05
BRCA1-228ENST00000618469 DIAPH2O60879 1101 aa14.71□□□□□ -0.05
BRCA1-228ENST00000618469 LYPLA1O75608 230 aaPredicted RBP14.71□□□□□ -0.05
BRCA1-228ENST00000618469 ZWINTO95229 277 aa14.71□□□□□ -0.05
BRCA1-228ENST00000618469 HSPA4LO95757 839 aa14.71□□□□□ -0.05
BRCA1-228ENST00000618469 JUNP05412 331 aaKnown RBP14.71□□□□□ -0.05
BRCA1-228ENST00000618469 FGF4P08620 206 aa14.71□□□□□ -0.05
BRCA1-228ENST00000618469 ABOP16442 354 aa14.71□□□□□ -0.05
BRCA1-228ENST00000618469 SDC1P18827 310 aa14.71□□□□□ -0.05
BRCA1-228ENST00000618469 CNR1P21554 472 aa14.71□□□□□ -0.05
BRCA1-228ENST00000618469 CA7P43166 264 aa14.71□□□□□ -0.05
BRCA1-228ENST00000618469 NCBP2P52298 156 aaKnown RBP eCLIP14.71□□□□□ -0.055e-10■■■■■ 33.9
BRCA1-228ENST00000618469 CASP6P55212 293 aa14.71□□□□□ -0.05
BRCA1-228ENST00000618469 FBXW4P57775 412 aa14.71□□□□□ -0.05
BRCA1-228ENST00000618469 PPIAP62937 165 aaKnown RBP14.71□□□□□ -0.05
BRCA1-228ENST00000618469 KCNJ2P63252 427 aa14.71□□□□□ -0.05
BRCA1-228ENST00000618469 CEBPEQ15744 281 aa14.71□□□□□ -0.05
BRCA1-228ENST00000618469 NTRK2Q16620 822 aa14.71□□□□□ -0.05
BRCA1-228ENST00000618469 PRSS53Q2L4Q9 553 aa14.71□□□□□ -0.05
BRCA1-228ENST00000618469 ZNF800Q2TB10 664 aaPredicted RBP eCLIP14.71□□□□□ -0.05
BRCA1-228ENST00000618469 UGT3A2Q3SY77 523 aa14.71□□□□□ -0.05
BRCA1-228ENST00000618469 CMPK2Q5EBM0 449 aa14.71□□□□□ -0.05
BRCA1-228ENST00000618469 CES4AQ5XG92 561 aa14.71□□□□□ -0.05
BRCA1-228ENST00000618469 SLC22A10Q63ZE4 541 aa14.71□□□□□ -0.05
BRCA1-228ENST00000618469 SLC22A16Q86VW1 577 aa14.71□□□□□ -0.05
BRCA1-228ENST00000618469 HOMEZQ8IX15 550 aa14.71□□□□□ -0.05
BRCA1-228ENST00000618469 C17orf47Q8NEP4 570 aa14.71□□□□□ -0.05
BRCA1-228ENST00000618469 OR6Y1Q8NGX8 325 aa14.71□□□□□ -0.05
BRCA1-228ENST00000618469 CLHC1Q8NHS4 586 aa14.71□□□□□ -0.05
BRCA1-228ENST00000618469 EGLN2Q96KS0 407 aa14.71□□□□□ -0.05
BRCA1-228ENST00000618469 FCRL1Q96LA6 429 aa14.71□□□□□ -0.05
BRCA1-228ENST00000618469 LURAP1Q96LR2 239 aa14.71□□□□□ -0.05
BRCA1-228ENST00000618469 STMN4Q9H169 189 aaPredicted RBP14.71□□□□□ -0.05
BRCA1-228ENST00000618469 RYDENQ9NUL5 291 aaKnown RBP14.71□□□□□ -0.05
BRCA1-228ENST00000618469 TUBA8Q9NY65 449 aaPredicted RBP14.71□□□□□ -0.05
BRCA1-228ENST00000618469 PRODH2Q9UF12 536 aa14.71□□□□□ -0.05
BRCA1-228ENST00000618469 GIMAP2Q9UG22 337 aa14.71□□□□□ -0.05
BRCA1-228ENST00000618469 TINAGQ9UJW2 476 aa14.71□□□□□ -0.05
BRCA1-228ENST00000618469 WBP11Q9Y2W2 641 aaKnown RBP14.71□□□□□ -0.05
BRCA1-228ENST00000618469 NPFFR2Q9Y5X5 522 aa14.71□□□□□ -0.05
BRCA1-228ENST00000618469 CHCHD2Q9Y6H1 151 aaPredicted RBP14.71□□□□□ -0.05
BRCA1-228ENST00000618469 HIVEP1P15822 2718 aa14.7□□□□□ -0.06
BRCA1-228ENST00000618469 ZFHX3Q15911 3703 aa14.7□□□□□ -0.06
BRCA1-228ENST00000618469 CAPN14A8MX76 684 aa14.7□□□□□ -0.06
BRCA1-228ENST00000618469 MYO1GB0I1T2 1018 aa14.7□□□□□ -0.06
BRCA1-228ENST00000618469 BIRC5O15392 142 aa14.7□□□□□ -0.06
BRCA1-228ENST00000618469 SERPINE1P05121 402 aa14.7□□□□□ -0.06
BRCA1-228ENST00000618469 DHRS4L1P0CG22 281 aa14.7□□□□□ -0.06
BRCA1-228ENST00000618469 ABCD3P28288 659 aa14.7□□□□□ -0.06
BRCA1-228ENST00000618469 MPIP34949 423 aa14.7□□□□□ -0.06
BRCA1-228ENST00000618469 PLCXD2Q0VAA5 305 aa14.7□□□□□ -0.06
BRCA1-228ENST00000618469 C3AR1Q16581 482 aa14.7□□□□□ -0.06
BRCA1-228ENST00000618469 RFTN2Q52LD8 501 aaPredicted RBP14.7□□□□□ -0.06
BRCA1-228ENST00000618469 XKR7Q5GH72 579 aa14.7□□□□□ -0.06
BRCA1-228ENST00000618469 BEND6Q5SZJ8 279 aaPredicted RBP14.7□□□□□ -0.06
BRCA1-228ENST00000618469 BNC2Q6ZN30 1099 aaPredicted RBP14.7□□□□□ -0.06
BRCA1-228ENST00000618469 ANKRD42Q8N9B4 389 aa14.7□□□□□ -0.06
BRCA1-228ENST00000618469 OR7G2Q8NG99 324 aa14.7□□□□□ -0.06
BRCA1-228ENST00000618469 OR52N2Q8NGI0 321 aa14.7□□□□□ -0.06
BRCA1-228ENST00000618469 DIO2Q92813 273 aa14.7□□□□□ -0.06
BRCA1-228ENST00000618469 RELTQ969Z4 430 aa14.7□□□□□ -0.06
BRCA1-228ENST00000618469 ZDHHC2Q9UIJ5 367 aa14.7□□□□□ -0.06
BRCA1-228ENST00000618469 EXO1Q9UQ84 846 aaKnown RBP14.7□□□□□ -0.06
BRCA1-228ENST00000618469 TMED5Q9Y3A6 229 aa14.7□□□□□ -0.06
BRCA1-228ENST00000618469 ATP6AP2A0A1C7CYW4 349 aa14.69□□□□□ -0.06
BRCA1-228ENST00000618469 TMEM114B3SHH9 223 aa14.69□□□□□ -0.06
BRCA1-228ENST00000618469 CCL21O00585 134 aa14.69□□□□□ -0.06
BRCA1-228ENST00000618469 TP53I11O14683 189 aa14.69□□□□□ -0.06
BRCA1-228ENST00000618469 AKAP10O43572 662 aa14.69□□□□□ -0.06
BRCA1-228ENST00000618469 ITM2AO43736 263 aa14.69□□□□□ -0.06
BRCA1-228ENST00000618469 NME6O75414 186 aaPredicted RBP14.69□□□□□ -0.06
BRCA1-228ENST00000618469 ATP6AP2O75787 350 aa14.69□□□□□ -0.06
BRCA1-228ENST00000618469 GLSO94925 669 aaPredicted RBP14.69□□□□□ -0.06
BRCA1-228ENST00000618469 BGNP21810 368 aa14.69□□□□□ -0.06
BRCA1-228ENST00000618469 MC3RP41968 323 aa14.69□□□□□ -0.06
BRCA1-228ENST00000618469 MAGEA5P43359 124 aa14.69□□□□□ -0.06
BRCA1-228ENST00000618469 EMDP50402 254 aa14.69□□□□□ -0.06
BRCA1-228ENST00000618469 ZNF155Q12901 538 aaPredicted RBP14.69□□□□□ -0.06
BRCA1-228ENST00000618469 MPP2Q14168 576 aa14.69□□□□□ -0.06
BRCA1-228ENST00000618469 ANKRD26P1Q6NSI1 321 aa14.69□□□□□ -0.06
BRCA1-228ENST00000618469 TMEM107Q6UX40 140 aa14.69□□□□□ -0.06
BRCA1-228ENST00000618469 FGD2Q7Z6J4 655 aa14.69□□□□□ -0.06
BRCA1-228ENST00000618469 SPPL2CQ8IUH8 684 aa14.69□□□□□ -0.06
BRCA1-228ENST00000618469 CHERPQ8IWX8 916 aaKnown RBP14.69□□□□□ -0.06
BRCA1-228ENST00000618469 FAM109AQ8N4B1 249 aa14.69□□□□□ -0.06
BRCA1-228ENST00000618469 TMEM251Q8N6I4 163 aa14.69□□□□□ -0.06
BRCA1-228ENST00000618469 ERP27Q96DN0 273 aa14.69□□□□□ -0.06
BRCA1-228ENST00000618469 OMA1Q96E52 524 aa14.69□□□□□ -0.06
BRCA1-228ENST00000618469 LCORQ96JN0 433 aaPredicted RBP14.69□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 72.2 ms