RNA–Protein interactions for RNA: ENST00000618262.4

SRRT-216, Transcript of serrate, RNA effector molecule, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SRRT, Length 2,955 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRT-216ENST00000618262 LATS2Q9NRM7 1088 aa11.43□□□□□ -0.58
SRRT-216ENST00000618262 BTNL2Q9UIR0 455 aa11.43□□□□□ -0.58
SRRT-216ENST00000618262 A0A096LPK6 155 aa11.42□□□□□ -0.58
SRRT-216ENST00000618262 PRMT5O14744 637 aaPredicted RBP11.42□□□□□ -0.58
SRRT-216ENST00000618262 ZNF7P17097 686 aaPredicted RBP11.42□□□□□ -0.58
SRRT-216ENST00000618262 MSX1P28360 303 aa11.42□□□□□ -0.58
SRRT-216ENST00000618262 IL12AP29459 219 aa11.42□□□□□ -0.58
SRRT-216ENST00000618262 CCR7P32248 378 aa11.42□□□□□ -0.58
SRRT-216ENST00000618262 SPRP35270 261 aaPredicted RBP11.42□□□□□ -0.58
SRRT-216ENST00000618262 SLC18A1P54219 525 aa11.42□□□□□ -0.58
SRRT-216ENST00000618262 ZNF181Q2M3W8 571 aa11.42□□□□□ -0.58
SRRT-216ENST00000618262 HSD17B12Q53GQ0 312 aa11.42□□□□□ -0.58
SRRT-216ENST00000618262 AKIRIN2Q53H80 203 aa11.42□□□□□ -0.58
SRRT-216ENST00000618262 KIAA1161Q6NSJ0 714 aa11.42□□□□□ -0.58
SRRT-216ENST00000618262 RPUSD3Q6P087 351 aaKnown RBP11.42□□□□□ -0.58
SRRT-216ENST00000618262 TTC33Q6PID6 262 aaPredicted RBP11.42□□□□□ -0.58
SRRT-216ENST00000618262 ADGRD1Q6QNK2 874 aa11.42□□□□□ -0.58
SRRT-216ENST00000618262 RPS27LQ71UM5 84 aaKnown RBP11.42□□□□□ -0.58
SRRT-216ENST00000618262 SZRD1Q7Z422 152 aa11.42□□□□□ -0.58
SRRT-216ENST00000618262 ANKRD46Q86W74 232 aa11.42□□□□□ -0.58
SRRT-216ENST00000618262 ZNF761Q86XN6 746 aaPredicted RBP11.42□□□□□ -0.58
SRRT-216ENST00000618262 PATE1Q8WXA2 126 aa11.42□□□□□ -0.58
SRRT-216ENST00000618262 PTDSS2Q9BVG9 487 aa11.42□□□□□ -0.58
SRRT-216ENST00000618262 COPZ2Q9P299 210 aa11.42□□□□□ -0.58
SRRT-216ENST00000618262 PIKFYVEQ9Y2I7 2098 aa11.42□□□□□ -0.58
SRRT-216ENST00000618262 A0A1B0GVT2 93 aa11.42□□□□□ -0.58
SRRT-216ENST00000618262 A0A1W2PPC4 97 aa11.42□□□□□ -0.58
SRRT-216ENST00000618262 DFNA5O60443 496 aa11.42□□□□□ -0.58
SRRT-216ENST00000618262 SLC22A5O76082 557 aa11.42□□□□□ -0.58
SRRT-216ENST00000618262 ABHD2P08910 425 aa11.42□□□□□ -0.58
SRRT-216ENST00000618262 TRAPPC2P0DI81 140 aa11.42□□□□□ -0.58
SRRT-216ENST00000618262 TRAPPC2BP0DI82 140 aa11.42□□□□□ -0.58
SRRT-216ENST00000618262 CCT3P49368 545 aaKnown RBP11.42□□□□□ -0.58
SRRT-216ENST00000618262 LIMK2P53671 638 aa11.42□□□□□ -0.58
SRRT-216ENST00000618262 TBCCQ15814 346 aa11.42□□□□□ -0.58
SRRT-216ENST00000618262 PTCHD4Q6ZW05 846 aa11.42□□□□□ -0.58
SRRT-216ENST00000618262 ZNF781Q8N8C0 355 aa11.42□□□□□ -0.58
SRRT-216ENST00000618262 OR1E3Q8WZA6 343 aa11.42□□□□□ -0.58
SRRT-216ENST00000618262 NXNL1Q96CM4 212 aa11.42□□□□□ -0.58
SRRT-216ENST00000618262 BSCL2Q96G97 398 aaPredicted RBP11.42□□□□□ -0.58
SRRT-216ENST00000618262 CCDC74BQ96LY2 380 aa11.42□□□□□ -0.58
SRRT-216ENST00000618262 FBRSQ9HAH7 460 aa11.42□□□□□ -0.58
SRRT-216ENST00000618262 IL1RAPQ9NPH3 570 aa11.42□□□□□ -0.58
SRRT-216ENST00000618262 PLSCR4Q9NRQ2 329 aa11.42□□□□□ -0.58
SRRT-216ENST00000618262 ZDHHC3Q9NYG2 299 aa11.42□□□□□ -0.58
SRRT-216ENST00000618262 SLC17A7Q9P2U7 560 aa11.42□□□□□ -0.58
SRRT-216ENST00000618262 IKZF3Q9UKT9 509 aa11.42□□□□□ -0.58
SRRT-216ENST00000618262 POMPQ9Y244 141 aa11.42□□□□□ -0.58
SRRT-216ENST00000618262 PI4KAP42356 2102 aa11.41□□□□□ -0.58
SRRT-216ENST00000618262 OR52A4PA6NMU1 304 aa11.41□□□□□ -0.58
SRRT-216ENST00000618262 GATBO75879 557 aaKnown RBP11.41□□□□□ -0.58
SRRT-216ENST00000618262 C2P06681 752 aa11.41□□□□□ -0.58
SRRT-216ENST00000618262 GSTP1P09211 210 aaKnown RBP11.41□□□□□ -0.58
SRRT-216ENST00000618262 EEF1B2P24534 225 aaKnown RBP11.41□□□□□ -0.58
SRRT-216ENST00000618262 TLX1P31314 330 aaPredicted RBP11.41□□□□□ -0.58
SRRT-216ENST00000618262 AKT2P31751 481 aa11.41□□□□□ -0.58
SRRT-216ENST00000618262 ALDH3A2P51648 485 aa11.41□□□□□ -0.58
SRRT-216ENST00000618262 TIAL1Q01085 375 aaKnown RBP eCLIP11.41□□□□□ -0.58
SRRT-216ENST00000618262 MBOAT1Q6ZNC8 495 aa11.41□□□□□ -0.58
SRRT-216ENST00000618262 FAM83HQ6ZRV2 1179 aaPredicted RBP11.41□□□□□ -0.58
SRRT-216ENST00000618262 CYS1Q717R9 158 aa11.41□□□□□ -0.58
SRRT-216ENST00000618262 SLCO6A1Q86UG4 719 aa11.41□□□□□ -0.58
SRRT-216ENST00000618262 RETREG3Q86VR2 466 aa11.41□□□□□ -0.58
SRRT-216ENST00000618262 KRT78Q8N1N4 520 aa11.41□□□□□ -0.58
SRRT-216ENST00000618262 CELF2-AS1Q8N7Q2 184 aa11.41□□□□□ -0.58
SRRT-216ENST00000618262 YIPF4Q9BSR8 244 aa11.41□□□□□ -0.58
SRRT-216ENST00000618262 MECRQ9BV79 373 aa11.41□□□□□ -0.58
SRRT-216ENST00000618262 SHARPINQ9H0F6 387 aa11.41□□□□□ -0.58
SRRT-216ENST00000618262 OR51V1Q9H2C8 321 aa11.41□□□□□ -0.58
SRRT-216ENST00000618262 RHOJQ9H4E5 214 aa11.41□□□□□ -0.58
SRRT-216ENST00000618262 COPG2Q9UBF2 871 aa11.41□□□□□ -0.58
SRRT-216ENST00000618262 METTL21EPA6NDL7 271 aa11.41□□□□□ -0.58
SRRT-216ENST00000618262 NEMP2A6NFY4 417 aa11.41□□□□□ -0.58
SRRT-216ENST00000618262 METTL12A8MUP2 240 aa11.41□□□□□ -0.58
SRRT-216ENST00000618262 PRPF4O43172 522 aaKnown RBP eCLIP11.41□□□□□ -0.58
SRRT-216ENST00000618262 RFPL1O75677 317 aa11.41□□□□□ -0.58
SRRT-216ENST00000618262 SP9P0CG40 484 aa11.41□□□□□ -0.58
SRRT-216ENST00000618262 JUNDP17535 347 aa11.41□□□□□ -0.58
SRRT-216ENST00000618262 RPA3P35244 121 aaPredicted RBP11.41□□□□□ -0.58
SRRT-216ENST00000618262 SLC18A2Q05940 514 aa11.41□□□□□ -0.58
SRRT-216ENST00000618262 AP5B1Q2VPB7 878 aa11.41□□□□□ -0.58
SRRT-216ENST00000618262 PRRT3Q5FWE3 981 aa11.41□□□□□ -0.58
SRRT-216ENST00000618262 YOD1Q5VVQ6 348 aaPredicted RBP11.41□□□□□ -0.58
SRRT-216ENST00000618262 LIPJQ5W064 366 aa11.41□□□□□ -0.58
SRRT-216ENST00000618262 RFT1Q96AA3 541 aa11.41□□□□□ -0.58
SRRT-216ENST00000618262 DDX31Q9H8H2 851 aaKnown RBP11.41□□□□□ -0.58
SRRT-216ENST00000618262 BABAM2Q9NXR7 383 aa11.41□□□□□ -0.58
SRRT-216ENST00000618262 PISDQ9UG56 409 aa11.41□□□□□ -0.58
SRRT-216ENST00000618262 IL19Q9UHD0 177 aa11.41□□□□□ -0.58
SRRT-216ENST00000618262 RIMS3Q9UJD0 308 aa11.41□□□□□ -0.58
SRRT-216ENST00000618262 KCND3Q9UK17 655 aa11.41□□□□□ -0.58
SRRT-216ENST00000618262 CEACAM5P06731 702 aa11.4□□□□□ -0.58
SRRT-216ENST00000618262 IGFBP1P08833 259 aaPredicted RBP11.4□□□□□ -0.58
SRRT-216ENST00000618262 NSG1P42857 185 aa11.4□□□□□ -0.58
SRRT-216ENST00000618262 GMFBP60983 142 aa11.4□□□□□ -0.58
SRRT-216ENST00000618262 NFKB2Q00653 900 aa11.4□□□□□ -0.58
SRRT-216ENST00000618262 SLC36A3Q495N2 470 aa11.4□□□□□ -0.58
SRRT-216ENST00000618262 GPAT3Q53EU6 434 aa11.4□□□□□ -0.58
SRRT-216ENST00000618262 OR2B11Q5JQS5 317 aa11.4□□□□□ -0.58
SRRT-216ENST00000618262 PIWIL3Q7Z3Z3 882 aaKnown RBP11.4□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms