RNA–Protein interactions for RNA: ENST00000617641.4

PCDHGC3-205, Transcript of protocadherin gamma subfamily C, 3, humanhuman

TSL 1 (best) BASIC

Gene PCDHGC3, Length 2,346 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3-205ENST00000617641 LMO7DNF2Z398 122 aa16.25■□□□□ 0.19
PCDHGC3-205ENST00000617641 CBLP22681 906 aa16.25■□□□□ 0.19
PCDHGC3-205ENST00000617641 SMN1Q16637 294 aaKnown RBP16.25■□□□□ 0.19
PCDHGC3-205ENST00000617641 ATAD3BQ5T9A4 648 aa16.25■□□□□ 0.19
PCDHGC3-205ENST00000617641 CLVS1Q8IUQ0 354 aaPredicted RBP16.25■□□□□ 0.19
PCDHGC3-205ENST00000617641 SPARTQ8N0X7 666 aa16.25■□□□□ 0.19
PCDHGC3-205ENST00000617641 DNAJC22Q8N4W6 341 aa16.25■□□□□ 0.19
PCDHGC3-205ENST00000617641 SLC9A6Q92581 669 aa16.25■□□□□ 0.19
PCDHGC3-205ENST00000617641 ZNF566Q969W8 418 aa16.25■□□□□ 0.19
PCDHGC3-205ENST00000617641 ZG16BQ96DA0 208 aa16.25■□□□□ 0.19
PCDHGC3-205ENST00000617641 PSD2Q9BQI7 771 aa16.25■□□□□ 0.19
PCDHGC3-205ENST00000617641 UCK1Q9HA47 277 aa16.25■□□□□ 0.19
PCDHGC3-205ENST00000617641 ZNF556Q9HAH1 456 aa16.25■□□□□ 0.19
PCDHGC3-205ENST00000617641 ANKHQ9HCJ1 492 aa16.25■□□□□ 0.19
PCDHGC3-205ENST00000617641 GIN1Q9NXP7 522 aa16.25■□□□□ 0.19
PCDHGC3-205ENST00000617641 A8MVJ9 347 aa16.24■□□□□ 0.19
PCDHGC3-205ENST00000617641 K7ESF4 209 aa16.24■□□□□ 0.19
PCDHGC3-205ENST00000617641 MED26O95402 600 aa16.24■□□□□ 0.19
PCDHGC3-205ENST00000617641 ZIC2O95409 532 aaPredicted RBP16.24■□□□□ 0.19
PCDHGC3-205ENST00000617641 CPNE6O95741 557 aa16.24■□□□□ 0.19
PCDHGC3-205ENST00000617641 GASTP01350 101 aa16.24■□□□□ 0.19
PCDHGC3-205ENST00000617641 CCDC159P0C7I6 412 aa16.24■□□□□ 0.19
PCDHGC3-205ENST00000617641 CXCL12P48061 93 aa16.24■□□□□ 0.19
PCDHGC3-205ENST00000617641 GFERP55789 205 aa16.24■□□□□ 0.19
PCDHGC3-205ENST00000617641 SEC23BQ15437 767 aa16.24■□□□□ 0.19
PCDHGC3-205ENST00000617641 ZNF628Q5EBL2 1059 aa16.24■□□□□ 0.19
PCDHGC3-205ENST00000617641 PRAMEF8Q5VWM4 474 aa16.24■□□□□ 0.19
PCDHGC3-205ENST00000617641 PRAMEF7Q5VXH5 474 aa16.24■□□□□ 0.19
PCDHGC3-205ENST00000617641 XAF1Q6GPH4 301 aa16.24■□□□□ 0.19
PCDHGC3-205ENST00000617641 B3GNT6Q6ZMB0 384 aa16.24■□□□□ 0.19
PCDHGC3-205ENST00000617641 C17orf82Q86X59 251 aaPredicted RBP16.24■□□□□ 0.19
PCDHGC3-205ENST00000617641 CDS1Q92903 461 aa16.24■□□□□ 0.19
PCDHGC3-205ENST00000617641 TRNT1Q96Q11 434 aaKnown RBP16.24■□□□□ 0.19
PCDHGC3-205ENST00000617641 LDHAL6BQ9BYZ2 381 aaPredicted RBP16.24■□□□□ 0.19
PCDHGC3-205ENST00000617641 CXorf21Q9HAI6 301 aa16.24■□□□□ 0.19
PCDHGC3-205ENST00000617641 PTTG2Q9NZH5 202 aa16.24■□□□□ 0.19
PCDHGC3-205ENST00000617641 PTGFRNQ9P2B2 879 aa16.24■□□□□ 0.19
PCDHGC3-205ENST00000617641 THADAQ6YHU6 1953 aa16.24■□□□□ 0.19
PCDHGC3-205ENST00000617641 PCDHGA12O60330 932 aa16.24■□□□□ 0.19
PCDHGC3-205ENST00000617641 GPR75O95800 540 aa16.24■□□□□ 0.19
PCDHGC3-205ENST00000617641 LGI1O95970 557 aa16.24■□□□□ 0.19
PCDHGC3-205ENST00000617641 H1F0P07305 194 aaKnown RBP16.24■□□□□ 0.19
PCDHGC3-205ENST00000617641 ELAVL4P26378 380 aaKnown RBP16.24■□□□□ 0.19
PCDHGC3-205ENST00000617641 SLC5A2P31639 672 aa16.24■□□□□ 0.19
PCDHGC3-205ENST00000617641 PDX1P52945 283 aa16.24■□□□□ 0.19
PCDHGC3-205ENST00000617641 PIN1Q13526 163 aaPredicted RBP16.24■□□□□ 0.19
PCDHGC3-205ENST00000617641 PRTGQ2VWP7 1150 aa16.24■□□□□ 0.19
PCDHGC3-205ENST00000617641 FAM214AQ32MH5 1076 aa16.24■□□□□ 0.19
PCDHGC3-205ENST00000617641 ZNF770Q6IQ21 691 aaPredicted RBP16.24■□□□□ 0.19
PCDHGC3-205ENST00000617641 CDC73Q6P1J9 531 aa16.24■□□□□ 0.19
PCDHGC3-205ENST00000617641 SLC36A4Q6YBV0 504 aa16.24■□□□□ 0.19
PCDHGC3-205ENST00000617641 ENTHD1Q8IYW4 607 aa16.24■□□□□ 0.19
PCDHGC3-205ENST00000617641 OR6T1Q8NGN1 323 aa16.24■□□□□ 0.19
PCDHGC3-205ENST00000617641 DHRS1Q96LJ7 313 aa16.24■□□□□ 0.19
PCDHGC3-205ENST00000617641 TGM7Q96PF1 710 aa16.24■□□□□ 0.19
PCDHGC3-205ENST00000617641 ACAD8Q9UKU7 415 aa16.24■□□□□ 0.19
PCDHGC3-205ENST00000617641 A4GNTQ9UNA3 340 aa16.24■□□□□ 0.19
PCDHGC3-205ENST00000617641 CDC14AQ9UNH5 594 aa16.24■□□□□ 0.19
PCDHGC3-205ENST00000617641 LIPT1Q9Y234 373 aa16.24■□□□□ 0.19
PCDHGC3-205ENST00000617641 SLC9A8Q9Y2E8 581 aa16.24■□□□□ 0.19
PCDHGC3-205ENST00000617641 A0A0A6YYC8 382 aaPredicted RBP16.23■□□□□ 0.19
PCDHGC3-205ENST00000617641 I3L1I5 382 aaPredicted RBP16.23■□□□□ 0.19
PCDHGC3-205ENST00000617641 NT5EP21589 574 aa16.23■□□□□ 0.19
PCDHGC3-205ENST00000617641 GGT2P36268 569 aa16.23■□□□□ 0.19
PCDHGC3-205ENST00000617641 RAB38P57729 211 aa16.23■□□□□ 0.19
PCDHGC3-205ENST00000617641 NUP107P57740 925 aa16.23■□□□□ 0.19
PCDHGC3-205ENST00000617641 FHL5Q5TD97 284 aa16.23■□□□□ 0.19
PCDHGC3-205ENST00000617641 VRK2Q86Y07 508 aa16.23■□□□□ 0.19
PCDHGC3-205ENST00000617641 PINK1Q9BXM7 581 aa16.23■□□□□ 0.19
PCDHGC3-205ENST00000617641 RBCK1Q9BYM8 510 aa16.23■□□□□ 0.19
PCDHGC3-205ENST00000617641 ADAP2Q9NPF8 381 aa16.23■□□□□ 0.19
PCDHGC3-205ENST00000617641 DNAAF2Q9NVR5 837 aaKnown RBP16.23■□□□□ 0.19
PCDHGC3-205ENST00000617641 TMCC3Q9ULS5 477 aa16.23■□□□□ 0.19
PCDHGC3-205ENST00000617641 SIT1Q9Y3P8 196 aa16.23■□□□□ 0.19
PCDHGC3-205ENST00000617641 DSPPQ9NZW4 1301 aa16.23■□□□□ 0.19
PCDHGC3-205ENST00000617641 ARRDC5A6NEK1 342 aa16.23■□□□□ 0.19
PCDHGC3-205ENST00000617641 CHST10O43529 356 aa16.23■□□□□ 0.19
PCDHGC3-205ENST00000617641 FCMRO60667 390 aa16.23■□□□□ 0.19
PCDHGC3-205ENST00000617641 ATP1B1P05026 303 aa16.23■□□□□ 0.19
PCDHGC3-205ENST00000617641 ALPPP05187 535 aa16.23■□□□□ 0.19
PCDHGC3-205ENST00000617641 ACP2P11117 423 aa16.23■□□□□ 0.19
PCDHGC3-205ENST00000617641 DUSP5Q16690 384 aa16.23■□□□□ 0.19
PCDHGC3-205ENST00000617641 ZNF311Q5JNZ3 666 aa16.23■□□□□ 0.19
PCDHGC3-205ENST00000617641 MLIPQ5VWP3 458 aa16.23■□□□□ 0.19
PCDHGC3-205ENST00000617641 NKAIN2Q5VXU1 208 aa16.23■□□□□ 0.19
PCDHGC3-205ENST00000617641 HEPHL1Q6MZM0 1159 aa16.23■□□□□ 0.19
PCDHGC3-205ENST00000617641 FAM81AQ8TBF8 368 aa16.23■□□□□ 0.19
PCDHGC3-205ENST00000617641 TANKQ92844 425 aa16.23■□□□□ 0.19
PCDHGC3-205ENST00000617641 ANKRD9Q96BM1 317 aaPredicted RBP16.23■□□□□ 0.19
PCDHGC3-205ENST00000617641 TCTN2Q96GX1 697 aa16.23■□□□□ 0.19
PCDHGC3-205ENST00000617641 NODALQ96S42 347 aa16.23■□□□□ 0.19
PCDHGC3-205ENST00000617641 RHNO1Q9BSD3 238 aa16.23■□□□□ 0.19
PCDHGC3-205ENST00000617641 CCDC90BQ9GZT6 254 aa16.23■□□□□ 0.19
PCDHGC3-205ENST00000617641 VCX3AQ9NNX9 186 aa16.23■□□□□ 0.19
PCDHGC3-205ENST00000617641 C19orf53Q9UNZ5 99 aaPredicted RBP16.23■□□□□ 0.19
PCDHGC3-205ENST00000617641 RNF6Q9Y252 685 aa16.23■□□□□ 0.19
PCDHGC3-205ENST00000617641 DUXAA6NLW8 204 aa16.22■□□□□ 0.19
PCDHGC3-205ENST00000617641 AHCYL1O43865 530 aa16.22■□□□□ 0.19
PCDHGC3-205ENST00000617641 WBP4O75554 376 aaKnown RBP16.22■□□□□ 0.19
PCDHGC3-205ENST00000617641 PIAS2O75928 621 aa16.22■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms